Works matching IS 1553734X AND DT 2012 AND VI 8 AND IP 9

Results: 39

The Mechanistic Basis of Myxococcus xanthus Rippling Behavior and Its Physiological Role during Predation.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 9, p. 1, doi. 10.1371/journal.pcbi.1002715

By:

Zhang, Haiyang;
Vaksman, Zalman;
Litwin, Douglas B.;
Shi, Peng;
Kaplan, Heidi B.;
Igoshin, Oleg A.

Publication type:

Article

Confidence-based Somatic Mutation Evaluation and Prioritization.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 9, p. 1, doi. 10.1371/journal.pcbi.1002714

By:

Löwer, Martin;
Renard, Bernhard Y.;
Graaf, Jos de;
Wagner, Meike;
Paret, Claudia;
Kneip, Christoph;
Türeci, Özlem;
Diken, Mustafa;
Britten, Cedrik;
Kreiter, Sebastian;
Koslowski, Michael;
Castle, John C.;
Sahin, Ugur

Publication type:

Article

Ten Simple Rules to Commercialize Scientific Research.

Published in:

2012

By:

Fletcher, Anthony C.;
Bourne, Philip E.

Publication type:

Editorial

Why Open Drug Discovery Needs Four Simple Rules for Licensing Data and Models.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 9, p. 1, doi. 10.1371/journal.pcbi.1002706

By:

Williams, Antony J.;
Wilbanks, John;
Ekins, Sean

Publication type:

Article

Coupling between Catalytic Loop Motions and Enzyme Global Dynamics.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 9, p. 1, doi. 10.1371/journal.pcbi.1002705

By:

Kurkcuoglu, Zeynep;
Bakan, Ahmet;
Kocaman, Duygu;
Bahar, Ivet;
Doruker, Pemra

Publication type:

Article

The p7 Protein of Hepatitis C Virus Forms Structurally Plastic, Minimalist Ion Channels.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 9, p. 1, doi. 10.1371/journal.pcbi.1002702

By:

Chandler, Danielle E.;
Penin, Francois;
Schulten, Klaus;
Chipot, Christophe

Publication type:

Article

Multistationary and Oscillatory Modes of Free Radicals Generation by the Mitochondrial Respiratory Chain Revealed by a Bifurcation Analysis.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 9, p. 1, doi. 10.1371/journal.pcbi.1002700

By:

Selivanov, Vitaly A.;
Cascante, Marta;
Friedman, Mark;
Schumaker, Mark F.;
Trucco, Massimo;
Votyakova, Tatyana V.

Publication type:

Article

Risk-Sensitivity in Bayesian Sensorimotor Integration.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 9, p. 1, doi. 10.1371/journal.pcbi.1002698

By:

Grau-Moya, Jordi;
Ortega, Pedro A.;
Braun, Daniel A.

Publication type:

Article

Modeling the Seasonal Adaptation of Circadian Clocks by Changes in the Network Structure of the Suprachiasmatic Nucleus.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 9, p. 1, doi. 10.1371/journal.pcbi.1002697

By:

Bodenstein, Christian;
Gosak, Marko;
Schuster, Stefan;
Marhl, Marko;
Perc, Matjaž

Publication type:

Article

Substrate-Specific Reorganization of the Conformational Ensemble of CSK Implicates Novel Modes of Kinase Function.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 9, p. 1, doi. 10.1371/journal.pcbi.1002695

By:

Jamros, Michael A.;
Oliveira, Leandro C.;
Whitford, Paul C.;
Onuchic, José N.;
Adams, Joseph A.;
Jennings, Patricia A.

Publication type:

Article

Tissue-Specific Functional Networks for Prioritizing Phenotype and Disease Genes.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 9, p. 1, doi. 10.1371/journal.pcbi.1002694

By:

Guan, Yuanfang;
Gorenshteyn, Dmitriy;
Burmeister, Margit;
Wong, Aaron K.;
Schimenti, John C.;
Handel, Mary Ann;
Bult, Carol J.;
Hibbs, Matthew A.;
Troyanskaya, Olga G.

Publication type:

Article

Convergent Transmission of RNAi Guide-Target Mismatch Information across Argonaute Internal Allosteric Network.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 9, p. 1, doi. 10.1371/journal.pcbi.1002693

By:

Joseph, Thomas T.;
Osman, Roman

Publication type:

Article

Spike-based Decision Learning of Nash Equilibria in Two- Player Games.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 9, p. 1, doi. 10.1371/journal.pcbi.1002691

By:

Friedrich, Johannes;
Senn, Walter

Publication type:

Article

Enhancing the Prioritization of Disease-Causing Genes through Tissue Specific Protein Interaction Networks.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 9, p. 1, doi. 10.1371/journal.pcbi.1002690

By:

Magger, Oded;
Waldman, Yedael Y.;
Ruppin, Eytan;
Sharan, Roded

Publication type:

Article

Spike-Timing Dependence of Structural Plasticity Explains Cooperative Synapse Formation in the Neocortex.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 9, p. 1, doi. 10.1371/journal.pcbi.1002689

By:

Deger, Moritz;
Helias, Moritz;
Rotter, Stefan;
Diesmann, Markus

Publication type:

Article

Modeling Phenotypic Metabolic Adaptations of Mycobacterium tuberculosis H37Rv under Hypoxia.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 9, p. 1, doi. 10.1371/journal.pcbi.1002688

By:

Fang, Xin;
Wallqvist, Anders;
Reifman, Jaques

Publication type:

Article

Inferring Correlation Networks from Genomic Survey Data.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 9, p. 1, doi. 10.1371/journal.pcbi.1002687

By:

Friedman, Jonathan;
Alm, Eric J.

Publication type:

Article

Determinants of Brain Cell Metabolic Phenotypes and Energy Substrate Utilization Unraveled with a Modeling Approach.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 9, p. 1, doi. 10.1371/journal.pcbi.1002686

By:

Neves, Aitana;
Costalat, Robert;
Pellerin, Luc

Publication type:

Article

Mechanism of Bacterial Signal Transduction Revealed by Molecular Dynamics of Tsr Dimers and Trimers of Dimers in Lipid Vesicles.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 9, p. 1, doi. 10.1371/journal.pcbi.1002685

By:

Hall, Benjamin A.;
Armitage, Judith P.;
Sansom, Mark S. P.

Publication type:

Article

Structural Investigation of MscL Gating Using Experimental Data and Coarse Grained MD Simulations.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 9, p. 1, doi. 10.1371/journal.pcbi.1002683

By:

Deplazes, Evelyne;
Louhivuori, Martti;
Jayatilaka, Dylan;
Marrink, Siewert J.;
Corry, Ben

Publication type:

Article

Binding of Two Intrinsically Disordered Peptides to a Multi-Specific Protein: A Combined Monte Carlo and Molecular Dynamics Study.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 9, p. 1, doi. 10.1371/journal.pcbi.1002682

By:

Staneva, Iskra;
Huang, Yongqi;
Liu, Zhirong;
Wallin, Stefan

Publication type:

Article

Stress-Induced Impairment of a Working Memory Task: Role of Spiking Rate and Spiking History Predicted Discharge.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 9, p. 1, doi. 10.1371/journal.pcbi.1002681

By:

Devilbiss, David M.;
Jenison, Rick L.;
Berridge, Craig W.

Publication type:

Article

Analysis of Surface Protein Expression Reveals the Growth Pattern of the Gram-Negative Outer Membrane.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 9, p. 1, doi. 10.1371/journal.pcbi.1002680

By:

Ursell, Tristan S.;
Trepagnier, Eliane H.;
Huang, Kerwyn Casey;
Theriot, Julie A.

Publication type:

Article

Deciphering Interactions in Moving Animal Groups.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 9, p. 1, doi. 10.1371/journal.pcbi.1002678

By:

Gautrais, Jacques;
Ginelli, Francesco;
Fournier, Richard;
Blanco, Ste'phane;
Soria, Marc;
Chaté, Hugues;
Theraulaz, Guy

Publication type:

Article

Speeded Reaching Movements around Invisible Obstacles.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 9, p. 1, doi. 10.1371/journal.pcbi.1002676

By:

Hudson, Todd E.;
Wolfe, Uta;
Maloney, Laurence T.

Publication type:

Article

Correlated Electrostatic Mutations Provide a Reservoir of Stability in HIV Protease.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 9, p. 1, doi. 10.1371/journal.pcbi.1002675

By:

Haq, Omar;
Andrec, Michael;
Morozov, Alexandre V.;
Levy, Ronald M.

Publication type:

Article

Inferring the Structure of Social Contacts from Demographic Data in the Analysis of Infectious Diseases Spread.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 9, p. 1, doi. 10.1371/journal.pcbi.1002673

By:

Fumanelli, Laura;
Ajelli, Marco;
Manfredi, Piero;
Vespignani, Alessandro;
Merler, Stefano

Publication type:

Article

Criticality Is an Emergent Property of Genetic Networks that Exhibit Evolvability.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 9, p. 1, doi. 10.1371/journal.pcbi.1002669

By:

Torres-Sosa, Christian;
Huang, Sui;
Aldana, Maximino

Publication type:

Article

A Novel Computational Method Identifies Intra- and Inter-Species Recombination Events in Staphylococcus aureus and Streptococcus pneumoniae.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 9, p. 1, doi. 10.1371/journal.pcbi.1002668

By:

Sanguinetti, Lisa;
Toti, Simona;
Reguzzi, Valerio;
Bagnoli, Fabio;
Donati, Claudio

Publication type:

Article

The Spatial Structure of Stimuli Shapes the Timescale of Correlations in Population Spiking Activity.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 9, p. 1, doi. 10.1371/journal.pcbi.1002667

By:

Litwin-Kumar, Ashok;
Chacron, Maurice J.;
Doiron, Brent

Publication type:

Article

Spontaneous Excitation Patterns Computed for Axons with Injury-like Impairments of Sodium Channels and Na/K Pumps.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 9, p. 1, doi. 10.1371/journal.pcbi.1002664

By:

Yu, Na;
Morris, Catherine E.;
Joós, Béla;
Longtin, André

Publication type:

Article

Dependencies among Editing Sites in Serotonin 2C Receptor mRNA.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 9, p. 1, doi. 10.1371/journal.pcbi.1002663

By:

Carmel, Liran;
Koonin, Eugene V.;
Dracheva, Stella

Publication type:

Article

Evolutionary Dynamics on Protein Bi-stability Landscapes Can Potentially Resolve Adaptive Conflicts.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 9, p. 1, doi. 10.1371/journal.pcbi.1002659

By:

Sikosek, Tobias;
Bornberg-Bauer, Erich;
Chan, Hue Sun

Publication type:

Article

High-throughput Computer Method for 3D Neuronal Structure Reconstruction from the Image Stack of the Drosophila Brain and Its Applications.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 9, p. 1, doi. 10.1371/journal.pcbi.1002658

By:

Lee, Ping-Chang;
Chuang, Chao-Chun;
Chiang, Ann-Shyn;
Ching, Yu-Tai

Publication type:

Article

Human Motor Cortical Activity Is Selectively Phase- Entrained on Underlying Rhythms.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 9, p. 1, doi. 10.1371/journal.pcbi.1002655

By:

Miller, Kai J.;
Hermes, Dora;
Honey, Christopher J.;
Hebb, Adam O.;
Ramsey, Nick F.;
Knight, Robert T.;
Ojemann, Jeffrey G.;
Fetz, Eberhard E.

Publication type:

Article

What Evidence Is There for the Homology of Protein- Protein Interactions?

Published in:

PLoS Computational Biology, 2012, v. 8, n. 9, p. 1, doi. 10.1371/journal.pcbi.1002645

By:

Lewis, Anna C. F.;
Jones, Nick S.;
Porter, Mason A.;
Deane, Charlotte M.

Publication type:

Article

An Online Bioinformatics Curriculum.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 9, p. 1, doi. 10.1371/journal.pcbi.1002632

By:

Searls, David B.

Publication type:

Article

Ten Simple Rules for Online Learning.

Published in:

2012

By:

Searls, David B.

Publication type:

Editorial

Predicting the Extension of Biomedical Ontologies.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 9, p. 1, doi. 10.1371/journal.pcbi.1002630

By:

Pesquita, Catia;
Couto, Francisco M.

Publication type:

Article