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Extracellular matrix density regulates the formation of tumour spheroids through cell migration.
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- PLoS Computational Biology, 2021, v. 17, n. 2, p. 1, doi. 10.1371/journal.pcbi.1008764
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Generating functional protein variants with variational autoencoders.
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- PLoS Computational Biology, 2021, v. 17, n. 2, p. 1, doi. 10.1371/journal.pcbi.1008736
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Evidence for spreading seizure as a cause of theta-alpha activity electrographic pattern in stereo-EEG seizure recordings.
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- PLoS Computational Biology, 2021, v. 17, n. 2, p. 1, doi. 10.1371/journal.pcbi.1008731
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Estimating the cumulative incidence of SARS-CoV-2 with imperfect serological tests: Exploiting cutoff-free approaches.
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- PLoS Computational Biology, 2021, v. 17, n. 2, p. 1, doi. 10.1371/journal.pcbi.1008728
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Balrog: A universal protein model for prokaryotic gene prediction.
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- PLoS Computational Biology, 2021, v. 17, n. 2, p. 1, doi. 10.1371/journal.pcbi.1008727
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Integrated information structure collapses with anesthetic loss of conscious arousal in Drosophila melanogaster.
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- PLoS Computational Biology, 2021, v. 17, n. 2, p. 1, doi. 10.1371/journal.pcbi.1008722
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- Article
Ancestral haplotype reconstruction in endogamous populations using identity-by-descent.
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- PLoS Computational Biology, 2021, v. 17, n. 2, p. 1, doi. 10.1371/journal.pcbi.1008638
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Impact of between-tissue differences on pan-cancer predictions of drug sensitivity.
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- PLoS Computational Biology, 2021, v. 17, n. 2, p. 1, doi. 10.1371/journal.pcbi.1008720
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Ten simple rules for hosting artists in a scientific lab.
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- 2021
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- Publication type:
- Editorial
An integrated, modular approach to data science education in microbiology.
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- PLoS Computational Biology, 2021, v. 17, n. 2, p. 1, doi. 10.1371/journal.pcbi.1008661
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Ten simple rules for writing compelling recommendation letters.
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- 2021
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- Publication type:
- Editorial
Evolution of heterogeneous perceptual limits and indifference in competitive foraging.
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- PLoS Computational Biology, 2021, v. 17, n. 2, p. 1, doi. 10.1371/journal.pcbi.1008734
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- Article
Computational modeling of the gut microbiota reveals putative metabolic mechanisms of recurrent Clostridioides difficile infection.
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- PLoS Computational Biology, 2021, v. 17, n. 2, p. 1, doi. 10.1371/journal.pcbi.1008782
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On the evolution and development of morphological complexity: A view from gene regulatory networks.
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- PLoS Computational Biology, 2021, v. 17, n. 2, p. 1, doi. 10.1371/journal.pcbi.1008570
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Correction: Biophysically grounded mean-field models of neural populations under electrical stimulation.
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- 2021
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- Correction Notice
Hybridized distance- and contact-based hierarchical structure modeling for folding soluble and membrane proteins.
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- PLoS Computational Biology, 2021, v. 17, n. 2, p. 1, doi. 10.1371/journal.pcbi.1008753
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Using a multiple-delivery-mode training approach to develop local capacity and infrastructure for advanced bioinformatics in Africa.
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- PLoS Computational Biology, 2021, v. 17, n. 2, p. 1, doi. 10.1371/journal.pcbi.1008640
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Using prototyping to choose a bioinformatics workflow management system.
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- PLoS Computational Biology, 2021, v. 17, n. 2, p. 1, doi. 10.1371/journal.pcbi.1008622
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- Article
Calcium-vesicles perform active diffusion in the sea urchin embryo during larval biomineralization.
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- PLoS Computational Biology, 2021, v. 17, n. 2, p. 1, doi. 10.1371/journal.pcbi.1008780
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- Article
Nonlinear effects of intrinsic dynamics on temporal encoding in a model of avian auditory cortex.
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- PLoS Computational Biology, 2021, v. 17, n. 2, p. 1, doi. 10.1371/journal.pcbi.1008768
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- Article
A mathematical model of the role of aggregation in sonic hedgehog signalling.
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- PLoS Computational Biology, 2021, v. 17, n. 2, p. 1, doi. 10.1371/journal.pcbi.1008562
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- Article
Rapid 3D phenotypic analysis of neurons and organoids using data-driven cell segmentation-free machine learning.
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- PLoS Computational Biology, 2021, v. 17, n. 2, p. 1, doi. 10.1371/journal.pcbi.1008630
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- Article
Spectrally specific temporal analyses of spike-train responses to complex sounds: A unifying framework.
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- PLoS Computational Biology, 2021, v. 17, n. 2, p. 1, doi. 10.1371/journal.pcbi.1008155
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- Article
Quantitative profiling of protease specificity.
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- PLoS Computational Biology, 2021, v. 17, n. 2, p. 1, doi. 10.1371/journal.pcbi.1008101
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- Article
Margination and adhesion dynamics of tumor cells in a real microvascular network.
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- PLoS Computational Biology, 2021, v. 17, n. 2, p. 1, doi. 10.1371/journal.pcbi.1008746
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- Article
An antigenic diversification threshold for falciparum malaria transmission at high endemicity.
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- PLoS Computational Biology, 2021, v. 17, n. 2, p. 1, doi. 10.1371/journal.pcbi.1008729
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- Article
Efficient and flexible Integration of variant characteristics in rare variant association studies using integrated nested Laplace approximation.
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- PLoS Computational Biology, 2021, v. 17, n. 2, p. 1, doi. 10.1371/journal.pcbi.1007784
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- Article
Deep6mA: A deep learning framework for exploring similar patterns in DNA N6-methyladenine sites across different species.
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- PLoS Computational Biology, 2021, v. 17, n. 2, p. 1, doi. 10.1371/journal.pcbi.1008767
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- Article
Cholinergic neuromodulation of inhibitory interneurons facilitates functional integration in whole-brain models.
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- PLoS Computational Biology, 2021, v. 17, n. 2, p. 1, doi. 10.1371/journal.pcbi.1008737
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- Article
Positive interactions within and between populations decrease the likelihood of evolutionary rescue.
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- PLoS Computational Biology, 2021, v. 17, n. 2, p. 1, doi. 10.1371/journal.pcbi.1008732
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- Article
Sensing ecosystem dynamics via audio source separation: A case study of marine soundscapes off northeastern Taiwan.
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- PLoS Computational Biology, 2021, v. 17, n. 2, p. 1, doi. 10.1371/journal.pcbi.1008698
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Ten simple rules for starting (and sustaining) an academic data science initiative.
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- 2021
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- Publication type:
- Editorial
Ten simple rules for getting started with command-line bioinformatics.
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- 2021
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- Publication type:
- Editorial
Ten simple rules for running and managing virtual internships.
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- 2021
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- Publication type:
- Editorial
Brain-inspired model for early vocal learning and correspondence matching using free-energy optimization.
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- PLoS Computational Biology, 2021, v. 17, n. 2, p. 1, doi. 10.1371/journal.pcbi.1008566
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- Article
Bayesian parameter estimation for automatic annotation of gene functions using observational data and phylogenetic trees.
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- PLoS Computational Biology, 2021, v. 17, n. 2, p. 1, doi. 10.1371/journal.pcbi.1007948
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Ten simple rules for navigating the computational aspect of an interdisciplinary PhD.
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- 2021
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- Publication type:
- Editorial
Spec2Vec: Improved mass spectral similarity scoring through learning of structural relationships.
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- PLoS Computational Biology, 2021, v. 17, n. 2, p. 1, doi. 10.1371/journal.pcbi.1008724
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- Article
On the importance of evolving phenotype distributions on evolutionary diversification.
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- PLoS Computational Biology, 2021, v. 17, n. 2, p. 1, doi. 10.1371/journal.pcbi.1008733
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- Article
Arrhythmogenic effects of ultra-long and bistable cardiac action potentials.
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- PLoS Computational Biology, 2021, v. 17, n. 2, p. 1, doi. 10.1371/journal.pcbi.1008683
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- Article
Estimating the extrinsic incubation period of malaria using a mechanistic model of sporogony.
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- PLoS Computational Biology, 2021, v. 17, n. 2, p. 1, doi. 10.1371/journal.pcbi.1008658
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A model of developmental canalization, applied to human cranial form.
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- PLoS Computational Biology, 2021, v. 17, n. 2, p. 1, doi. 10.1371/journal.pcbi.1008381
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Computational prediction of drug response in short QT syndrome type 1 based on measurements of compound effect in stem cell-derived cardiomyocytes.
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- PLoS Computational Biology, 2021, v. 17, n. 2, p. 1, doi. 10.1371/journal.pcbi.1008089
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- Article
The intrinsically disordered N-terminus of the voltage-dependent anion channel.
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- PLoS Computational Biology, 2021, v. 17, n. 2, p. 1, doi. 10.1371/journal.pcbi.1008750
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From heterogeneous healthcare data to disease-specific biomarker networks: A hierarchical Bayesian network approach.
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- PLoS Computational Biology, 2021, v. 17, n. 2, p. 1, doi. 10.1371/journal.pcbi.1008735
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- Article
OpenAWSEM with Open3SPN2: A fast, flexible, and accessible framework for large-scale coarse-grained biomolecular simulations.
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- PLoS Computational Biology, 2021, v. 17, n. 2, p. 1, doi. 10.1371/journal.pcbi.1008308
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TranSynergy: Mechanism-driven interpretable deep neural network for the synergistic prediction and pathway deconvolution of drug combinations.
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- PLoS Computational Biology, 2021, v. 17, n. 2, p. 1, doi. 10.1371/journal.pcbi.1008653
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- Article
Evaluating epidemic forecasts in an interval format.
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- PLoS Computational Biology, 2021, v. 17, n. 2, p. 1, doi. 10.1371/journal.pcbi.1008618
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- Article
The impact of phenotypic heterogeneity of tumour cells on treatment and relapse dynamics.
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- PLoS Computational Biology, 2021, v. 17, n. 2, p. 1, doi. 10.1371/journal.pcbi.1008702
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- Article
Investigating the representation of uncertainty in neuronal circuits.
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- PLoS Computational Biology, 2021, v. 17, n. 2, p. 1, doi. 10.1371/journal.pcbi.1008138
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- Article