Works matching IS 1553734X AND DT 2015 AND VI 11 AND IP 7

Results: 39

Asynchronous Rate Chaos in Spiking Neuronal Circuits.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 7, p. 1, doi. 10.1371/journal.pcbi.1004266

By:

Harish, Omri;
Hansel, David

Publication type:

Article

Spike-Triggered Covariance Analysis Reveals Phenomenological Diversity of Contrast Adaptation in the Retina.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 7, p. 1, doi. 10.1371/journal.pcbi.1004425

By:

Liu, Jian K.;
Gollisch, Tim

Publication type:

Article

Interdomain Contacts Control Native State Switching of RfaH on a Dual-Funneled Landscape.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 7, p. 1, doi. 10.1371/journal.pcbi.1004379

By:

Ramírez-Sarmiento, César A.;
Noel, Jeffrey K.;
Valenzuela, Sandro L.;
Artsimovitch, Irina

Publication type:

Article

Forecasting Influenza Epidemics in Hong Kong.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 7, p. 1, doi. 10.1371/journal.pcbi.1004383

By:

Yang, Wan;
Cowling, Benjamin J.;
Lau, Eric H. Y.;
Shaman, Jeffrey

Publication type:

Article

Fast Simulation of Mechanical Heterogeneity in the Electrically Asynchronous Heart Using the MultiPatch Module.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 7, p. 1, doi. 10.1371/journal.pcbi.1004284

By:

Walmsley, John;
Arts, Theo;
Derval, Nicolas;
Bordachar, Pierre;
Cochet, Hubert;
Ploux, Sylvain;
Prinzen, Frits W.;
Delhaas, Tammo;
Lumens, Joost

Publication type:

Article

Optimal Prediction of Moving Sound Source Direction in the Owl.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 7, p. 1, doi. 10.1371/journal.pcbi.1004360

By:

Cox, Weston;
Fischer, Brian J.

Publication type:

Article

Learning the Structure of Biomedical Relationships from Unstructured Text.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 7, p. 1, doi. 10.1371/journal.pcbi.1004216

By:

Percha, Bethany;
Altman, Russ B.

Publication type:

Article

Decreasing-Rate Pruning Optimizes the Construction of Efficient and Robust Distributed Networks.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 7, p. 1, doi. 10.1371/journal.pcbi.1004347

By:

Navlakha, Saket;
Barth, Alison L.;
Bar-Joseph, Ziv

Publication type:

Article

Nullspace Sampling with Holonomic Constraints Reveals Molecular Mechanisms of Protein Gαs.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 7, p. 1, doi. 10.1371/journal.pcbi.1004361

By:

Pachov, Dimitar V.;
van den Bedem, Henry

Publication type:

Article

Inferring Pairwise Interactions from Biological Data Using Maximum-Entropy Probability Models.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 7, p. 1, doi. 10.1371/journal.pcbi.1004182

By:

Stein, Richard R.;
Marks, Debora S.;
Sander, Chris

Publication type:

Article

Neutral Models of Microbiome Evolution.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 7, p. 1, doi. 10.1371/journal.pcbi.1004365

By:

Zeng, Qinglong;
Sukumaran, Jeet;
Wu, Steven;
Rodrigo, Allen

Publication type:

Article

Timing and Variability of Galactose Metabolic Gene Activation Depend on the Rate of Environmental Change.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 7, p. 1, doi. 10.1371/journal.pcbi.1004399

By:

Nguyen-Huu, Truong D.;
Gupta, Chinmaya;
Ma, Bo;
Ott, William;
Josić, Krešimir;
Bennett, Matthew R.

Publication type:

Article

What Can Interaction Webs Tell Us About Species Roles?

Published in:

PLoS Computational Biology, 2015, v. 11, n. 7, p. 1, doi. 10.1371/journal.pcbi.1004330

By:

Sander, Elizabeth L.;
Wootton, J. Timothy;
Allesina, Stefano

Publication type:

Article

Dynamical Localization of DivL and PleC in the Asymmetric Division Cycle of Caulobacter crescentus: A Theoretical Investigation of Alternative Models.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 7, p. 1, doi. 10.1371/journal.pcbi.1004348

By:

Subramanian, Kartik;
Paul, Mark R.;
Tyson, John J.

Publication type:

Article

Quantitative Analysis of the Association Angle between T-cell Receptor Vα/Vβ Domains Reveals Important Features for Epitope Recognition.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 7, p. 1, doi. 10.1371/journal.pcbi.1004244

By:

Hoffmann, Thomas;
Krackhardt, Angela M.;
Antes, Iris

Publication type:

Article

Identification of Ohnolog Genes Originating from Whole Genome Duplication in Early Vertebrates, Based on Synteny Comparison across Multiple Genomes.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 7, p. 1, doi. 10.1371/journal.pcbi.1004394

By:

Singh, Param Priya;
Arora, Jatin;
Isambert, Hervé

Publication type:

Article

Hydrophobic Gating of Ion Permeation in Magnesium Channel CorA.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 7, p. 1, doi. 10.1371/journal.pcbi.1004303

By:

Neale, Chris;
Chakrabarti, Nilmadhab;
Pomorski, Pawel;
Pai, Emil F.;
Pomès, Régis

Publication type:

Article

Markov State Models Reveal a Two-Step Mechanism of miRNA Loading into the Human Argonaute Protein: Selective Binding followed by Structural Re-arrangement.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 7, p. 1, doi. 10.1371/journal.pcbi.1004404

By:

Jiang, Hanlun;
Sheong, Fu Kit;
Zhu, Lizhe;
Gao, Xin;
Bernauer, Julie;
Huang, Xuhui

Publication type:

Article

Emergence of Slow-Switching Assemblies in Structured Neuronal Networks.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 7, p. 1, doi. 10.1371/journal.pcbi.1004196

By:

Schaub, Michael T.;
Billeh, Yazan N.;
Anastassiou, Costas A.;
Koch, Christof;
Barahona, Mauricio

Publication type:

Article

Adaptive Synaptogenesis Constructs Neural Codes That Benefit Discrimination.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 7, p. 1, doi. 10.1371/journal.pcbi.1004299

By:

Thomas, Blake T.;
Blalock, Davis W.;
Levy, William B.

Publication type:

Article

A Developmental Switch for Hebbian Plasticity.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 7, p. 1, doi. 10.1371/journal.pcbi.1004386

By:

Martens, Marijn B.;
Celikel, Tansu;
Tiesinga, Paul H. E.

Publication type:

Article

Modeling Inhibitory Interneurons in Efficient Sensory Coding Models.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 7, p. 1, doi. 10.1371/journal.pcbi.1004353

By:

Zhu, Mengchen;
Rozell, Christopher J.

Publication type:

Article

Geometry of the Gene Expression Space of Individual Cells.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 7, p. 1, doi. 10.1371/journal.pcbi.1004224

By:

Korem, Yael;
Szekely, Pablo;
Hart, Yuval;
Sheftel, Hila;
Hausser, Jean;
Mayo, Avi;
Rothenberg, Michael E.;
Kalisky, Tomer;
Alon, Uri

Publication type:

Article

Heterogeneous Network Edge Prediction: A Data Integration Approach to Prioritize Disease-Associated Genes.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 7, p. 1, doi. 10.1371/journal.pcbi.1004259

By:

Himmelstein, Daniel S.;
Baranzini, Sergio E.

Publication type:

Article

A Computational Model of a Descending Mechanosensory Pathway Involved in Active Tactile Sensing.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 7, p. 1, doi. 10.1371/journal.pcbi.1004263

By:

Ache, Jan M.;
Dürr, Volker

Publication type:

Article

A Diffusive Homeostatic Signal Maintains Neural Heterogeneity and Responsiveness in Cortical Networks.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 7, p. 1, doi. 10.1371/journal.pcbi.1004389

By:

Sweeney, Yann;
Hellgren Kotaleski, Jeanette;
Hennig, Matthias H.

Publication type:

Article

Design of Protein Multi-specificity Using an Independent Sequence Search Reduces the Barrier to Low Energy Sequences.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 7, p. 1, doi. 10.1371/journal.pcbi.1004300

By:

Sevy, Alexander M.;
Jacobs, Tim M.;
Jr.Crowe, James E.;
Meiler, Jens

Publication type:

Article

How Co-translational Folding of Multi-domain Protein Is Affected by Elongation Schedule: Molecular Simulations.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 7, p. 1, doi. 10.1371/journal.pcbi.1004356

By:

Tanaka, Tomohiro;
Hori, Naoto;
Takada, Shoji

Publication type:

Article

Thermodynamics and H<sub>2</sub> Transfer in a Methanogenic, Syntrophic Community.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 7, p. 1, doi. 10.1371/journal.pcbi.1004364

By:

Hamilton, Joshua J.;
Calixto Contreras, Montserrat;
Reed, Jennifer L.

Publication type:

Article

Correction: An Integrative Approach for Modeling and Simulation of Heterocyst Pattern Formation in Cyanobacteria Filaments.

Published in:

2015

By:

null, null

Publication type:

Correction Notice

Stability of Neuronal Networks with Homeostatic Regulation.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 7, p. 1, doi. 10.1371/journal.pcbi.1004357

By:

Harnack, Daniel;
Pelko, Miha;
Chaillet, Antoine;
Chitour, Yacine;
van Rossum, Mark C.W.

Publication type:

Article

Predicting Binding Free Energy Change Caused by Point Mutations with Knowledge-Modified MM/PBSA Method.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 7, p. 1, doi. 10.1371/journal.pcbi.1004276

By:

Petukh, Marharyta;
Li, Minghui;
Alexov, Emil

Publication type:

Article

Genome Modeling System: A Knowledge Management Platform for Genomics.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 7, p. 1, doi. 10.1371/journal.pcbi.1004274

By:

Griffith, Malachi;
Griffith, Obi L.;
Smith, Scott M.;
Ramu, Avinash;
Callaway, Matthew B.;
Brummett, Anthony M.;
Kiwala, Michael J.;
Coffman, Adam C.;
Regier, Allison A.;
Oberkfell, Ben J.;
Sanderson, Gabriel E.;
Mooney, Thomas P.;
Nutter, Nathaniel G.;
Belter, Edward A.;
Du, Feiyu;
Long, Robert L.;
Abbott, Travis E.;
Ferguson, Ian T.;
Morton, David L.;
Burnett, Mark M.

Publication type:

Article

Evaluating Spatial Interaction Models for Regional Mobility in Sub-Saharan Africa.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 7, p. 1, doi. 10.1371/journal.pcbi.1004267

By:

Wesolowski, Amy;
O’Meara, Wendy Prudhomme;
Eagle, Nathan;
Tatem, Andrew J.;
Buckee, Caroline O.

Publication type:

Article

Measuring Asymmetry in Time-Stamped Phylogenies.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 7, p. 1, doi. 10.1371/journal.pcbi.1004312

By:

Dearlove, Bethany L.;
Frost, Simon D. W.

Publication type:

Article

From “What Is?” to “What Isn't?” Computational Biology.

Published in:

2015

By:

Nussinov, Ruth;
Bonhoeffer, Sebastian;
Papin, Jason A.;
Sporns, Olaf

Publication type:

Editorial

Structural Model of RNA Polymerase II Elongation Complex with Complete Transcription Bubble Reveals NTP Entry Routes.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 7, p. 1, doi. 10.1371/journal.pcbi.1004354

By:

Zhang, Lu;
Silva, Daniel-Adriano;
Pardo-Avila, Fátima;
Wang, Dong;
Huang, Xuhui

Publication type:

Article

High Accuracy Decoding of Dynamical Motion from a Large Retinal Population.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 7, p. 1, doi. 10.1371/journal.pcbi.1004304

By:

Marre, Olivier;
Botella-Soler, Vicente;
Simmons, Kristina D.;
Mora, Thierry;
Tkačik, Gašper;
IIBerry, Michael J.

Publication type:

Article

Rigidity Emerges during Antibody Evolution in Three Distinct Antibody Systems: Evidence from QSFR Analysis of Fab Fragments.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 7, p. 1, doi. 10.1371/journal.pcbi.1004327

By:

Li, Tong;
Tracka, Malgorzata B.;
Uddin, Shahid;
Casas-Finet, Jose;
Jacobs, Donald J.;
Livesay, Dennis R.

Publication type:

Article