Works matching IS 1553734X AND DT 2014 AND VI 10 AND IP 1

Results: 53

Building the Future of Bioinformatics through Student-Facilitated Conferencing.

Published in:

PLoS Computational Biology, 2014, v. 10, n. 1, p. 1, doi. 10.1371/journal.pcbi.1003458

By:

Ramdayal, Kavisha;
Stobbe, Miranda D.;
Mishra, Tarun;
Michaut, Magali

Publication type:

Article

Bayesian Reconstruction of Disease Outbreaks by Combining Epidemiologic and Genomic Data.

Published in:

PLoS Computational Biology, 2014, v. 10, n. 1, p. 1, doi. 10.1371/journal.pcbi.1003457

By:

Jombart, Thibaut;
Cori, Anne;
Didelot, Xavier;
Cauchemez, Simon;
Fraser, Christophe;
Ferguson, Neil

Publication type:

Article

A Model for the Epigenetic Switch Linking Inflammation to Cell Transformation: Deterministic and Stochastic Approaches.

Published in:

PLoS Computational Biology, 2014, v. 10, n. 1, p. 1, doi. 10.1371/journal.pcbi.1003455

By:

Gérard, Claude;
Gonze, Didier;
Lemaigre, Frédéric;
Novák, Béla

Publication type:

Article

Ten Simple Rules for Writing Research Papers.

Published in:

2014

By:

Zhang, Weixiong

Publication type:

Editorial

Global Patterns of Protein Domain Gain and Loss in Superkingdoms.

Published in:

PLoS Computational Biology, 2014, v. 10, n. 1, p. 1, doi. 10.1371/journal.pcbi.1003452

By:

Nasir, Arshan;
Kim, Kyung Mo;
Caetano-Anollés, Gustavo

Publication type:

Article

Correlation between Oncogenic Mutations and Parameter Sensitivity of the Apoptosis Pathway Model.

Published in:

PLoS Computational Biology, 2014, v. 10, n. 1, p. 1, doi. 10.1371/journal.pcbi.1003451

By:

Chen, Jia;
Yue, Haicen;
Ouyang, Qi

Publication type:

Article

Automated Discovery of Tissue-Targeting Enhancers and Transcription Factors from Binding Motif and Gene Function Data.

Published in:

PLoS Computational Biology, 2014, v. 10, n. 1, p. 1, doi. 10.1371/journal.pcbi.1003449

By:

Tuteja, Geetu;
Moreira, Karen Betancourt;
Chung, Tisha;
Chen, Jenny;
Wenger, Aaron M.;
Bejerano, Gill

Publication type:

Article

A Division in PIN-Mediated Auxin Patterning during Organ Initiation in Grasses.

Published in:

PLoS Computational Biology, 2014, v. 10, n. 1, p. 1, doi. 10.1371/journal.pcbi.1003447

By:

O'Connor, Devin L.;
Runions, Adam;
Sluis, Aaron;
Bragg, Jennifer;
Vogel, John P.;
Prusinkiewicz, Przemyslaw;
Hake, Sarah

Publication type:

Article

Leadership and Path Characteristics during Walks Are Linked to Dominance Order and Individual Traits in Dogs.

Published in:

PLoS Computational Biology, 2014, v. 10, n. 1, p. 1, doi. 10.1371/journal.pcbi.1003446

By:

Ákos, Zsuzsa;
Beck, Róbert;
Nagy, Máté;
Vicsek, Tamás;
Kubinyi, Enikő

Publication type:

Article

Segregation and Crosstalk of D1 Receptor-Mediated Activation of ERK in Striatal Medium Spiny Neurons upon Acute Administration of Psychostimulants.

Published in:

PLoS Computational Biology, 2014, v. 10, n. 1, p. 1, doi. 10.1371/journal.pcbi.1003445

By:

Gutierrez-Arenas, Omar;
Eriksson, Olivia;
Hellgren Kotaleski, Jeanette

Publication type:

Article

An Allosteric Signaling Pathway of Human 3-Phosphoglycerate Kinase from Force Distribution Analysis.

Published in:

PLoS Computational Biology, 2014, v. 10, n. 1, p. 1, doi. 10.1371/journal.pcbi.1003444

By:

Palmai, Zoltan;
Seifert, Christian;
Gräter, Frauke;
Balog, Erika

Publication type:

Article

De Novo Prediction of PTBP1 Binding and Splicing Targets Reveals Unexpected Features of Its RNA Recognition and Function.

Published in:

PLoS Computational Biology, 2014, v. 10, n. 1, p. 1, doi. 10.1371/journal.pcbi.1003442

By:

Han, Areum;
Stoilov, Peter;
Linares, Anthony J.;
Zhou, Yu;
Fu, Xiang-Dong;
Black, Douglas L.

Publication type:

Article

VBA: A Probabilistic Treatment of Nonlinear Models for Neurobiological and Behavioural Data.

Published in:

PLoS Computational Biology, 2014, v. 10, n. 1, p. 1, doi. 10.1371/journal.pcbi.1003441

By:

Daunizeau, Jean;
Adam, Vincent;
Rigoux, Lionel

Publication type:

Article

Coarse-Grained Molecular Simulation of Epidermal Growth Factor Receptor Protein Tyrosine Kinase Multi-Site Self-Phosphorylation.

Published in:

PLoS Computational Biology, 2014, v. 10, n. 1, p. 1, doi. 10.1371/journal.pcbi.1003435

By:

Koland, John G.

Publication type:

Article

Consequences of Converting Graded to Action Potentials upon Neural Information Coding and Energy Efficiency.

Published in:

PLoS Computational Biology, 2014, v. 10, n. 1, p. 1, doi. 10.1371/journal.pcbi.1003439

By:

Sengupta, Biswa;
Laughlin, Simon Barry;
Niven, Jeremy Edward

Publication type:

Article

Integrated Text Mining and Chemoinformatics Analysis Associates Diet to Health Benefit at Molecular Level.

Published in:

PLoS Computational Biology, 2014, v. 10, n. 1, p. 1, doi. 10.1371/journal.pcbi.1003432

By:

Jensen, Kasper;
Panagiotou, Gianni;
Kouskoumvekaki, Irene

Publication type:

Article

Robustness of DNA Repair through Collective Rate Control.

Published in:

PLoS Computational Biology, 2014, v. 10, n. 1, p. 1, doi. 10.1371/journal.pcbi.1003438

By:

Verbruggen, Paul;
Heinemann, Tim;
Manders, Erik;
von Bornstaedt, Gesa;
van Driel, Roel;
Höfer, Thomas

Publication type:

Article

The Making of the Women in Biology Forum (WiB) at Bioclues.

Published in:

PLoS Computational Biology, 2014, v. 10, n. 1, p. 1, doi. 10.1371/journal.pcbi.1003436

By:

Singhania, Reeta Rani;
Madduru, Dhatri;
Pappu, Pranathi;
Panchangam, Sameera;
Suravajhala, Renuka;
Chandrasekharan, Mohanalatha

Publication type:

Article

PredictSNP: Robust and Accurate Consensus Classifier for Prediction of Disease-Related Mutations.

Published in:

PLoS Computational Biology, 2014, v. 10, n. 1, p. 1, doi. 10.1371/journal.pcbi.1003440

By:

Bendl, Jaroslav;
Stourac, Jan;
Salanda, Ondrej;
Pavelka, Antonin;
Wieben, Eric D.;
Zendulka, Jaroslav;
Brezovsky, Jan;
Damborsky, Jiri

Publication type:

Article

Modeling Within-Host Effects of Drugs on Plasmodium falciparum Transmission and Prospects for Malaria Elimination.

Published in:

PLoS Computational Biology, 2014, v. 10, n. 1, p. 1, doi. 10.1371/journal.pcbi.1003434

By:

Johnston, Geoffrey L.;
Gething, Peter W.;
Hay, Simon I.;
Smith, David L.;
Fidock, David A.

Publication type:

Article

The Correlation Structure of Local Neuronal Networks Intrinsically Results from Recurrent Dynamics.

Published in:

PLoS Computational Biology, 2014, v. 10, n. 1, p. 1, doi. 10.1371/journal.pcbi.1003428

By:

Helias, Moritz;
Tetzlaff, Tom;
Diesmann, Markus

Publication type:

Article

Timing over Tuning: Overcoming the Shortcomings of a Line Attractor during a Working Memory Task.

Published in:

PLoS Computational Biology, 2014, v. 10, n. 1, p. 1, doi. 10.1371/journal.pcbi.1003437

By:

Drover, Jonathan D.

Publication type:

Article

Estimating the Probability of Polyreactive Antibodies 4E10 and 2F5 Disabling a gp41 Trimer after T Cell-HIV Adhesion.

Published in:

PLoS Computational Biology, 2014, v. 10, n. 1, p. 1, doi. 10.1371/journal.pcbi.1003431

By:

Hu, Bin;
Liao, Hua-Xin;
Alam, S. Munir;
Goldstein, Byron

Publication type:

Article

Linkage of Viral Sequences among HIV-Infected Village Residents in Botswana: Estimation of Linkage Rates in the Presence of Missing Data.

Published in:

PLoS Computational Biology, 2014, v. 10, n. 1, p. 1, doi. 10.1371/journal.pcbi.1003430

By:

Carnegie, Nicole Bohme;
Wang, Rui;
Novitsky, Vladimir;
De Gruttola, Victor

Publication type:

Article

Phylogenetic Gaussian Process Model for the Inference of Functionally Important Regions in Protein Tertiary Structures.

Published in:

PLoS Computational Biology, 2014, v. 10, n. 1, p. 1, doi. 10.1371/journal.pcbi.1003429

By:

Huang, Yi-Fei;
Golding, G. Brian

Publication type:

Article

Microenvironmental Variables Must Influence Intrinsic Phenotypic Parameters of Cancer Stem Cells to Affect Tumourigenicity.

Published in:

PLoS Computational Biology, 2014, v. 10, n. 1, p. 1, doi. 10.1371/journal.pcbi.1003433

By:

Scott, Jacob G.;
Hjelmeland, Anita B.;
Chinnaiyan, Prakash;
Anderson, Alexander R. A.;
Basanta, David

Publication type:

Article

Communication Efficiency and Congestion of Signal Traffic in Large-Scale Brain Networks.

Published in:

PLoS Computational Biology, 2014, v. 10, n. 1, p. 1, doi. 10.1371/journal.pcbi.1003427

By:

Mišić, Bratislav;
Sporns, Olaf;
McIntosh, Anthony R.

Publication type:

Article

PEX5 and Ubiquitin Dynamics on Mammalian Peroxisome Membranes.

Published in:

PLoS Computational Biology, 2014, v. 10, n. 1, p. 1, doi. 10.1371/journal.pcbi.1003426

By:

Brown, Aidan I.;
Kim, Peter K.;
Rutenberg, Andrew D.

Publication type:

Article

Task-Specific Response Strategy Selection on the Basis of Recent Training Experience.

Published in:

PLoS Computational Biology, 2014, v. 10, n. 1, p. 1, doi. 10.1371/journal.pcbi.1003425

By:

Fulvio, Jacqueline M.;
Green, C. Shawn;
Schrater, Paul R.

Publication type:

Article

Fast Reconstruction of Compact Context-Specific Metabolic Network Models.

Published in:

PLoS Computational Biology, 2014, v. 10, n. 1, p. 1, doi. 10.1371/journal.pcbi.1003424

By:

Vlassis, Nikos;
Pacheco, Maria Pires;
Sauter, Thomas

Publication type:

Article

The Significance of the 2013 Nobel Prize in Chemistry and the Challenges Ahead.

Published in:

2014

By:

Nussinov, Ruth

Publication type:

Editorial

The Brain Ages Optimally to Model Its Environment: Evidence from Sensory Learning over the Adult Lifespan.

Published in:

PLoS Computational Biology, 2014, v. 10, n. 1, p. 1, doi. 10.1371/journal.pcbi.1003422

By:

Moran, Rosalyn J.;
Symmonds, Mkael;
Dolan, Raymond J.;
Friston, Karl J.

Publication type:

Article

A Multi-Scale Model of Hepcidin Promoter Regulation Reveals Factors Controlling Systemic Iron Homeostasis.

Published in:

PLoS Computational Biology, 2014, v. 10, n. 1, p. 1, doi. 10.1371/journal.pcbi.1003421

By:

Casanovas, Guillem;
Banerji, Anashua;
d'Alessio, Flavia;
Muckenthaler, Martina U.;
Legewie, Stefan

Publication type:

Article

Combinatorial Modeling of Chromatin Features Quantitatively Predicts DNA Replication Timing in Drosophila.

Published in:

PLoS Computational Biology, 2014, v. 10, n. 1, p. 1, doi. 10.1371/journal.pcbi.1003419

By:

Comoglio, Federico;
Paro, Renato

Publication type:

Article

Bioinformatics Projects Supporting Life-Sciences Learning in High Schools.

Published in:

PLoS Computational Biology, 2014, v. 10, n. 1, p. 1, doi. 10.1371/journal.pcbi.1003404

By:

Marques, Isabel;
Almeida, Paulo;
Alves, Renato;
Dias, Maria João;
Godinho, Ana;
Pereira-Leal, José B.

Publication type:

Article

The Role of Thalamic Population Synchrony in the Emergence of Cortical Feature Selectivity.

Published in:

PLoS Computational Biology, 2014, v. 10, n. 1, p. 1, doi. 10.1371/journal.pcbi.1003418

By:

Kelly, Sean T.;
Kremkow, Jens;
Jin, Jianzhong;
Wang, Yushi;
Wang, Qi;
Alonso, Jose-Manuel;
Stanley, Garrett B.

Publication type:

Article

The Free Energy Landscape of Dimerization of a Membrane Protein, NanC.

Published in:

PLoS Computational Biology, 2014, v. 10, n. 1, p. 1, doi. 10.1371/journal.pcbi.1003417

By:

Dunton, Thomas A.;
Goose, Joseph E.;
Gavaghan, David J.;
Sansom, Mark S. P.;
Osborne, James M.

Publication type:

Article

Population Decoding in Rat Barrel Cortex: Optimizing the Linear Readout of Correlated Population Responses.

Published in:

PLoS Computational Biology, 2014, v. 10, n. 1, p. 1, doi. 10.1371/journal.pcbi.1003415

By:

Adibi, Mehdi;
McDonald, James S.;
Clifford, Colin W. G.;
Arabzadeh, Ehsan

Publication type:

Article

Competition for Antigen between Th1 and Th2 Responses Determines the Timing of the Immune Response Switch during Mycobaterium avium Subspecies paratuberulosis Infection in Ruminants.

Published in:

PLoS Computational Biology, 2014, v. 10, n. 1, p. 1, doi. 10.1371/journal.pcbi.1003414

By:

Magombedze, Gesham;
Eda, Shigetoshi;
Ganusov, Vitaly V.

Publication type:

Article

Machine Learning Estimates of Natural Product Conformational Energies.

Published in:

PLoS Computational Biology, 2014, v. 10, n. 1, p. 1, doi. 10.1371/journal.pcbi.1003400

By:

Rupp, Matthias;
Bauer, Matthias R.;
Wilcken, Rainer;
Lange, Andreas;
Reutlinger, Michael;
Boeckler, Frank M.;
Schneider, Gisbert

Publication type:

Article

Environmental Influence on the Evolution of Morphological Complexity in Machines.

Published in:

PLoS Computational Biology, 2014, v. 10, n. 1, p. 1, doi. 10.1371/journal.pcbi.1003399

By:

Auerbach, Joshua E.;
Bongard, Josh C.

Publication type:

Article

Immune-Mediated Competition in Rodent Malaria Is Most Likely Caused by Induced Changes in Innate Immune Clearance of Merozoites.

Published in:

PLoS Computational Biology, 2014, v. 10, n. 1, p. 1, doi. 10.1371/journal.pcbi.1003416

By:

Santhanam, Jayanthi;
Råberg, Lars;
Read, Andrew F.;
Savill, Nicholas Jon

Publication type:

Article

Encoding of Natural Sounds at Multiple Spectral and Temporal Resolutions in the Human Auditory Cortex.

Published in:

PLoS Computational Biology, 2014, v. 10, n. 1, p. 1, doi. 10.1371/journal.pcbi.1003412

By:

Santoro, Roberta;
Moerel, Michelle;
De Martino, Federico;
Goebel, Rainer;
Ugurbil, Kamil;
Yacoub, Essa;
Formisano, Elia

Publication type:

Article

Searching for Collective Behavior in a Large Network of Sensory Neurons.

Published in:

PLoS Computational Biology, 2014, v. 10, n. 1, p. 1, doi. 10.1371/journal.pcbi.1003408

By:

Tkačik, Gašper;
Marre, Olivier;
Amodei, Dario;
Schneidman, Elad;
Bialek, William;
Berry II, Michael J.

Publication type:

Article

Optimal Screening Strategies for Healthcare Associated Infections in a Multi-Institutional Setting.

Published in:

PLoS Computational Biology, 2014, v. 10, n. 1, p. 1, doi. 10.1371/journal.pcbi.1003407

By:

Miller, Aaron C.;
Polgreen, Linnea A.;
Polgreen, Philip M.

Publication type:

Article

Intrinsic Noise Induces Critical Behavior in Leaky Markovian Networks Leading to Avalanching.

Published in:

PLoS Computational Biology, 2014, v. 10, n. 1, p. 1, doi. 10.1371/journal.pcbi.1003411

By:

Jenkinson, Garrett;
Goutsias, John

Publication type:

Article

Stress and Strain Provide Positional and Directional Cues in Development.

Published in:

PLoS Computational Biology, 2014, v. 10, n. 1, p. 1, doi. 10.1371/journal.pcbi.1003410

By:

Bozorg, Behruz;
Krupinski, Pawel;
Jönsson, Henrik

Publication type:

Article

Induction of Wnt-Inducible Signaling Protein-1 Correlates with Invasive Breast Cancer Oncogenesis and Reduced Type 1 Cell-Mediated Cytotoxic Immunity: A Retrospective Study.

Published in:

PLoS Computational Biology, 2014, v. 10, n. 1, p. 1, doi. 10.1371/journal.pcbi.1003409

By:

Klinke II, David J.

Publication type:

Article

Mathematical Modeling of Heterogeneous Electrophysiological Responses in Human β-Cells.

Published in:

PLoS Computational Biology, 2014, v. 10, n. 1, p. 1, doi. 10.1371/journal.pcbi.1003389

By:

Riz, Michela;
Braun, Matthias;
Pedersen, Morten Gram

Publication type:

Article

Enumeration of Smallest Intervention Strategies in Genome-Scale Metabolic Networks.

Published in:

PLoS Computational Biology, 2014, v. 10, n. 1, p. 1, doi. 10.1371/journal.pcbi.1003378

By:

von Kamp, Axel;
Klamt, Steffen

Publication type:

Article