Works matching IS 1553734X AND DT 2011 AND VI 7 AND IP 3

Results: 44

Flexible Cognitive Strategies during Motor Learning.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 3, p. 1, doi. 10.1371/journal.pcbi.1001096

By:

Taylor, Jordan A.;
Ivry, Richard B.

Publication type:

Article

A Bayesian Approach to Analyse Genetic Variation within RNA Viral Populations.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 3, p. 1, doi. 10.1371/journal.pcbi.1002027

By:

McKinley, Trevelyan J.;
Murcia, Pablo R.;
Gog, Julia R.;
Varela, Mariana;
Wood, James L. N.

Publication type:

Article

On the Origin of DNA Genomes: Evolution of the Division of Labor between Template and Catalyst in Model Replicator Systems.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 3, p. 1, doi. 10.1371/journal.pcbi.1002024

By:

Nobuto Takeuchi1;
Hogeweg, Paulien;
Koonin, Eugene V.

Publication type:

Article

''Fluctuograms'' Reveal the Intermittent Intra-Protein Communication in Subtilisin Carlsberg and Correlate Mechanical Coupling with Co-Evolution.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 3, p. 1, doi. 10.1371/journal.pcbi.1002023

By:

Silvestre-Ryan, Jordi;
Yuchun Lin;
Jhih-Wei Chu

Publication type:

Article

Mechanisms of Magnetic Stimulation of Central Nervous System Neurons.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 3, p. 1, doi. 10.1371/journal.pcbi.1002022

By:

Tamar Pashut1;
Wolfus, Shuki;
Friedman, Alex;
Lavidor, Michal;
Bar-Gad, Izhar;
Yeshurun, Yosef;
Korngreen, Alon

Publication type:

Article

The Roots of Bioinformatics in Theoretical Biology.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 3, p. 1, doi. 10.1371/journal.pcbi.1002021

By:

Hogeweg, Paulien

Publication type:

Article

Molecular Mechanism of Cyclodextrin Mediated Cholesterol Extraction.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 3, p. 1, doi. 10.1371/journal.pcbi.1002020

By:

López, Cesar A.;
de Vries, Alex H.;
Marrink, Siewert J.

Publication type:

Article

PLoS Computational Biology Conference Postcard from PSB 2011.

Published in:

2011

By:

Eren, A. Murat

Publication type:

Opinion

Genome-Scale Metabolic Modeling Elucidates the Role of Proliferative Adaptation in Causing the Warburg Effect.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 3, p. 1, doi. 10.1371/journal.pcbi.1002018

By:

Shlomi, Tomer;
Benyamini, Tomer;
Gottlieb, Eyal;
Sharan, Roded;
Ruppin, Eytan

Publication type:

Article

Dynamic Phenotypic Clustering in Noisy Ecosystems.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 3, p. 1, doi. 10.1371/journal.pcbi.1002017

By:

Ernebjerg, Morten;
Kishony, Roy

Publication type:

Article

Exploring Off-Targets and Off-Systems for Adverse Drug Reactions via Chemical-Protein Interactome -- Clozapine-Induced Agranulocytosis as a Case Study.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 3, p. 1, doi. 10.1371/journal.pcbi.1002016

By:

Lun Yang;
Kejian Wang;
Jian Chen;
Jegga, Anil G.;
Heng Luo;
Leming Shi;
Chunling Wan;
Xizhi Guo;
Shengying Qin;
Guang He;
Guoyin Feng;
Lin He

Publication type:

Article

Autonomous Targeting of Infectious Superspreaders Using Engineered Transmissible Therapies.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 3, p. 1, doi. 10.1371/journal.pcbi.1002015

By:

Metzger, Vincent T.;
Lloyd-Smith, James O.;
Weinberger, Leor S.

Publication type:

Article

Frequency-Invariant Representation of Interaural Time Differences in Mammals.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 3, p. 1, doi. 10.1371/journal.pcbi.1002013

By:

Hannes Lü ling1,2;
Siveke, Ida;
Grothe, Benedikt;
Leibold, Christian

Publication type:

Article

Learning from Sensory and Reward Prediction Errors during Motor Adaptation.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 3, p. 1, doi. 10.1371/journal.pcbi.1002012

By:

Izawa, Jun;
Shadmehr, Reza

Publication type:

Article

Blockade of Neuronal α7-nAChR by α-Conotoxin ImI Explained by Computational Scanning and Energy Calculations.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 3, p. 1, doi. 10.1371/journal.pcbi.1002011

By:

Yu, Rilei;
Craik, David J.;
Kaas, Quentin

Publication type:

Article

Noise Contributions in an Inducible Genetic Switch: A Whole-Cell Simulation Study.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 3, p. 1, doi. 10.1371/journal.pcbi.1002010

By:

Roberts, Elijah;
Magis, Andrew;
Ortiz, Julio O.;
Baumeister, Wolfgang;
Luthey-Schulten, Zaida

Publication type:

Article

No Need for a Cognitive Map: Decentralized Memory for Insect Navigation.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 3, p. 1, doi. 10.1371/journal.pcbi.1002009

By:

Cruse, Holk;
Wehner, Rüdiger

Publication type:

Article

Animal Interactions and the Emergence of Territoriality.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 3, p. 1, doi. 10.1371/journal.pcbi.1002008

By:

Giuggioli, Luca;
Potts, Jonathan R.;
Harris, Stephen

Publication type:

Article

Crawling Cells Can Close Wounds without Purse Strings or Signaling.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 3, p. 1, doi. 10.1371/journal.pcbi.1002007

By:

Lee, Pilhwa;
Wolgemuth, Charles W.

Publication type:

Article

To Lyse or Not to Lyse: Transient-Mediated Stochastic Fate Determination in Cells Infected by Bacteriophages.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 3, p. 1, doi. 10.1371/journal.pcbi.1002006

By:

Joh, Richard I.;
Weitz, Joshua S.

Publication type:

Article

Noise Driven Evolutionary Waves.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 3, p. 1, doi. 10.1371/journal.pcbi.1002005

By:

Hallatschek, Oskar

Publication type:

Article

Conformational Sampling and Nucleotide-Dependent Transitions of the GroEL Subunit Probed by Unbiased Molecular Dynamics Simulations.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 3, p. 1, doi. 10.1371/journal.pcbi.1002004

By:

Skjaerven, Lars;
Grant, Barry;
Muga, Arturo;
Teigen, Knut;
McCammon, J. Andrew;
Reuter, Nathalie;
Martinez, Aurora

Publication type:

Article

Reconciliation of Genome-Scale Metabolic Reconstructions for Comparative Systems Analysis.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 3, p. 1, doi. 10.1371/journal.pcbi.1001116

By:

Oberhardt, Matthew A.;
Puchalka, Jacek;
dos Santos, Vítor A. P. Martins;
Papin, Jason A.

Publication type:

Article

Reactive Oxygen Species Production by Forward and Reverse Electron Fluxes in the Mitochondrial Respiratory Chain.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 3, p. 1, doi. 10.1371/journal.pcbi.1001115

By:

Selivanov, Vitaly A.;
Votyakova, Tatyana V.;
Pivtoraiko, Violetta N.;
Zeak, Jennifer;
Sukhomlin, Tatiana;
Trucco, Massimo;
Roca, Josep;
Cascante, Marta

Publication type:

Article

CAERUS: Predicting CAncER oUtcomeS Using Relationship between Protein Structural Information, Protein Networks, Gene Expression Data, and Mutation Data.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 3, p. 1, doi. 10.1371/journal.pcbi.1001114

By:

Kelvin Xi Zhang;
Ouellette, B. F. Francis

Publication type:

Article

Consensus-Phenotype Integration of Transcriptomic and Metabolomic Data Implies a Role for Metabolism in the Chemosensitivity of Tumour Cells.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 3, p. 1, doi. 10.1371/journal.pcbi.1001113

By:

Cavill, Rachel;
Kamburov, Atanas;
Ellis1, James K.;
Athersuch, Toby J.;
Blagrove, Marcus S. C.;
Herwig, Ralf;
Ebbels, Timothy M. D.;
Keun, Hector C.

Publication type:

Article

Inferring Visuomotor Priors for Sensorimotor Learning.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 3, p. 1, doi. 10.1371/journal.pcbi.1001112

By:

Edward J. A. Turnham;
Braun, Daniel A.;
Wolpert, Daniel M.

Publication type:

Article

Minimal Models of Multidimensional Computations.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 3, p. 1, doi. 10.1371/journal.pcbi.1001111

By:

Fitzgerald, Jeffrey D.;
Sincich, Lawrence C.;
Sharpee, Tatyana O.

Publication type:

Article

A Granger Causality Measure for Point Process Models of Ensemble Neural Spiking Activity.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 3, p. 1, doi. 10.1371/journal.pcbi.1001110

By:

Sanggyun Kim;
Putrino, David;
Ghosh, Soumya;
Brown, Emery N.

Publication type:

Article

Simulated Epidemics in an Empirical Spatiotemporal Network of 50,185 Sexual Contacts.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 3, p. 1, doi. 10.1371/journal.pcbi.1001109

By:

Rocha, Luis E. C.;
Liljeros, Fredrik;
Holme, Petter

Publication type:

Article

A Compact Statistical Model of the Song Syntax in Bengalese Finch.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 3, p. 1, doi. 10.1371/journal.pcbi.1001108

By:

Jin, Dezhe Z.;
Kozhevnikov, Alexay A.

Publication type:

Article

Human Leg Model Predicts Ankle Muscle-Tendon Morphology, State, Roles and Energetics in Walking.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 3, p. 1, doi. 10.1371/journal.pcbi.1001107

By:

Krishnaswamy, Pavitra;
Brown, Emery N.;
Herr, Hugh M.

Publication type:

Article

Causal Modeling Using Network Ensemble Simulations of Genetic and Gene Expression Data Predicts Genes Involved in Rheumatoid Arthritis.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 3, p. 1, doi. 10.1371/journal.pcbi.1001105

By:

Heming Xing1;
McDonagh, Paul D.;
Bienkowska2, Jadwiga;
Cashorali, Tanya;
Runge, Karl;
Miller, Robert E.;
DeCaprio, Dave;
Church, Bruce;
Roubenoff, Ronenn;
Khalil, Iya G.;
Carulli, John

Publication type:

Article

Context-Dependent Encoding of Fear and Extinction Memories in a Large-Scale Network Model of the Basal Amygdala.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 3, p. 1, doi. 10.1371/journal.pcbi.1001104

By:

Ioannis Vlachos;
Herry, Cyril;
Lüthi, Andreas;
Aertsen, Ad;
Kumar, Arvind

Publication type:

Article

Quantification of the Relative Importance of CTL, B Cell, NK Cell, and Target Cell Limitation in the Control of Primary SIV-Infection.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 3, p. 1, doi. 10.1371/journal.pcbi.1001103

By:

Elemans, Marjet;
Thiébaut, Rodolphe;
Kaur, Amitinder;
Asquith, Becca

Publication type:

Article

Accurate and Fast Simulation of Channel Noise in Conductance-Based Model Neurons by Diffusion Approximation.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 3, p. 1, doi. 10.1371/journal.pcbi.1001102

By:

Linaro, Daniele;
Storace, Marco;
Giugliano, Michele

Publication type:

Article

The Role of Incoherent MicroRNA-Mediated Feedforward Loops in Noise Buffering.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 3, p. 1, doi. 10.1371/journal.pcbi.1001101

By:

Osella, Matteo;
Bosia, Carla;
Corá, Davide;
Caselle, Michele

Publication type:

Article

Effect of Promoter Architecture on the Cell-to-Cell Variability in Gene Expression.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 3, p. 1, doi. 10.1371/journal.pcbi.1001100

By:

Sanchez, Alvaro;
Garcia, Hernan G.;
Jones, Daniel;
Phillips, Rob;
Kondev, Jané

Publication type:

Article

Training Signaling Pathway Maps to Biochemical Data with Constrained Fuzzy Logic: Quantitative Analysis of Liver Cell Responses to Inflammatory Stimuli.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 3, p. 1, doi. 10.1371/journal.pcbi.1001099

By:

Morris, Melody K.;
Saez-Rodriguez, Julio;
Clarke, David C.;
Sorger, Peter K.;
Lauffenburger, Douglas A.

Publication type:

Article

Nucleotide Binding Switches the Information Flow in Ras GTPases.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 3, p. 1, doi. 10.1371/journal.pcbi.1001098

By:

Raimondi, Francesco;
Portella, Guillem;
Orozco, Modesto;
Fanelli, Francesca

Publication type:

Article

Dynamic Conformational Changes in MUNC18 Prevent Syntaxin Binding.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 3, p. 1, doi. 10.1371/journal.pcbi.1001097

By:

Bar-On1,2, Dana;
Nachlie, Esther;
Gutman, Menachem;
Ashery, Uri

Publication type:

Article

Identifying Causal Genes and Dysregulated Pathways in Complex Diseases.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 3, p. 1, doi. 10.1371/journal.pcbi.1001095

By:

Yoo-Ah Kim;
Wuchty, Stefan;
Przytycka, Teresa M.

Publication type:

Article

Informed Switching Strongly Decreases the Prevalence of Antibiotic Resistance in Hospital Wards.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 3, p. 1, doi. 10.1371/journal.pcbi.1001094

By:

Kouyos, Roger D.;
zur Wiesch, Pia Abel;
Bonhoeffer, Sebastian

Publication type:

Article

Natural Selection on Functional Modules, a Genome-Wide Analysis.

Published in:

PLoS Computational Biology, 2011, v. 7, n. 3, p. 1, doi. 10.1371/journal.pcbi.1001093

By:

Serra, François;
Arbiza, Leonardo;
Dopazo, Joaquín;
Dopazo, Hernán

Publication type:

Article