Works matching IS 1553734X AND DT 2008 AND VI 4 AND IP 8

Results: 38

Network Inference Algorithms Elucidate Nrf2 Regulation of Mouse Lung Oxidative Stress.

Published in:

PLoS Computational Biology, 2008, v. 4, n. 8, p. 1, doi. 10.1371/journal.pcbi.1000166

By:

Taylor, Ronald C.;
Acquaah-Mensah, George;
Singhal, Mudita;
Malhotra, Deepti;
Biswal, Shyam

Publication type:

Article

Noise Reduction by Diffusional Dissipation in a Minimal Quorum Sensing Motif.

Published in:

PLoS Computational Biology, 2008, v. 4, n. 8, p. 1, doi. 10.1371/journal.pcbi.1000167

By:

Yu Tanouchi;
Tu, Dennis;
Jungsang Kim;
Lingchong You

Publication type:

Article

Cooperative Transition between Open and Closed Conformations in Potassium Channels.

Published in:

PLoS Computational Biology, 2008, v. 4, n. 8, p. 1, doi. 10.1371/journal.pcbi.1000164

By:

Haliloglu, Turkan;
Nir Ben-Tal

Publication type:

Article

Inference of Protein Complex Activities from Chemical- Genetic Profile and Its Applications: Predicting Drug- Target Pathways.

Published in:

PLoS Computational Biology, 2008, v. 4, n. 8, p. 1, doi. 10.1371/journal.pcbi.1000162

By:

Han, Sangjo;
Dongsup Kim

Publication type:

Article

Biophysical Parameters Modification Could Overcome Essential Hearing Gaps.

Published in:

PLoS Computational Biology, 2008, v. 4, n. 8, p. 1, doi. 10.1371/journal.pcbi.1000161

By:

Kern, A.;
Heid, C.;
Steeb, W.-H.;
Stoop, N.;
Stoop, R.

Publication type:

Article

Combining Structural Connectivity and Response Latencies to Model the Structure of the Visual System.

Published in:

PLoS Computational Biology, 2008, v. 4, n. 8, p. 1, doi. 10.1371/journal.pcbi.1000159

By:

Capalbo, Michael;
Postma, Eric;
Goebel, Rainer

Publication type:

Article

Modeling ChIP Sequencing In Silico with Applications.

Published in:

PLoS Computational Biology, 2008, v. 4, n. 8, p. 1, doi. 10.1371/journal.pcbi.1000158

By:

Zhang, Zhengdong D.;
Rozowsky, Joel;
Snyder, Michael;
Chang, Joseph;
Gerstein, Mark

Publication type:

Article

Nonlinear Muscles, Passive Viscoelasticity and Body Taper Conspire To Create Neuromechanical Phase Lags in Anguilliform Swimmers.

Published in:

PLoS Computational Biology, 2008, v. 4, n. 8, p. 1, doi. 10.1371/journal.pcbi.1000157

By:

McMillen, T.;
Williams, T.;
Holmes, P.

Publication type:

Article

PhyloGibbs-MP: Module Prediction and Discriminative Motif-Finding by Gibbs Sampling.

Published in:

PLoS Computational Biology, 2008, v. 4, n. 8, p. 1, doi. 10.1371/journal.pcbi.1000156

By:

Siddharthan, Rahul

Publication type:

Article

The Effect of a Δ K280 Mutation on the Unfolded State of a Microtubule-Binding Repeat in Tau.

Published in:

PLoS Computational Biology, 2008, v. 4, n. 8, p. 1, doi. 10.1371/journal.pcbi.1000155

By:

Huang, Austin;
Stultz, Collin M.

Publication type:

Article

A Feature-Based Approach to Modeling Protein--DNA Interactions.

Published in:

PLoS Computational Biology, 2008, v. 4, n. 8, p. 1, doi. 10.1371/journal.pcbi.1000154

By:

Sharon, Eilon;
Lubliner, Shai;
Segal, Eran

Publication type:

Article

Structure and Dynamics of Interphase Chromosomes.

Published in:

PLoS Computational Biology, 2008, v. 4, n. 8, p. 1, doi. 10.1371/journal.pcbi.1000153

By:

Rosa, Angelo;
Everaers, Ralf

Publication type:

Article

A Novel Three-Phase Model of Brain Tissue Microstructure.

Published in:

PLoS Computational Biology, 2008, v. 4, n. 8, p. 1, doi. 10.1371/journal.pcbi.1000152

By:

Gevertz, Jana L.;
Torquato, Salvatore

Publication type:

Article

Self Containment, a Property of Modular RNA Structures, Distinguishes microRNAs.

Published in:

PLoS Computational Biology, 2008, v. 4, n. 8, p. 1, doi. 10.1371/journal.pcbi.1000150

By:

Lee, Miler T.;
Junhyong Kim

Publication type:

Article

Coordinate Regulation of G Protein Signaling via Dynamic Interactions of Receptor and GAP.

Published in:

PLoS Computational Biology, 2008, v. 4, n. 8, p. 1, doi. 10.1371/journal.pcbi.1000148

By:

Turcotte, Marc;
Wei Tang;
Ross, Elliott M.

Publication type:

Article

Retroviral Integration Process in the Human Genome: Is It Really Non-Random? A New Statistical Approach.

Published in:

PLoS Computational Biology, 2008, v. 4, n. 8, p. 1, doi. 10.1371/journal.pcbi.1000144

By:

Ambrosi, Alessandro;
Cattoglio, Claudia;
Di Serio, Clelia

Publication type:

Article

Host Control of Malaria Infections: Constraints on Immune and Erythropoeitic Response Kinetics.

Published in:

PLoS Computational Biology, 2008, v. 4, n. 8, p. 1, doi. 10.1371/journal.pcbi.1000149

By:

McQueen, Philip G.;
McKenzie, F. Ellis

Publication type:

Article

Classifying RNA-Binding Proteins Based on Electrostatic Properties.

Published in:

PLoS Computational Biology, 2008, v. 4, n. 8, p. 1, doi. 10.1371/journal.pcbi.1000146

By:

Shazman, Shula;
Mandel-Gutfreund, Yael

Publication type:

Article

Intramolecular Cohesion of Coils Mediated by Phenylalanine--Glycine Motifs in the Natively Unfolded Domain of a Nucleoporin.

Published in:

PLoS Computational Biology, 2008, v. 4, n. 8, p. 1, doi. 10.1371/journal.pcbi.1000145

By:

Krishnan, V. V.;
Lau, Edmond Y.;
Yamada, Justin;
Denning, Daniel P.;
Patel, Samir S.;
Colvin, Michael E.;
Rexach, Michael F.

Publication type:

Article

A General Definition and Nomenclature for Alternative Splicing Events.

Published in:

PLoS Computational Biology, 2008, v. 4, n. 8, p. 1, doi. 10.1371/journal.pcbi.1000147

By:

Sammeth, Michael;
Foissac, Sylvain;
Guigo, Roderic

Publication type:

Article

Falling towards Forgetfulness: Synaptic Decay Prevents Spontaneous Recovery of Memory.

Published in:

PLoS Computational Biology, 2008, v. 4, n. 8, p. 1, doi. 10.1371/journal.pcbi.1000143

By:

Stone, James V.;
Jupp, Peter E.

Publication type:

Article

Innate Visual Learning through Spontaneous Activity Patterns.

Published in:

PLoS Computational Biology, 2008, v. 4, n. 8, p. 1, doi. 10.1371/journal.pcbi.1000137

By:

Albert, Mark V.;
Schnabel, Adam;
Field, David J.

Publication type:

Article

Embedding mRNA Stability in Correlation Analysis of Time-Series Gene Expression Data.

Published in:

PLoS Computational Biology, 2008, v. 4, n. 8, p. 1, doi. 10.1371/journal.pcbi.1000141

By:

Farina, Lorenzo;
De Santis, Alberto;
Salvucci, Samanta;
Morelli, Giorgio;
Ruberti, Ida

Publication type:

Article

Why Do Hubs in the Yeast Protein Interaction Network Tend To Be Essential: Reexamining the Connection between the Network Topology and Essentiality.

Published in:

PLoS Computational Biology, 2008, v. 4, n. 8, p. 1, doi. 10.1371/journal.pcbi.1000140

By:

Zotenko, Elena;
Mestre, Julian;
O'Leary, Dianne P.;
Przytycka, Teresa M.

Publication type:

Article

A Model of Stimulus-Specific Neural Assemblies in the Insect Antennal Lobe.

Published in:

PLoS Computational Biology, 2008, v. 4, n. 8, p. 1, doi. 10.1371/journal.pcbi.1000139

By:

Martinez, Dominique;
Montejo, Noelia

Publication type:

Article

Identification and Rational Redesign of Peptide Ligands to CRIP1, A Novel Biomarker for Cancers.

Published in:

PLoS Computational Biology, 2008, v. 4, n. 8, p. 1, doi. 10.1371/journal.pcbi.1000138

By:

Jihua Hao;
Serohijos, Adrian W. R.;
Newton, Gail;
Tassone, Gina;
Zuncai Wang;
Sgroi, Dennis C.;
Dokholyan, Nikolay V.;
Basilion, James P.

Publication type:

Article

Evolutionarily Conserved Substrate Substructures for Automated Annotation of Enzyme Superfamilies.

Published in:

PLoS Computational Biology, 2008, v. 4, n. 8, p. 1, doi. 10.1371/journal.pcbi.1000142

By:

Chiang, Ranyee A.;
Sali, Andrej;
Babbitt, Patricia C.

Publication type:

Article

Predicting Human Nucleosome Occupancy from Primary Sequence.

Published in:

PLoS Computational Biology, 2008, v. 4, n. 8, p. 1, doi. 10.1371/journal.pcbi.1000134

By:

Gupta, Shobhit;
Dennis, Jonathan;
Thurman, Robert E.;
Kingston, Robert;
Stamatoyannopoulos, John A.;
Noble, William Stafford

Publication type:

Article

Stroke Rehabilitation Reaches a Threshold.

Published in:

PLoS Computational Biology, 2008, v. 4, n. 8, p. 1, doi. 10.1371/journal.pcbi.1000133

By:

Han, Cheol E.;
Arbib, Michael A.;
Schweighofer, Nicolas

Publication type:

Article

Modeling the Violation of Reward Maximization and Invariance in Reinforcement Schedules.

Published in:

PLoS Computational Biology, 2008, v. 4, n. 8, p. 1, doi. 10.1371/journal.pcbi.1000131

By:

La Camera, Giancarlo;
Richmond, Barry J.

Publication type:

Article

Allosteric Communication in Myosin V: From Small Conformational Changes to Large Directed Movements.

Published in:

PLoS Computational Biology, 2008, v. 4, n. 8, p. 1, doi. 10.1371/journal.pcbi.1000129

By:

Cecchini, M.;
Houdusse, A.;
Karplus, M.

Publication type:

Article

Getting Started in Computational Immunology.

Published in:

PLoS Computational Biology, 2008, v. 4, n. 8, p. 1, doi. 10.1371/journal.pcbi.1000128

By:

Kleinstein, Steven H.

Publication type:

Article

Regulatory Control and the Costs and Benefits of Biochemical Noise.

Published in:

PLoS Computational Biology, 2008, v. 4, n. 8, p. 1, doi. 10.1371/journal.pcbi.1000125

By:

Tănase-Nicola, Sorin;
ten Wolde, Pieter Rein

Publication type:

Article

Efficient Algorithms for Probing the RNA Mutation Landscape.

Published in:

PLoS Computational Biology, 2008, v. 4, n. 8, p. 1, doi. 10.1371/journal.pcbi.1000124

By:

Waldispühl, Jérôme;
Devadas, Srinivas;
Berger, Bonnie;
Clote, Peter

Publication type:

Article

Geometric Interpretation of Gene Coexpression Network Analysis.

Published in:

PLoS Computational Biology, 2008, v. 4, n. 8, p. 1, doi. 10.1371/journal.pcbi.1000117

By:

Horvath, Steve;
Dong, Jun

Publication type:

Article

The Dynamic Brain: From Spiking Neurons to Neural Masses and Cortical Fields.

Published in:

PLoS Computational Biology, 2008, v. 4, n. 8, p. 1, doi. 10.1371/journal.pcbi.1000092

By:

Deco, Gustavo;
Jirsa, Viktor K.;
Robinson, Peter A.;
Breakspear, Michael;
Friston, Karl

Publication type:

Article

Mean-Fields and Neural Masses.

Published in:

2008

By:

Friston, Karl

Publication type:

Editorial

Genome-Scale Computational Biology and Bioinformatics in Australia.

Published in:

2008

By:

Ragan, Mark A.;
Littlejohn, Tim;
Ross, Bruce

Publication type:

Opinion