Works matching IS 14747596 AND DT 2023

Results: 289

Metabolic GWAS-based dissection of genetic basis underlying nutrient quality variation and domestication of cassava storage root.

Published in:

Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-023-03137-y

By:

Ding, Zehong;
Fu, Lili;
Wang, Bin;
Ye, Jianqiu;
Ou, Wenjun;
Yan, Yan;
Li, Meiying;
Zeng, Liwang;
Dong, Xuekui;
Tie, Weiwei;
Ye, Xiaoxue;
Yang, Jinghao;
Xie, Zhengnan;
Wang, Yu;
Guo, Jianchun;
Chen, Songbi;
Xiao, Xinhui;
Wan, Zhongqing;
An, Feifei;
Zhang, Jiaming

Publication type:

Article

Challenges and opportunities to computationally deconvolve heterogeneous tissue with varying cell sizes using single-cell RNA-sequencing datasets.

Published in:

Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-023-03123-4

By:

Maden, Sean K.;
Kwon, Sang Ho;
Huuki-Myers, Louise A.;
Collado-Torres, Leonardo;
Hicks, Stephanie C.;
Maynard, Kristen R.

Publication type:

Article

A time-resolved meta-analysis of consensus gene expression profiles during human T-cell activation.

Published in:

Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-023-03120-7

By:

Rade, Michael;
Böhlen, Sebastian;
Neuhaus, Vanessa;
Löffler, Dennis;
Blumert, Conny;
Merz, Maximilian;
Köhl, Ulrike;
Dehmel, Susann;
Sewald, Katherina;
Reiche, Kristin

Publication type:

Article

SQANTI-SIM: a simulator of controlled transcript novelty for lrRNA-seq benchmark.

Published in:

Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-023-03127-0

By:

Mestre-Tomás, Jorge;
Liu, Tianyuan;
Pardo-Palacios, Francisco;
Conesa, Ana

Publication type:

Article

Comparing methods for constructing and representing human pangenome graphs.

Published in:

Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-023-03098-2

By:

Andreace, Francesco;
Lechat, Pierre;
Dufresne, Yoann;
Chikhi, Rayan

Publication type:

Article

Benchmarking splice variant prediction algorithms using massively parallel splicing assays.

Published in:

Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-023-03144-z

By:

Smith, Cathy;
Kitzman, Jacob O.

Publication type:

Article

ENGEP: advancing spatial transcriptomics with accurate unmeasured gene expression prediction.

Published in:

Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-023-03139-w

By:

Yang, Shi-Tong;
Zhang, Xiao-Fei

Publication type:

Article

A super-pangenome of the North American wild grape species.

Published in:

Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-023-03133-2

By:

Cochetel, Noé;
Minio, Andrea;
Guarracino, Andrea;
Garcia, Jadran F.;
Figueroa-Balderas, Rosa;
Massonnet, Mélanie;
Kasuga, Takao;
Londo, Jason P.;
Garrison, Erik;
Gaut, Brandon S.;
Cantu, Dario

Publication type:

Article

Smoother: a unified and modular framework for incorporating structural dependency in spatial omics data.

Published in:

Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-023-03138-x

By:

Su, Jiayu;
Reynier, Jean-Baptiste;
Fu, Xi;
Zhong, Guojie;
Jiang, Jiahao;
Escalante, Rydberg Supo;
Wang, Yiping;
Aparicio, Luis;
Izar, Benjamin;
Knowles, David A.;
Rabadan, Raul

Publication type:

Article

A super-pangenome of the North American wild grape species.

Published in:

Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-023-03133-2

By:

Cochetel, Noé;
Minio, Andrea;
Guarracino, Andrea;
Garcia, Jadran F.;
Figueroa-Balderas, Rosa;
Massonnet, Mélanie;
Kasuga, Takao;
Londo, Jason P.;
Garrison, Erik;
Gaut, Brandon S.;
Cantu, Dario

Publication type:

Article

scNAT: a deep learning method for integrating paired single-cell RNA and T cell receptor sequencing profiles.

Published in:

Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-023-03129-y

By:

Zhu, Biqing;
Wang, Yuge;
Ku, Li-Ting;
van Dijk, David;
Zhang, Le;
Hafler, David A.;
Zhao, Hongyu

Publication type:

Article

Turnover of strain-level diversity modulates functional traits in the honeybee gut microbiome between nurses and foragers.

Published in:

Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-023-03131-4

By:

Baud, Gilles L. C.;
Prasad, Aiswarya;
Ellegaard, Kirsten M.;
Engel, Philipp

Publication type:

Article

Cotton pedigree genome reveals restriction of cultivar-driven strategy in cotton breeding.

Published in:

Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-023-03124-3

By:

Liu, Shang;
Zuo, Dongyun;
Cheng, Hailiang;
He, Man;
Wang, Qiaolian;
Lv, Limin;
Zhang, Youping;
Ashraf, Javaria;
Liu, Ji;
Song, Guoli

Publication type:

Article

Pediatric glioma histone H3.3 K27M/G34R mutations drive abnormalities in PML nuclear bodies.

Published in:

Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-023-03122-5

By:

Voon, Hsiao P. J.;
Hii, Linda;
Garvie, Andrew;
Udugama, Maheshi;
Krug, Brian;
Russo, Caterina;
Chüeh, Anderly C.;
Daly, Roger J.;
Morey, Alison;
Bell, Toby D. M.;
Turner, Stephen J.;
Rosenbluh, Joseph;
Daniel, Paul;
Firestein, Ron;
Mann, Jeffrey R.;
Collas, Philippe;
Jabado, Nada;
Wong, Lee H.

Publication type:

Article

GCLiPP: global crosslinking and protein purification method for constructing high-resolution occupancy maps for RNA binding proteins.

Published in:

Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-023-03125-2

By:

Zhu, Wandi S.;
Litterman, Adam J.;
Sekhon, Harshaan S.;
Kageyama, Robin;
Arce, Maya M.;
Taylor, Kimberly E.;
Zhao, Wenxue;
Criswell, Lindsey A.;
Zaitlen, Noah;
Erle, David J.;
Ansel, K. Mark

Publication type:

Article

ConDoR: tumor phylogeny inference with a copy-number constrained mutation loss model.

Published in:

Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-023-03106-5

By:

Sashittal, Palash;
Zhang, Haochen;
Iacobuzio-Donahue, Christine A.;
Raphael, Benjamin J.

Publication type:

Article

DNA methylation modulated genetic variant effect on gene transcriptional regulation.

Published in:

Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-023-03130-5

By:

Zeng, Yong;
Jain, Rahi;
Lam, Magnus;
Ahmed, Musaddeque;
Guo, Haiyang;
Xu, Wenjie;
Zhong, Yuan;
Wei, Gong-Hong;
Xu, Wei;
He, Housheng Hansen

Publication type:

Article

Reconstruction of private genomes through reference-based genotype imputation.

Published in:

Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-023-03105-6

By:

Mosca, Matthew J.;
Cho, Hyunghoon

Publication type:

Article

TargetRNA3: predicting prokaryotic RNA regulatory targets with machine learning.

Published in:

Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-023-03117-2

By:

Tjaden, Brian

Publication type:

Article

Hybrid-hybrid correction of errors in long reads with HERO.

Published in:

Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-023-03112-7

By:

Kang, Xiongbin;
Xu, Jialu;
Luo, Xiao;
Schönhuth, Alexander

Publication type:

Article

STmut: a framework for visualizing somatic alterations in spatial transcriptomics data of cancer.

Published in:

Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-023-03121-6

By:

Chen, Limin;
Chang, Darwin;
Tandukar, Bishal;
Deivendran, Delahny;
Pozniak, Joanna;
Cruz-Pacheco, Noel;
Cho, Raymond J.;
Cheng, Jeffrey;
Yeh, Iwei;
Marine, Chris;
Bastian, Boris C.;
Ji, Andrew L.;
Shain, A. Hunter

Publication type:

Article

A large-scale genomically predicted protein mass database enables rapid and broad-spectrum identification of bacterial and archaeal isolates by mass spectrometry.

Published in:

Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-023-03096-4

By:

Sekiguchi, Yuji;
Teramoto, Kanae;
Tourlousse, Dieter M.;
Ohashi, Akiko;
Hamajima, Mayu;
Miura, Daisuke;
Yamada, Yoshihiro;
Iwamoto, Shinichi;
Tanaka, Koichi

Publication type:

Article

Haplotype-resolved assemblies and variant benchmark of a Chinese Quartet.

Published in:

Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-023-03116-3

By:

Jia, Peng;
Dong, Lianhua;
Yang, Xiaofei;
Wang, Bo;
Bush, Stephen J.;
Wang, Tingjie;
Lin, Jiadong;
Wang, Songbo;
Zhao, Xixi;
Xu, Tun;
Che, Yizhuo;
Dang, Ningxin;
Ren, Luyao;
Zhang, Yujing;
Wang, Xia;
Liang, Fan;
Wang, Yang;
Ruan, Jue;
Xia, Han;
Zheng, Yuanting

Publication type:

Article

Methylation-directed regulatory networks determine enhancing and silencing of mutation disease driver genes and explain inter-patient expression variation.

Published in:

Genome Biology, 2023, p. 1, doi. 10.1186/s13059-023-03094-6

By:

Edrei, Yifat;
Levy, Revital;
Kaye, Daniel;
Marom, Anat;
Radlwimmer, Bernhard;
Hellman, Asaf

Publication type:

Article

Single-cell multiomics of the human retina reveals hierarchical transcription factor collaboration in mediating cell type-specific effects of genetic variants on gene regulation.

Published in:

Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-023-03111-8

By:

Wang, Jun;
Cheng, Xuesen;
Liang, Qingnan;
Owen, Leah A.;
Lu, Jiaxiong;
Zheng, Yiqiao;
Wang, Meng;
Chen, Shiming;
DeAngelis, Margaret M.;
Li, Yumei;
Chen, Rui

Publication type:

Article

Quartet DNA reference materials and datasets for comprehensively evaluating germline variant calling performance.

Published in:

Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-023-03109-2

By:

Ren, Luyao;
Duan, Xiaoke;
Dong, Lianhua;
Zhang, Rui;
Yang, Jingcheng;
Gao, Yuechen;
Peng, Rongxue;
Hou, Wanwan;
Liu, Yaqing;
Li, Jingjing;
Yu, Ying;
Zhang, Naixin;
Shang, Jun;
Liang, Fan;
Wang, Depeng;
Chen, Hui;
Sun, Lele;
Hao, Lingtong;
Scherer, Andreas;
Nordlund, Jessica

Publication type:

Article

Multi-omics analysis reveals the molecular response to heat stress in a "red tide" dinoflagellate.

Published in:

Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-023-03107-4

By:

Dougan, Katherine E.;
Deng, Zhi-Luo;
Wöhlbrand, Lars;
Reuse, Carsten;
Bunk, Boyke;
Chen, Yibi;
Hartlich, Juliane;
Hiller, Karsten;
John, Uwe;
Kalvelage, Jana;
Mansky, Johannes;
Neumann-Schaal, Meina;
Overmann, Jörg;
Petersen, Jörn;
Sanchez-Garcia, Selene;
Schmidt-Hohagen, Kerstin;
Shah, Sarah;
Spröer, Cathrin;
Sztajer, Helena;
Wang, Hui

Publication type:

Article

Acute expression of human APOBEC3B in mice results in RNA editing and lethality.

Published in:

Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-023-03115-4

By:

Alonso de la Vega, Alicia;
Temiz, Nuri Alpay;
Tasakis, Rafail;
Somogyi, Kalman;
Salgueiro, Lorena;
Zimmer, Eleni;
Ramos, Maria;
Diaz-Jimenez, Alberto;
Chocarro, Sara;
Fernández-Vaquero, Mirian;
Stefanovska, Bojana;
Reuveni, Eli;
Ben-David, Uri;
Stenzinger, Albrecht;
Poth, Tanja;
Heikenwälder, Mathias;
Papavasiliou, Nina;
Harris, Reuben S.;
Sotillo, Rocio

Publication type:

Article

Evaluation of deep learning-based feature selection for single-cell RNA sequencing data analysis.

Published in:

Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-023-03100-x

By:

Huang, Hao;
Liu, Chunlei;
Wagle, Manoj M.;
Yang, Pengyi

Publication type:

Article

Cooperation of MLL1 and Jun in controlling H3K4me3 on enhancers in colorectal cancer.

Published in:

Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-023-03108-3

By:

Lin, Xiang;
Chen, Ji-Dong;
Wang, Chen-Yu;
Cai, Zhen;
Zhan, Rui;
Yang, Chen;
Zhang, La-Ying;
Li, Lian-Yun;
Xiao, Yong;
Chen, Ming-Kai;
Wu, Min

Publication type:

Article

CREaTor: zero-shot cis-regulatory pattern modeling with attention mechanisms.

Published in:

Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-023-03103-8

By:

Li, Yongge;
Ju, Fusong;
Chen, Zhiyuan;
Qu, Yiming;
Xia, Huanhuan;
He, Liang;
Wu, Lijun;
Zhu, Jianwei;
Shao, Bin;
Deng, Pan

Publication type:

Article

Dissecting the autism-associated 16p11.2 locus identifies multiple drivers in neuroanatomical phenotypes and unveils a male-specific role for the major vault protein.

Published in:

Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-023-03092-8

By:

Kretz, Perrine F.;
Wagner, Christel;
Mikhaleva, Anna;
Montillot, Charlotte;
Hugel, Sylvain;
Morella, Ilaria;
Kannan, Meghna;
Fischer, Marie-Christine;
Milhau, Maxence;
Yalcin, Ipek;
Brambilla, Riccardo;
Selloum, Mohammed;
Herault, Yann;
Reymond, Alexandre;
Collins, Stephan C.;
Yalcin, Binnaz

Publication type:

Article

N-of-one differential gene expression without control samples using a deep generative model.

Published in:

Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-023-03104-7

By:

Prada-Luengo, Iñigo;
Schuster, Viktoria;
Liang, Yuhu;
Terkelsen, Thilde;
Sora, Valentina;
Krogh, Anders

Publication type:

Article

Cytomulate: accurate and efficient simulation of CyTOF data.

Published in:

Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-023-03099-1

By:

Yang, Yuqiu;
Wang, Kaiwen;
Lu, Zeyu;
Wang, Tao;
Wang, Xinlei

Publication type:

Article

Fake IDs? Widespread misannotation of DNA transposons as a general transcription factor.

Published in:

Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-023-03102-9

By:

Hassan, Nozhat T.;
Adelson, David L.

Publication type:

Article

Large sample size and nonlinear sparse models outline epistatic effects in inflammatory bowel disease.

Published in:

Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-023-03064-y

By:

Verplaetse, Nora;
Passemiers, Antoine;
Arany, Adam;
Moreau, Yves;
Raimondi, Daniele

Publication type:

Article

Genomic variant benchmark: if you cannot measure it, you cannot improve it.

Published in:

Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-023-03061-1

By:

Majidian, Sina;
Agustinho, Daniel Paiva;
Chin, Chen-Shan;
Sedlazeck, Fritz J.;
Mahmoud, Medhat

Publication type:

Article

Statistical learning quantifies transposable element-mediated cis-regulation.

Published in:

Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-023-03085-7

By:

Pulver, Cyril;
Grun, Delphine;
Duc, Julien;
Sheppard, Shaoline;
Planet, Evarist;
Coudray, Alexandre;
de Fondeville, Raphaël;
Pontis, Julien;
Trono, Didier

Publication type:

Article

Author Correction: Genome sequencing of 2000 canids by the Dog10K consortium advances the understanding of demography, genome function and architecture.

Published in:

2023

By:

Meadows, Jennifer R. S.;
Kidd, Jefrey M.;
Wang, Guo-Dong;
Parker, Heidi G.;
Schall, Peter Z.;
Bianchi, Matteo;
Christmas, Matthew J.;
Bougiouri, Katia;
Buckley, Reuben M.;
Hitte, Christophe;
Nguyen, Anthony K.;
Wang, Chao;
Jagannathan, Vidhya;
Niskanen, Julia E.;
Frantz, Laurent A. F.;
Arumilli, Meharji;
Hundi, Sruthi;
Lindblad-Toh, Kerstin;
Ginja, Catarina;
Agustina, Kadek Karang

Publication type:

Correction Notice

Phytochromes transmit photoperiod information via the evening complex in Brachypodium.

Published in:

Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-023-03082-w

By:

Gao, Mingjun;
Lu, Yunlong;
Geng, Feng;
Klose, Cornelia;
Staudt, Anne-Marie;
Huang, He;
Nguyen, Duy;
Lan, Hui;
Lu, Han;
Mockler, Todd C.;
Nusinow, Dmitri A.;
Hiltbrunner, Andreas;
Schäfer, Eberhard;
Wigge, Philip A.;
Jaeger, Katja E.

Publication type:

Article

A genome catalog of the early-life human skin microbiome.

Published in:

Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-023-03090-w

By:

Shen, Zeyang;
Robert, Lukian;
Stolpman, Milan;
Che, You;
Allen, Katrina J.;
Saffery, Richard;
Walsh, Audrey;
Young, Angela;
Eckert, Jana;
Deming, Clay;
Chen, Qiong;
Conlan, Sean;
Laky, Karen;
Li, Jenny Min;
Chatman, Lindsay;
Kashaf, Sara Saheb;
Barnabas, Beatrice B.;
Black, Sean;
Bouffard, Gerard G.;
Brooks, Shelise Y.

Publication type:

Article

Genome sequencing of 2000 canids by the Dog10K consortium advances the understanding of demography, genome function and architecture.

Published in:

Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-023-03023-7

By:

Meadows, Jennifer R. S.;
Kidd, Jeffrey M.;
Wang, Guo-Dong;
Parker, Heidi G.;
Schall, Peter Z.;
Bianchi, Matteo;
Christmas, Matthew J.;
Bougiouri, Katia;
Buckley, Reuben M.;
Hitte, Christophe;
Nguyen, Anthony K.;
Wang, Chao;
Jagannathan, Vidhya;
Niskanen, Julia E.;
Frantz, Laurent A. F.;
Arumilli, Meharji;
Hundi, Sruthi;
Lindblad-Toh, Kerstin;
Ginja, Catarina;
Agustina, Kadek Karang

Publication type:

Article

Quantification of evolved DNA-editing enzymes at scale with DEQSeq.

Published in:

Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-023-03097-3

By:

Schmitt, Lukas Theo;
Schneider, Aksana;
Posorski, Jonas;
Lansing, Felix;
Jelicic, Milica;
Jain, Manavi;
Sayed, Shady;
Buchholz, Frank;
Sürün, Duran

Publication type:

Article

The chromatin landscape of the euryarchaeon Haloferax volcanii.

Published in:

Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-023-03095-5

By:

Marinov, Georgi K.;
Bagdatli, S. Tansu;
Wu, Tong;
He, Chuan;
Kundaje, Anshul;
Greenleaf, William J.

Publication type:

Article

Comparison of gene clustering criteria reveals intrinsic uncertainty in pangenome analyses.

Published in:

Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-023-03089-3

By:

Manzano-Morales, Saioa;
Liu, Yang;
González-Bodí, Sara;
Huerta-Cepas, Jaime;
Iranzo, Jaime

Publication type:

Article

In-organoid single-cell CRISPR screening reveals determinants of hepatocyte differentiation and maturation.

Published in:

Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-023-03084-8

By:

Liang, Junbo;
Wei, Jinsong;
Cao, Jun;
Qian, Jun;
Gao, Ran;
Li, Xiaoyu;
Wang, Dingding;
Gu, Yani;
Dong, Lei;
Yu, Jia;
Zhao, Bing;
Wang, Xiaoyue

Publication type:

Article

CHESS 3: an improved, comprehensive catalog of human genes and transcripts based on large-scale expression data, phylogenetic analysis, and protein structure.

Published in:

Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-023-03088-4

By:

Varabyou, Ales;
Sommer, Markus J.;
Erdogdu, Beril;
Shinder, Ida;
Minkin, Ilia;
Chao, Kuan-Hao;
Park, Sukhwan;
Heinz, Jakob;
Pockrandt, Christopher;
Shumate, Alaina;
Rincon, Natalia;
Puiu, Daniela;
Steinegger, Martin;
Salzberg, Steven L.;
Pertea, Mihaela

Publication type:

Article

Landscape of enhancer disruption and functional screen in melanoma cells.

Published in:

Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-023-03087-5

By:

Wang, Zhao;
Luo, Menghan;
Liang, Qian;
Zhao, Ke;
Hu, Yuelin;
Wang, Wei;
Feng, Xiangling;
Hu, Bolang;
Teng, Jianjin;
You, Tianyi;
Li, Ran;
Bao, Zhengkai;
Pan, Wenhao;
Yang, Tielong;
Zhang, Chao;
Li, Ting;
Dong, Xiaobao;
Yi, Xianfu;
Liu, Ben;
Zhao, Li

Publication type:

Article

MGA-seq: robust identification of extrachromosomal DNA and genetic variants using multiple genetic abnormality sequencing.

Published in:

Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-023-03081-x

By:

Lin, Da;
Zou, Yanyan;
Li, Xinyu;
Wang, Jinyue;
Xiao, Qin;
Gao, Xiaochen;
Lin, Fei;
Zhang, Ningyuan;
Jiao, Ming;
Guo, Yu;
Teng, Zhaowei;
Li, Shiyi;
Wei, Yongchang;
Zhou, Fuling;
Yin, Rong;
Zhang, Siheng;
Xing, Lingyu;
Xu, Weize;
Wu, Xiaofeng;
Yang, Bing

Publication type:

Article

aMeta: an accurate and memory-efficient ancient metagenomic profiling workflow.

Published in:

Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-023-03083-9

By:

Pochon, Zoé;
Bergfeldt, Nora;
Kırdök, Emrah;
Vicente, Mário;
Naidoo, Thijessen;
van der Valk, Tom;
Altınışık, N. Ezgi;
Krzewińska, Maja;
Dalén, Love;
Götherström, Anders;
Mirabello, Claudio;
Unneberg, Per;
Oskolkov, Nikolay

Publication type:

Article