Works matching IS 1553734X AND DT 2012 AND VI 8 AND IP 2

Results: 34

Comparison of Insertional RNA Editing in Myxomycetes.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 2, p. 1, doi. 10.1371/journal.pcbi.1002400

By:

Cai Chen;
Frankhouser, David;
Bundschuh, Ralf

Publication type:

Article

The Role of Conserved Waters in Conformational Transitions of Q61H K-ras.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 2, p. 1, doi. 10.1371/journal.pcbi.1002394

By:

Prakash, Priyanka;
Sayyed-Ahmad, Abdallah;
Gorfe, Alemayehu A.

Publication type:

Article

Robust Detection of Hierarchical Communities from Escherichia coli Gene Expression Data.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 2, p. 1, doi. 10.1371/journal.pcbi.1002391

By:

Trevinñ III, Santiago;
Sun, Yudong;
Cooper, Tim F.;
Bassler, Kevin E.

Publication type:

Article

Effects of Electrical and Structural Remodeling on Atrial Fibrillation Maintenance: A Simulation Study.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 2, p. 1, doi. 10.1371/journal.pcbi.1002390

By:

Krogh-Madsen, Trine;
Abbott, Geoffrey W.;
Christini, David J.

Publication type:

Article

Noise and Robustness in Phyllotaxis.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 2, p. 1, doi. 10.1371/journal.pcbi.1002389

By:

Mirabet, Vincent;
Besnard, Fabrice;
Vernoux, Teva;
Boudaoud, Arezki

Publication type:

Article

Structural Consensus among Antibodies Defines the Antigen Binding Site.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 2, p. 1, doi. 10.1371/journal.pcbi.1002388

By:

Kunik, Vered;
Peters, Bjoern;
Ofran, Yanay

Publication type:

Article

On the Use of Gene Ontology Annotations to Assess Functional Similarity among Orthologs and Paralogs: A Short Report.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 2, p. 1, doi. 10.1371/journal.pcbi.1002386

By:

Thomas, Paul D.;
Wood, Valerie;
Mungall, Christopher J.;
Lewis, Suzanna E.;
Blake, Judith A.

Publication type:

Article

Subcellular Location of PKA Controls Striatal Plasticity: Stochastic Simulations in Spiny Dendrites.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 2, p. 1, doi. 10.1371/journal.pcbi.1002383

By:

Oliveira, Rodrigo F.;
MyungSook Kim;
Blackwell, Kim T.

Publication type:

Article

Paradoxical Evidence Integration in Rapid Decision Processes.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 2, p. 1, doi. 10.1371/journal.pcbi.1002382

By:

Rüter, Johannes;
Marcille, Nicolas;
Sprekeler, Henning;
Gerstner, Wulfram;
Herzog, Michael H.

Publication type:

Article

Positive Evolutionary Selection of an HD Motif on Alzheimer Precursor Protein Orthologues Suggests a Functional Role.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 2, p. 1, doi. 10.1371/journal.pcbi.1002356

By:

Miklós, István;
Zádori, Zoltán

Publication type:

Article

In silico Experimentation of Glioma Microenvironment Development and Anti-tumor Therapy.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 2, p. 1, doi. 10.1371/journal.pcbi.1002355

By:

Yu Wu;
Yao Lu;
Weiqiang Chen;
Jianping Fu;
Rong Fan

Publication type:

Article

Using Functional Signatures to Identify Repositioned Drugs for Breast, Myelogenous Leukemia and Prostate Cancer.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 2, p. 1, doi. 10.1371/journal.pcbi.1002347

By:

Shigemizu, Daichi;
Zhenjun Hu;
Jui-Hung Hung;
Chia-Ling Huang;
Yajie Wang;
DeLisi, Charles

Publication type:

Article

DOGS: Reaction-Driven de novo Design of Bioactive Compounds.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 2, p. 1, doi. 10.1371/journal.pcbi.1002380

By:

Hartenfeller, Markus;
Zettl, Heiko;
Walter, Miriam;
Rupp, Matthias;
Reisen, Felix;
Proschak, Ewgenij;
Weggen, Sascha;
Stark, Holger;
Schneider, Gisbert

Publication type:

Article

The Efficiency of the Human CD8+ T Cell Response: How Should We Quantify It, What Determines It, and Does It Matter?

Published in:

PLoS Computational Biology, 2012, v. 8, n. 2, p. 1, doi. 10.1371/journal.pcbi.1002381

By:

Elemans, Marjet;
Basatena, Nafisa-Katrin Seich al;
Asquith, Becca

Publication type:

Article

Modeling Cortisol Dynamics in the Neuro-endocrine Axis Distinguishes Normal, Depression, and Post-traumatic Stress Disorder (PTSD) in Humans.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 2, p. 1, doi. 10.1371/journal.pcbi.1002379

By:

Sriram, K.;
Rodriguez-Fernandez, Maria;
Doyle III, Francis J.

Publication type:

Article

A Cell-based Computational Modeling Approach for Developing Site-Directed Molecular Probes.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 2, p. 1, doi. 10.1371/journal.pcbi.1002378

By:

Jing-yu Yu;
Nan Zheng;
Mane, Gerta;
Kyoung Ah Min;
Hinestroza, Juan P.;
Zhu, Huaning;
Stringer, Kathleen A.;
Rosania, Gus R.

Publication type:

Article

Branch Mode Selection during Early Lung Development.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 2, p. 1, doi. 10.1371/journal.pcbi.1002377

By:

Menshykau, Denis;
Kraemer, Conradin;
Iber, Dagmar

Publication type:

Article

Integrating Flux Balance Analysis into Kinetic Models to Decipher the Dynamic Metabolism of Shewanella oneidensis MR-1.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 2, p. 1, doi. 10.1371/journal.pcbi.1002376

By:

Xueyang Feng;
You Xu;
Yixin Chen;
Tang, Yinjie J.

Publication type:

Article

Ten Years of Pathway Analysis: Current Approaches and Outstanding Challenges.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 2, p. 1, doi. 10.1371/journal.pcbi.1002375

By:

Khatri, Purvesh;
Sirota, Marina;
Butte, Atul J.

Publication type:

Article

Joint Analysis of Multiple Metagenomic Samples.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 2, p. 1, doi. 10.1371/journal.pcbi.1002373

By:

Baran, Yael;
Halperin, Eran

Publication type:

Article

Developmental Maturation of Dynamic Causal Control Signals in Higher-Order Cognition: A Neurocognitive Network Model.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 2, p. 1, doi. 10.1371/journal.pcbi.1002374

By:

Supekar, Kaustubh;
Menon, Vinod

Publication type:

Article

Multi-Scale Modeling of HIV Infection in vitro and APOBEC3G-Based Anti-Retroviral Therapy.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 2, p. 1, doi. 10.1371/journal.pcbi.1002371

By:

Hosseini, Iraj;
Gabhann, Feilim Mac

Publication type:

Article

A Race between Tumor Immunoescape and Genome Maintenance Selects for Optimum Levels of (epi)genetic Instability.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 2, p. 1, doi. 10.1371/journal.pcbi.1002370

By:

Iwami, Shingo;
Haeno, Hiroshi;
Michor, Franziska

Publication type:

Article

Control of Whole Heart Geometry by Intramyocardial Mechano-Feedback: A Model Study.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 2, p. 1, doi. 10.1371/journal.pcbi.1002369

By:

Arts, Theo;
Lumens, Joost;
Kroon, Wilco;
Delhaas, Tammo

Publication type:

Article

Dynamic Energy Landscapes of Riboswitches Help Interpret Conformational Rearrangements and Function.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 2, p. 1, doi. 10.1371/journal.pcbi.1002368

By:

Quarta, Giulio;
Sin, Ken;
Schlick, Tamar

Publication type:

Article

On the Effect of Thermodynamic Equilibrium on the Assembly Efficiency of Complex Multi-Layered Virus-Like Particles (VLP): the Case of Rotavirus VLP.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 2, p. 1, doi. 10.1371/journal.pcbi.1002367

By:

Roldão, António;
Mellado, Maria Candida M.;
Lima, J. C.;
Carrondo, Manuel J. T.;
Alves, Paula M.;
Oliveira, R.

Publication type:

Article

Use It and Improve It or Lose It: Interactions between Arm Function and Use in Humans Post-stroke.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 2, p. 1, doi. 10.1371/journal.pcbi.1002343

By:

Hidaka, Yukikazu;
Han, Cheol E.;
Wolf, Steven L.;
Winstein, Carolee J.;
Schweighofer, Nicolas

Publication type:

Article

Novel Approach to Meta-Analysis of Microarray Datasets Reveals Muscle Remodeling-related Drug Targets and Biomarkers in Duchenne Muscular Dystrophy.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 2, p. 1, doi. 10.1371/journal.pcbi.1002365

By:

Kotelnikova, Ekaterina;
Shkrob, Maria A.;
Pyatnitskiy, Mikhail A.;
Ferlini, Alessandra;
Daraselia, Nikolai

Publication type:

Article

Viral Proteins Acquired from a Host Converge to Simplified Domain Architectures.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 2, p. 1, doi. 10.1371/journal.pcbi.1002364

By:

Rappoport, Nadav;
Linial, Michal

Publication type:

Article

OptCom: A Multi-Level Optimization Framework for the Metabolic Modeling and Analysis of Microbial Communities.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 2, p. 1, doi. 10.1371/journal.pcbi.1002363

By:

Zomorrodi, Ali R.;
Maranas, Costas D.

Publication type:

Article

Human Visual Search Does Not Maximize the Post- Saccadic Probability of Identifying Targets.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 2, p. 1, doi. 10.1371/journal.pcbi.1002342

By:

Morvan, Camille;
Maloney, Laurence T.

Publication type:

Article

Minimal Size of Cell Assemblies Coordinated by Gamma Oscillations.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 2, p. 1, doi. 10.1371/journal.pcbi.1002362

By:

Börgers, Christoph;
Franzesi, Giovanni Talei;
LeBeau, Fiona E. N.;
Boyden, Edward S.;
Kopell, Nancy J.

Publication type:

Article

Early Warning Signals for Critical Transitions: A Generalized Modeling Approach.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 2, p. 1, doi. 10.1371/journal.pcbi.1002360

By:

Lade, Steven J.;
Gross, Thilo

Publication type:

Article

Stochastic De-repression of Rhodopsins in Single Photoreceptors of the Fly Retina.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 2, p. 1, doi. 10.1371/journal.pcbi.1002357

By:

Sood, Pranidhi;
Johnston Jr., Robert J.;
Kussell, Edo

Publication type:

Article