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A novel machine learning based approach for iPS progenitor cell identification.
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- PLoS Computational Biology, 2019, v. 15, n. 12, p. N.PAG, doi. 10.1371/journal.pcbi.1007351
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Functional analysis of Rossmann-like domains reveals convergent evolution of topology and reaction pathways.
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- PLoS Computational Biology, 2019, v. 15, n. 12, p. N.PAG, doi. 10.1371/journal.pcbi.1007569
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Neuronal population model of globular bushy cells covering unit-to-unit variability.
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- PLoS Computational Biology, 2019, v. 15, n. 12, p. N.PAG, doi. 10.1371/journal.pcbi.1007563
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Fine-scale family structure shapes influenza transmission risk in households: Insights from primary schools in Matsumoto city, 2014/15.
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- PLoS Computational Biology, 2019, v. 15, n. 12, p. N.PAG, doi. 10.1371/journal.pcbi.1007589
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Associating lncRNAs with small molecules via bilevel optimization reveals cancer-related lncRNAs.
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- PLoS Computational Biology, 2019, v. 15, n. 12, p. N.PAG, doi. 10.1371/journal.pcbi.1007540
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Protons in small spaces: Discrete simulations of vesicle acidification.
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- PLoS Computational Biology, 2019, v. 15, n. 12, p. N.PAG, doi. 10.1371/journal.pcbi.1007539
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Overlap matrix completion for predicting drug-associated indications.
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- PLoS Computational Biology, 2019, v. 15, n. 12, p. N.PAG, doi. 10.1371/journal.pcbi.1007541
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Stochasticity of replication forks' speeds plays a key role in the dynamics of DNA replication.
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- PLoS Computational Biology, 2019, v. 15, n. 12, p. N.PAG, doi. 10.1371/journal.pcbi.1007519
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Interkinetic nuclear movements promote apical expansion in pseudostratified epithelia at the expense of apicobasal elongation.
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- PLoS Computational Biology, 2019, v. 15, n. 12, p. N.PAG, doi. 10.1371/journal.pcbi.1007171
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Evidence for a multi-level trophic organization of the human gut microbiome.
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- PLoS Computational Biology, 2019, v. 15, n. 12, p. N.PAG, doi. 10.1371/journal.pcbi.1007524
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Motion prediction enables simulated MR-imaging of freely moving model organisms.
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- PLoS Computational Biology, 2019, v. 15, n. 12, p. N.PAG, doi. 10.1371/journal.pcbi.1006997
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Nine quick tips for analyzing network data.
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- PLoS Computational Biology, 2019, v. 15, n. 12, p. N.PAG, doi. 10.1371/journal.pcbi.1007434
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NUFEB: A massively parallel simulator for individual-based modelling of microbial communities.
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- PLoS Computational Biology, 2019, v. 15, n. 12, p. 1, doi. 10.1371/journal.pcbi.1007125
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Systems-level analysis of NalD mutation, a recurrent driver of rapid drug resistance in acute Pseudomonas aeruginosa infection.
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- PLoS Computational Biology, 2019, v. 15, n. 12, p. N.PAG, doi. 10.1371/journal.pcbi.1007562
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A Multi-State Model of the CaMKII Dodecamer Suggests a Role for Calmodulin in Maintenance of Autophosphorylation.
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- PLoS Computational Biology, 2019, v. 15, n. 12, p. N.PAG, doi. 10.1371/journal.pcbi.1006941
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Regulatory context drives conservation of glycine riboswitch aptamers.
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- PLoS Computational Biology, 2019, v. 15, n. 12, p. N.PAG, doi. 10.1371/journal.pcbi.1007564
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Benchmarking network algorithms for contextualizing genes of interest.
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- PLoS Computational Biology, 2019, v. 15, n. 12, p. N.PAG, doi. 10.1371/journal.pcbi.1007403
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The dynamics of motor learning through the formation of internal models.
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- PLoS Computational Biology, 2019, v. 15, n. 12, p. N.PAG, doi. 10.1371/journal.pcbi.1007118
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Representation learning of genomic sequence motifs with convolutional neural networks.
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- PLoS Computational Biology, 2019, v. 15, n. 12, p. N.PAG, doi. 10.1371/journal.pcbi.1007560
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Avoidance of non-localizable obstacles in echolocating bats: A robotic model.
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- PLoS Computational Biology, 2019, v. 15, n. 12, p. N.PAG, doi. 10.1371/journal.pcbi.1007550
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Chemotaxis in external fields: Simulations for active magnetic biological matter.
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- PLoS Computational Biology, 2019, v. 15, n. 12, p. N.PAG, doi. 10.1371/journal.pcbi.1007548
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Establishment of computational biology in Greece and Cyprus: Past, present, and future.
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- PLoS Computational Biology, 2019, v. 15, n. 12, p. N.PAG, doi. 10.1371/journal.pcbi.1007532
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Incomplete information about the partner affects the development of collaborative strategies in joint action.
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- PLoS Computational Biology, 2019, v. 15, n. 12, p. 1, doi. 10.1371/journal.pcbi.1006385
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Large benefits to youth-focused HIV treatment-as-prevention efforts in generalized heterosexual populations: An agent-based simulation model.
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- PLoS Computational Biology, 2019, v. 15, n. 12, p. 1, doi. 10.1371/journal.pcbi.1007561
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ForestQC: Quality control on genetic variants from next-generation sequencing data using random forest.
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- PLoS Computational Biology, 2019, v. 15, n. 12, p. 1, doi. 10.1371/journal.pcbi.1007556
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Probing neural networks for dynamic switches of communication pathways.
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- PLoS Computational Biology, 2019, v. 15, n. 12, p. 1, doi. 10.1371/journal.pcbi.1007551
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Revisiting the "satisfaction of spatial restraints" approach of MODELLER for protein homology modeling.
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- PLoS Computational Biology, 2019, v. 15, n. 12, p. 1, doi. 10.1371/journal.pcbi.1007219
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Estimation of temporal covariances in pathogen dynamics using Bayesian multivariate autoregressive models.
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- PLoS Computational Biology, 2019, v. 15, n. 12, p. 1, doi. 10.1371/journal.pcbi.1007492
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Molecular sampling at logarithmic rates for next-generation sequencing.
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- PLoS Computational Biology, 2019, v. 15, n. 12, p. 1, doi. 10.1371/journal.pcbi.1007537
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From energy to cellular forces in the Cellular Potts Model: An algorithmic approach.
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- PLoS Computational Biology, 2019, v. 15, n. 12, p. 1, doi. 10.1371/journal.pcbi.1007459
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Automated minute scale RNA-seq of pluripotent stem cell differentiation reveals early divergence of human and mouse gene expression kinetics.
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- PLoS Computational Biology, 2019, v. 15, n. 12, p. 1, doi. 10.1371/journal.pcbi.1007543
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Statistical inference in ensemble modeling of cellular metabolism.
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- PLoS Computational Biology, 2019, v. 15, n. 12, p. 1, doi. 10.1371/journal.pcbi.1007536
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The benefits of insect-swarm hunting to echolocating bats, and its influence on the evolution of bat echolocation signals.
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- PLoS Computational Biology, 2019, v. 15, n. 12, p. 1, doi. 10.1371/journal.pcbi.1006873
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Computational pan-genome mapping and pairwise SNP-distance improve detection of Mycobacterium tuberculosis transmission clusters.
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- PLoS Computational Biology, 2019, v. 15, n. 12, p. 1, doi. 10.1371/journal.pcbi.1007527
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Alterations of the interactome of Bcl-2 proteins in breast cancer at the transcriptional, mutational and structural level.
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- PLoS Computational Biology, 2019, v. 15, n. 12, p. 1, doi. 10.1371/journal.pcbi.1007485
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Stability of spontaneous, correlated activity in mouse auditory cortex.
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- PLoS Computational Biology, 2019, v. 15, n. 12, p. 1, doi. 10.1371/journal.pcbi.1007360
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Inferring reaction network structure from single-cell, multiplex data, using toric systems theory.
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- PLoS Computational Biology, 2019, v. 15, n. 12, p. 1, doi. 10.1371/journal.pcbi.1007311
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A cell-based probabilistic approach unveils the concerted action of miRNAs.
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- PLoS Computational Biology, 2019, v. 15, n. 12, p. 1, doi. 10.1371/journal.pcbi.1007204
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Autistic traits influence the strategic diversity of information sampling: Insights from two-stage decision models.
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- PLoS Computational Biology, 2019, v. 15, n. 12, p. 1, doi. 10.1371/journal.pcbi.1006964
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Genome-scale model of metabolism and gene expression provides a multi-scale description of acid stress responses in Escherichia coli.
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- PLoS Computational Biology, 2019, v. 15, n. 12, p. 1, doi. 10.1371/journal.pcbi.1007525
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CDSeq: A novel complete deconvolution method for dissecting heterogeneous samples using gene expression data.
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- PLoS Computational Biology, 2019, v. 15, n. 12, p. 1, doi. 10.1371/journal.pcbi.1007510
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A computational study on the role of glutamate and NMDA receptors on cortical spreading depression using a multidomain electrodiffusion model.
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- PLoS Computational Biology, 2019, v. 15, n. 12, p. 1, doi. 10.1371/journal.pcbi.1007455
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The effect of inhibition on rate code efficiency indicators.
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- PLoS Computational Biology, 2019, v. 15, n. 12, p. 1, doi. 10.1371/journal.pcbi.1007545
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CBNA: A control theory based method for identifying coding and non-coding cancer drivers.
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- PLoS Computational Biology, 2019, v. 15, n. 12, p. 1, doi. 10.1371/journal.pcbi.1007538
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Statistics of correlated percolation in a bacterial community.
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- PLoS Computational Biology, 2019, v. 15, n. 12, p. 1, doi. 10.1371/journal.pcbi.1007508
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