Found: 68
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Analytical kinetic model of native tandem promoters in E. coli.
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- PLoS Computational Biology, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.pcbi.1009824
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Identification of dynamic mass-action biochemical reaction networks using sparse Bayesian methods.
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- PLoS Computational Biology, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.pcbi.1009830
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Criticality enhances the multilevel reliability of stimulus responses in cortical neural networks.
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- PLoS Computational Biology, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.pcbi.1009848
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Nurturing diversity and inclusion in AI in Biomedicine through a virtual summer program for high school students.
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- PLoS Computational Biology, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.pcbi.1009719
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Fast and accurate influenza forecasting in the United States with Inferno.
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- PLoS Computational Biology, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.pcbi.1008651
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Sparse connectivity for MAP inference in linear models using sister mitral cells.
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- PLoS Computational Biology, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.pcbi.1009808
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Traveling waves in the prefrontal cortex during working memory.
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- PLoS Computational Biology, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.pcbi.1009827
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From complete cross-docking to partners identification and binding sites predictions.
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- PLoS Computational Biology, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.pcbi.1009825
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Positional SHAP (PoSHAP) for Interpretation of machine learning models trained from biological sequences.
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- PLoS Computational Biology, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.pcbi.1009736
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Parametric Copula-GP model for analyzing multidimensional neuronal and behavioral relationships.
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- PLoS Computational Biology, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.pcbi.1009799
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Adhesion-regulated junction slippage controls cell intercalation dynamics in an Apposed-Cortex Adhesion Model.
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- PLoS Computational Biology, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.pcbi.1009812
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A three-dimensional multiscale model for the prediction of thrombus growth under flow with single-platelet resolution.
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- PLoS Computational Biology, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.pcbi.1009850
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Modeling the temporal dynamics of master regulators and CtrA proteolysis in Caulobacter crescentus cell cycle.
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- PLoS Computational Biology, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.pcbi.1009847
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Project-based learning course on metabolic network modelling in computational systems biology.
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- PLoS Computational Biology, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.pcbi.1009711
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Dose-dependent thresholds of dexamethasone destabilize CAR T-cell treatment efficacy.
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- PLoS Computational Biology, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.pcbi.1009504
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Machine learning-driven identification of drugs inhibiting cytochrome P450 2C9.
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- PLoS Computational Biology, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.pcbi.1009820
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AIME: Autoencoder-based integrative multi-omics data embedding that allows for confounder adjustments.
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- PLoS Computational Biology, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.pcbi.1009826
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McComedy: A user-friendly tool for next-generation individual-based modeling of microbial consumer-resource systems.
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- PLoS Computational Biology, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.pcbi.1009777
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Foraging as sampling without replacement: A Bayesian statistical model for estimating biases in target selection.
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- PLoS Computational Biology, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.pcbi.1009813
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Dynamic inference of cell developmental complex energy landscape from time series single-cell transcriptomic data.
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- PLoS Computational Biology, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.pcbi.1009821
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Efficient ReML inference in variance component mixed models using a Min-Max algorithm.
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- PLoS Computational Biology, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.pcbi.1009659
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The structural coverage of the human proteome before and after AlphaFold.
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- PLoS Computational Biology, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.pcbi.1009818
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Polypolish: Short-read polishing of long-read bacterial genome assemblies.
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- PLoS Computational Biology, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.pcbi.1009802
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Constrained brain volume in an efficient coding model explains the fraction of excitatory and inhibitory neurons in sensory cortices.
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- PLoS Computational Biology, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.pcbi.1009642
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Discovering adaptation-capable biological network structures using control-theoretic approaches.
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- PLoS Computational Biology, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.pcbi.1009769
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Bringing bioinformatics to schools with the 4273pi project.
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- PLoS Computational Biology, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.pcbi.1009705
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CRBPDL: Identification of circRNA-RBP interaction sites using an ensemble neural network approach.
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- PLoS Computational Biology, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.pcbi.1009798
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Fine-scale estimation of effective reproduction numbers for dengue surveillance.
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- PLoS Computational Biology, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.pcbi.1009791
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Use of Raman and Raman optical activity to extract atomistic details of saccharides in aqueous solution.
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- PLoS Computational Biology, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.pcbi.1009678
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Evolution enhances mutational robustness and suppresses the emergence of a new phenotype: A new computational approach for studying evolution.
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- PLoS Computational Biology, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.pcbi.1009796
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Extended ensemble simulations of a SARS-CoV-2 nsp1–5'-UTR complex.
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- PLoS Computational Biology, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.pcbi.1009804
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Controlling gene expression timing through gene regulatory architecture.
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- PLoS Computational Biology, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.pcbi.1009745
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Full scale structural, mechanical and dynamical properties of HIV-1 liposomes.
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- PLoS Computational Biology, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.pcbi.1009781
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The evolutionary maintenance of Lévy flight foraging.
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- PLoS Computational Biology, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.pcbi.1009490
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Ictal wavefront propagation in slices and simulations with conductance-based refractory density model.
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- PLoS Computational Biology, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.pcbi.1009782
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A deep generative model of 3D single-cell organization.
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- PLoS Computational Biology, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.pcbi.1009155
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Characterizing non-exponential growth and bimodal cell size distributions in fission yeast: An analytical approach.
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- PLoS Computational Biology, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.pcbi.1009793
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Longitudinally monitored immune biomarkers predict the timing of COVID-19 outcomes.
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- PLoS Computational Biology, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.pcbi.1009778
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Diversity of synaptic protein complexes as a function of the abundance of their constituent proteins: A modeling approach.
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- PLoS Computational Biology, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.pcbi.1009758
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DeLTA 2.0: A deep learning pipeline for quantifying single-cell spatial and temporal dynamics.
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- PLoS Computational Biology, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.pcbi.1009797
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Simulated poaching affects global connectivity and efficiency in social networks of African savanna elephants—An exemplar of how human disturbance impacts group-living species.
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- PLoS Computational Biology, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.pcbi.1009792
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Ultrafast population coding and axo-somatic compartmentalization.
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- PLoS Computational Biology, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.pcbi.1009775
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Data-driven modeling predicts gene regulatory network dynamics during the differentiation of multipotential hematopoietic progenitors.
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- PLoS Computational Biology, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.pcbi.1009779
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Computable early Caenorhabditis elegans embryo with a phase field model.
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- PLoS Computational Biology, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.pcbi.1009755
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A Bayesian approach to modeling phytoplankton population dynamics from size distribution time series.
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- PLoS Computational Biology, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.pcbi.1009733
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Identification of periodic attractors in Boolean networks using a priori information.
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- PLoS Computational Biology, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.pcbi.1009702
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An initial 'snapshot' of sensory information biases the likelihood and speed of subsequent changes of mind.
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- PLoS Computational Biology, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.pcbi.1009738
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Using population-specific add-on polymorphisms to improve genotype imputation in underrepresented populations.
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- PLoS Computational Biology, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.pcbi.1009628
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Dominating lengthscales of zebrafish collective behaviour.
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- PLoS Computational Biology, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.pcbi.1009394
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Optimism and pessimism in optimised replay.
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- PLoS Computational Biology, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.pcbi.1009634
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