Works matching IS 1553734X AND DT 2013 AND VI 9 AND IP 12

Results: 43

The Spirit of Competition: To Win or Not To Win.

Published in:

PLoS Computational Biology, 2013, v. 9, n. 12, p. 1, doi. 10.1371/journal.pcbi.1003413

By:

Szczepinska, Teresa;
Iwasaki, Wataru;
Abeel, Thomas

Publication type:

Article

Phenome-Wide Association Studies on a Quantitative Trait: Application to TPMT Enzyme Activity and Thiopurine Therapy in Pharmacogenomics.

Published in:

PLoS Computational Biology, 2013, v. 9, n. 12, p. 1, doi. 10.1371/journal.pcbi.1003405

By:

Neuraz, Antoine;
Chouchana, Laurent;
Malamut, Georgia;
Le Beller, Christine;
Roche, Denis;
Beaune, Philippe;
Degoulet, Patrice;
Burgun, Anita;
Loriot, Marie-Anne;
Avillach, Paul

Publication type:

Article

A Disorder-Induced Domino-Like Destabilization Mechanism Governs the Folding and Functional Dynamics of the Repeat Protein IκBα.

Published in:

PLoS Computational Biology, 2013, v. 9, n. 12, p. 1, doi. 10.1371/journal.pcbi.1003403

By:

Sivanandan, Srinivasan;
Naganathan, Athi N.

Publication type:

Article

Electrodiffusive Model for Astrocytic and Neuronal Ion Concentration Dynamics.

Published in:

PLoS Computational Biology, 2013, v. 9, n. 12, p. 1, doi. 10.1371/journal.pcbi.1003386

By:

Halnes, Geir;
Østby, Ivar;
Pettersen, Klas H.;
Omholt, Stig W.;
Einevoll, Gaute T.

Publication type:

Article

A Latent Markov Modelling Approach to the Evaluation of Circulating Cathodic Antigen Strips for Schistosomiasis Diagnosis Pre- and Post-Praziquantel Treatment in Uganda.

Published in:

PLoS Computational Biology, 2013, v. 9, n. 12, p. 1, doi. 10.1371/journal.pcbi.1003402

By:

Koukounari, Artemis;
Donnelly, Christl A.;
Moustaki, Irini;
Tukahebwa, Edridah M.;
Kabatereine, Narcis B.;
Wilson, Shona;
Webster, Joanne P.;
Deelder, André M.;
Vennervald, Birgitte J.;
van Dam, Govert J.

Publication type:

Article

Metabolic and Demographic Feedbacks Shape the Emergent Spatial Structure and Function of Microbial Communities.

Published in:

PLoS Computational Biology, 2013, v. 9, n. 12, p. 1, doi. 10.1371/journal.pcbi.1003398

By:

Estrela, Sylvie;
Brown, Sam P.

Publication type:

Article

Cortical and Hippocampal Correlates of Deliberation during Model-Based Decisions for Rewards in Humans.

Published in:

PLoS Computational Biology, 2013, v. 9, n. 12, p. 1, doi. 10.1371/journal.pcbi.1003387

By:

Bornstein, Aaron M.;
Daw, Nathaniel D.

Publication type:

Article

Ecological Modeling from Time-Series Inference: Insight into Dynamics and Stability of Intestinal Microbiota.

Published in:

PLoS Computational Biology, 2013, v. 9, n. 12, p. 1, doi. 10.1371/journal.pcbi.1003388

By:

Stein, Richard R.;
Bucci, Vanni;
Toussaint, Nora C.;
Buffie, Charlie G.;
Rätsch, Gunnar;
Pamer, Eric G.;
Sander, Chris;
Xavier, João B.

Publication type:

Article

Moving Education Forward, Again!

Published in:

PLoS Computational Biology, 2013, v. 9, n. 12, p. 1, doi. 10.1371/journal.pcbi.1003390

By:

Lewitter, Fran

Publication type:

Article

Cortically-Controlled Population Stochastic Facilitation as a Plausible Substrate for Guiding Sensory Transfer across the Thalamic Gateway.

Published in:

PLoS Computational Biology, 2013, v. 9, n. 12, p. 1, doi. 10.1371/journal.pcbi.1003401

By:

Béhuret, Sébastien;
Deleuze, Charlotte;
Gomez, Leonel;
Frégnac, Yves;
Bal, Thierry

Publication type:

Article

Inferring the Source of Transmission with Phylogenetic Data.

Published in:

PLoS Computational Biology, 2013, v. 9, n. 12, p. 1, doi. 10.1371/journal.pcbi.1003397

By:

Volz, Erik M.;
Frost, Simon D. W.

Publication type:

Article

Education in Computational Biology Today and Tomorrow.

Published in:

PLoS Computational Biology, 2013, v. 9, n. 12, p. 1, doi. 10.1371/journal.pcbi.1003391

By:

Fox, Joanne A.;
Ouellette, B. F. Francis

Publication type:

Article

GDI-Mediated Cell Polarization in Yeast Provides Precise Spatial and Temporal Control of Cdc42 Signaling.

Published in:

PLoS Computational Biology, 2013, v. 9, n. 12, p. 1, doi. 10.1371/journal.pcbi.1003396

By:

Klünder, Ben;
Freisinger, Tina;
Wedlich-Söldner, Roland;
Frey, Erwin

Publication type:

Article

Utilizing a Dynamical Description of IspH to Aid in the Development of Novel Antimicrobial Drugs.

Published in:

PLoS Computational Biology, 2013, v. 9, n. 12, p. 1, doi. 10.1371/journal.pcbi.1003395

By:

Blachly, Patrick G.;
de Oliveira, César A. F.;
Williams, Sarah L.;
McCammon, J. Andrew

Publication type:

Article

Exploring Early Stages of the Chemical Unfolding of Proteins at the Proteome Scale.

Published in:

PLoS Computational Biology, 2013, v. 9, n. 12, p. 1, doi. 10.1371/journal.pcbi.1003393

By:

Candotti, Michela;
Pérez, Alberto;
Ferrer-Costa, Carles;
Rueda, Manuel;
Meyer, Tim;
Gelpí, Josep Lluís;
Orozco, Modesto

Publication type:

Article

Inferring Developmental Stage Composition from Gene Expression in Human Malaria.

Published in:

PLoS Computational Biology, 2013, v. 9, n. 12, p. 1, doi. 10.1371/journal.pcbi.1003392

By:

Joice, Regina;
Narasimhan, Vagheesh;
Montgomery, Jacqui;
Sidhu, Amar Bir;
Oh, Keunyoung;
Meyer, Evan;
Pierre-Louis, Willythssa;
Seydel, Karl;
Milner, Danny;
Williamson, Kim;
Wiegand, Roger;
Ndiaye, Daouda;
Daily, Johanna;
Wirth, Dyann;
Taylor, Terrie;
Huttenhower, Curtis;
Marti, Matthias

Publication type:

Article

Handling Uncertainty in Dynamic Models: The Pentose Phosphate Pathway in Trypanosoma brucei.

Published in:

PLoS Computational Biology, 2013, v. 9, n. 12, p. 1, doi. 10.1371/journal.pcbi.1003371

By:

Kerkhoven, Eduard J.;
Achcar, Fiona;
Alibu, Vincent P.;
Burchmore, Richard J.;
Gilbert, Ian H.;
Trybiło, Maciej;
Driessen, Nicole N.;
Gilbert, David;
Breitling, Rainer;
Bakker, Barbara M.;
Barrett, Michael P.

Publication type:

Article

Protein-Protein Interactions in a Crowded Environment: An Analysis via Cross-Docking Simulations and Evolutionary Information.

Published in:

PLoS Computational Biology, 2013, v. 9, n. 12, p. 1, doi. 10.1371/journal.pcbi.1003369

By:

Lopes, Anne;
Sacquin-Mora, Sophie;
Dimitrova, Viktoriya;
Laine, Elodie;
Ponty, Yann;
Carbone, Alessandra

Publication type:

Article

Metabolic Constraint-Based Refinement of Transcriptional Regulatory Networks.

Published in:

PLoS Computational Biology, 2013, v. 9, n. 12, p. 1, doi. 10.1371/journal.pcbi.1003370

By:

Chandrasekaran, Sriram;
Price, Nathan D.

Publication type:

Article

Systems Modeling of Anti-apoptotic Pathways in Prostate Cancer: Psychological Stress Triggers a Synergism Pattern Switch in Drug Combination Therapy.

Published in:

PLoS Computational Biology, 2013, v. 9, n. 12, p. 1, doi. 10.1371/journal.pcbi.1003358

By:

Sun, Xiaoqiang;
Bao, Jiguang;
Nelson, Kyle C.;
Li, King Chuen;
Kulik, George;
Zhou, Xiaobo

Publication type:

Article

Forward and Backward Inference in Spatial Cognition.

Published in:

PLoS Computational Biology, 2013, v. 9, n. 12, p. 1, doi. 10.1371/journal.pcbi.1003383

By:

Penny, Will D.;
Zeidman, Peter;
Burgess, Neil

Publication type:

Article

Modeling the Afferent Dynamics of the Baroreflex Control System.

Published in:

PLoS Computational Biology, 2013, v. 9, n. 12, p. 1, doi. 10.1371/journal.pcbi.1003384

By:

Mahdi, Adam;
Sturdy, Jacob;
Ottesen, Johnny T.;
Olufsen, Mette S.

Publication type:

Article

Amino Acid Changes in Disease-Associated Variants Differ Radically from Variants Observed in the 1000 Genomes Project Dataset.

Published in:

PLoS Computational Biology, 2013, v. 9, n. 12, p. 1, doi. 10.1371/journal.pcbi.1003382

By:

de Beer, Tjaart A. P.;
Laskowski, Roman A.;
Parks, Sarah L.;
Sipos, Botond;
Goldman, Nick;
Thornton, Janet M.

Publication type:

Article

Time Scales in Epigenetic Dynamics and Phenotypic Heterogeneity of Embryonic Stem Cells.

Published in:

PLoS Computational Biology, 2013, v. 9, n. 12, p. 1, doi. 10.1371/journal.pcbi.1003380

By:

Sasai, Masaki;
Kawabata, Yudai;
Makishi, Koh;
Itoh, Kazuhito;
Terada, Tomoki P.

Publication type:

Article

Extrapolating Weak Selection in Evolutionary Games.

Published in:

PLoS Computational Biology, 2013, v. 9, n. 12, p. 1, doi. 10.1371/journal.pcbi.1003381

By:

Wu, Bin;
García, Julián;
Hauert, Christoph;
Traulsen, Arne

Publication type:

Article

Decipher the Mechanisms of Protein Conformational Changes Induced by Nucleotide Binding through Free-Energy Landscape Analysis: ATP Binding to Hsp70.

Published in:

PLoS Computational Biology, 2013, v. 9, n. 12, p. 1, doi. 10.1371/journal.pcbi.1003379

By:

Nicolaï, Adrien;
Delarue, Patrice;
Senet, Patrick

Publication type:

Article

Detecting Genetic Association of Common Human Facial Morphological Variation Using High Density 3D Image Registration.

Published in:

PLoS Computational Biology, 2013, v. 9, n. 12, p. 1, doi. 10.1371/journal.pcbi.1003375

By:

Peng, Shouneng;
Tan, Jingze;
Hu, Sile;
Zhou, Hang;
Guo, Jing;
Jin, Li;
Tang, Kun

Publication type:

Article

A Network Inference Method for Large-Scale Unsupervised Identification of Novel Drug-Drug Interactions.

Published in:

PLoS Computational Biology, 2013, v. 9, n. 12, p. 1, doi. 10.1371/journal.pcbi.1003374

By:

Guimerà, Roger;
Sales-Pardo, Marta

Publication type:

Article

Structural Control of Metabolic Flux.

Published in:

PLoS Computational Biology, 2013, v. 9, n. 12, p. 1, doi. 10.1371/journal.pcbi.1003368

By:

Sajitz-Hermstein, Max;
Nikoloski, Zoran

Publication type:

Article

Understanding Variation in Transcription Factor Binding by Modeling Transcription Factor Genome-Epigenome Interactions.

Published in:

PLoS Computational Biology, 2013, v. 9, n. 12, p. 1, doi. 10.1371/journal.pcbi.1003367

By:

Chen, Chieh-Chun;
Xiao, Shu;
Xie, Dan;
Cao, Xiaoyi;
Song, Chun-Xiao;
Wang, Ting;
He, Chuan;
Zhong, Sheng

Publication type:

Article

Flow Cytometry Bioinformatics.

Published in:

PLoS Computational Biology, 2013, v. 9, n. 12, p. 1, doi. 10.1371/journal.pcbi.1003365

By:

O'Neill, Kieran;
Aghaeepour, Nima;
Špidlen, Josef;
Brinkman, Ryan

Publication type:

Article

Designing Molecular Dynamics Simulations to Shift Populations of the Conformational States of Calmodulin.

Published in:

PLoS Computational Biology, 2013, v. 9, n. 12, p. 1, doi. 10.1371/journal.pcbi.1003366

By:

Aykut, Ayse Ozlem;
Atilgan, Ali Rana;
Atilgan, Canan

Publication type:

Article

A Sequential Vesicle Pool Model with a Single Release Sensor and a Ca2+-Dependent Priming Catalyst Effectively Explains Ca2+-Dependent Properties of Neurosecretion.

Published in:

PLoS Computational Biology, 2013, v. 9, n. 12, p. 1, doi. 10.1371/journal.pcbi.1003362

By:

Walter, Alexander M.;
Pinheiro, Paulo S.;
Verhage, Matthijs;
Sørensen, Jakob B.

Publication type:

Article

Transformation of Stimulus Correlations by the Retina.

Published in:

PLoS Computational Biology, 2013, v. 9, n. 12, p. 1, doi. 10.1371/journal.pcbi.1003344

By:

Simmons, Kristina D.;
Prentice, Jason S.;
Tkačik, Gašper;
Homann, Jan;
Yee, Heather K.;
Palmer, Stephanie E.;
Nelson, Philip C.;
Balasubramanian, Vijay

Publication type:

Article

Actions, Action Sequences and Habits: Evidence That Goal-Directed and Habitual Action Control Are Hierarchically Organized.

Published in:

PLoS Computational Biology, 2013, v. 9, n. 12, p. 1, doi. 10.1371/journal.pcbi.1003364

By:

Dezfouli, Amir;
Balleine, Bernard W.

Publication type:

Article

Dimensionality of Carbon Nanomaterials Determines the Binding and Dynamics of Amyloidogenic Peptides: Multiscale Theoretical Simulations.

Published in:

PLoS Computational Biology, 2013, v. 9, n. 12, p. 1, doi. 10.1371/journal.pcbi.1003360

By:

Todorova, Nevena;
Makarucha, Adam J.;
Hine, Nicholas D. M.;
Mostofi, Arash A.;
Yarovsky, Irene

Publication type:

Article

Determinants of Cell-to-Cell Variability in Protein Kinase Signaling.

Published in:

PLoS Computational Biology, 2013, v. 9, n. 12, p. 1, doi. 10.1371/journal.pcbi.1003357

By:

Jeschke, Matthias;
Baumgärtner, Stephan;
Legewie, Stefan

Publication type:

Article

Epidemic Spread on Weighted Networks.

Published in:

PLoS Computational Biology, 2013, v. 9, n. 12, p. 1, doi. 10.1371/journal.pcbi.1003352

By:

Kamp, Christel;
Moslonka-Lefebvre, Mathieu;
Alizon, Samuel

Publication type:

Article

Membrane Binding of MinE Allows for a Comprehensive Description of Min-Protein Pattern Formation.

Published in:

PLoS Computational Biology, 2013, v. 9, n. 12, p. 1, doi. 10.1371/journal.pcbi.1003347

By:

Bonny, Mike;
Fischer-Friedrich, Elisabeth;
Loose, Martin;
Schwille, Petra;
Kruse, Karsten

Publication type:

Article

Next-Generation Sequence Assembly: Four Stages of Data Processing and Computational Challenges.

Published in:

PLoS Computational Biology, 2013, v. 9, n. 12, p. 1, doi. 10.1371/journal.pcbi.1003345

By:

El-Metwally, Sara;
Hamza, Taher;
Zakaria, Magdi;
Helmy, Mohamed

Publication type:

Article

Sharpness of Spike Initiation in Neurons Explained by Compartmentalization.

Published in:

PLoS Computational Biology, 2013, v. 9, n. 12, p. 1, doi. 10.1371/journal.pcbi.1003338

By:

Brette, Romain

Publication type:

Article

Heterogeneity, Mixing, and the Spatial Scales of Mosquito-Borne Pathogen Transmission.

Published in:

PLoS Computational Biology, 2013, v. 9, n. 12, p. 1, doi. 10.1371/journal.pcbi.1003327

By:

Perkins, T. Alex;
Scott, Thomas W.;
Le Menach, Arnaud;
Smith, David L.

Publication type:

Article

Perturbation Biology: Inferring Signaling Networks in Cellular Systems.

Published in:

PLoS Computational Biology, 2013, v. 9, n. 12, p. 1, doi. 10.1371/journal.pcbi.1003290

By:

Molinelli, Evan J.;
Korkut, Anil;
Wang, Weiqing;
Miller, Martin L.;
Gauthier, Nicholas P.;
Jing, Xiaohong;
Kaushik, Poorvi;
He, Qin;
Mills, Gordon;
Solit, David B.;
Pratilas, Christine A.;
Weigt, Martin;
Braunstein, Alfredo;
Pagnani, Andrea;
Zecchina, Riccardo;
Sander, Chris

Publication type:

Article