Works matching IS 14747596 AND DT 2014 AND VI 15 AND IP 10

Results: 40

Drug resistance genomics of the antimalarial drug artemisinin.
Published in:
Genome Biology, 2014, v. 15, n. 10, p. 544, doi. 10.1186/s13059-014-0544-6
By:
- Winzeler, Elizabeth A.;
- Manary, Micah J.
Publication type:
Article
Genome-wide RIP-Chip analysis of translational repressor-bound mRNAs in the Plasmodium gametocyte.
Published in:
Genome Biology, 2014, v. 15, n. 10, p. 493, doi. 10.1186/s13059-014-0493-0
By:
- Guerreiro, Ana;
- Deligianni, Elena;
- Santos, Jorge M.;
- Silva, Patricia A. G. C.;
- Louis, Christos;
- Pain, Arnab;
- Janse, Chris J.;
- Franke-Fayard, Blandine;
- Carret, Celine K.;
- Siden-Kiamos, Inga;
- Mair, Gunnar R.
Publication type:
Article
Evolution of extensively drug-resistant Mycobacterium tuberculosis from a susceptible ancestor in a single patient.
Published in:
Genome Biology, 2014, v. 15, n. 10, p. 490, doi. 10.1186/s13059-014-0490-3
By:
- Eldholm, Vegard;
- Norheim, Gunnstein;
- von der Lippe, Bent;
- Kinander, Wibeke;
- Dahle, Ulf R.;
- Caugant, Dominique A.;
- Mannsåker, Turid;
- Torunn Mengshoel, Anne;
- Dyrhol-Riise, Anne Ma;
- Balloux, Francois
Publication type:
Article
Whole genome sequencing of SIV-infected macaques identifies candidate loci that may contribute to host control of virus replication.
Published in:
Genome Biology, 2014, v. 15, n. 10, p. 478, doi. 10.1186/s13059-014-0478-z
By:
- Ericsen, Adam J.;
- Starrett, Gabriel J.;
- Greene, Justin M.;
- Lauck, Michael;
- Raveendran, Muthuswamy;
- Rio Deiros, David;
- Mohns, Mariel S.;
- Vince, Nicolas;
- Cain, Brian T.;
- Pham, Ngoc H.;
- Weinfurter, Jason T.;
- Bailey, Adam L.;
- Budde, Melisa L.;
- Wiseman, Roger W.;
- Gibbs, Richard;
- Muzny, Donna;
- Friedrich, Thomas C.;
- Rogers, Jeffrey;
- O’Connor, David H.
Publication type:
Article
Human infectious diseases in the genomics era: where do we go from here?
Published in:
Genome Biology, 2014, v. 15, n. 10, p. 529, doi. 10.1186/s13059-014-0529-5
By:
- Bains, Ripudaman K.
Publication type:
Article
Next-generation pathogen genomics.
Published in:
Genome Biology, 2014, v. 15, n. 10, p. 528, doi. 10.1186/s13059-014-0528-6
By:
- Weinstock, George M.;
- Peacock, Sharon J.
Publication type:
Article
Empowering African genomics for infectious disease control.
Published in:
Genome Biology, 2014, v. 15, n. 10, p. 515, doi. 10.1186/s13059-014-0515-y
By:
- Folarin1,2, Onikepe A.;
- Happi3, Anise N.;
- Happi1,2, Christian T.
Publication type:
Article
Erratum: The RNA editing enzyme APOBEC1 induces somatic mutations and a compatible mutational signature is present in esophageal adenocarcinomas.
Published in:
Genome Biology, 2014, v. 15, n. 10, p. 497, doi. 10.1186/s13059-014-0497-9
By:
- Saraconi, Giulia;
- Severi, Francesco;
- Sala, Cesare;
- Mattiuz, Giorgio;
- Conticello, Silvestro G.
Publication type:
Article
Proteomics informed by transcriptomics reveals Hendra virus sensitizes bat cells to TRAIL-mediated apoptosis.
Published in:
Genome Biology, 2014, v. 15, n. 10, p. 532, doi. 10.1186/s13059-014-0532-x
By:
- Wynne, James W.;
- Shiell, Brian J.;
- Marsh, Glenn A.;
- Boyd, Victoria;
- Harper, Jennifer A.;
- Heesom, Kate;
- Monaghan, Paul;
- Peng Zhou;
- Payne, Jean;
- Klein, Reuben;
- Todd, Shawn;
- Mok, Lawrence;
- Green, Diane;
- Bingham, John;
- Tachedjian, Mary;
- Baker, Michelle L.;
- Matthews, David;
- Lin-Fa Wang
Publication type:
Article
Elucidating variations in the nucleotide sequence of Ebola virus associated with increasing pathogenicity.
Published in:
Genome Biology, 2014, v. 15, n. 10, p. 540, doi. 10.1186/s13059-014-0540-x
By:
- Dowall, Stuart D.;
- Matthews, David A.;
- García-Dorival, Isabel;
- Taylor, Irene;
- Kenny, John;
- Hertz-Fowler, Christiane;
- Hall, Neil;
- Corbin-Lickfett, Kara;
- Empig, Cyril;
- Schlunegger, Kyle;
- Barr, John N.;
- Carroll, Miles W.;
- Hewson, Roger;
- Hiscox, Julian A.
Publication type:
Article
The Harvest suite for rapid core-genome alignment and visualization of thousands of intraspecific microbial genomes.
Published in:
Genome Biology, 2014, v. 15, n. 10, p. 524, doi. 10.1186/s13059-014-0524-x
By:
- Treangen, Todd J.;
- Ondov, Brian D.;
- Koren, Sergey;
- Phillippy, Adam M.
Publication type:
Article
Translating genomics research into control of tuberculosis: lessons learned and future prospects.
Published in:
Genome Biology, 2014, v. 15, n. 10, p. 514, doi. 10.1186/s13059-014-0514-z
By:
- Warner, Digby F.;
- Mizrahi, Valerie
Publication type:
Article
BAsE-Seq: a method for obtaining long viral haplotypes from short sequence reads.
Published in:
Genome Biology, 2014, v. 15, n. 10, p. 517, doi. 10.1186/s13059-014-0517-9
By:
- Hong, Lewis Z.;
- Shuzhen Hong;
- Han Teng Wong;
- Aw, Pauline P. K.;
- Yan Cheng;
- Wilm, Andreas;
- de Sessions, Paola F.;
- Seng Gee Lim;
- Nagarajan, Niranjan;
- Hibberd, Martin L.;
- Quake, Stephen R.;
- Burkholder, William F.
Publication type:
Article
Enhanced methods for unbiased deep sequencing of Lassa and Ebola RNA viruses from clinical and biological samples.
Published in:
Genome Biology, 2014, v. 15, n. 10, p. 519, doi. 10.1186/s13059-014-0519-7
By:
- Matranga, Christian B.;
- Andersen, Kristian G.;
- Winnicki, Sarah;
- Busby, Michele;
- Gladden, Adrianne D.;
- Tewhey, Ryan;
- Stremlau, Matthew;
- Berlin, Aaron;
- Gire, Stephen K.;
- England, Eleina;
- Moses, Lina M.;
- Mikkelsen, Tarjei S.;
- Odia, Ikponmwonsa;
- Ehiane, Philomena E.;
- Folarin, Onikepe;
- Goba, Augustine;
- Grant, Donald S.;
- Honko, Anna;
- Hensley, Lisa;
- Happi, Christian
Publication type:
Article
The genome of the sparganosis tapeworm Spirometra erinaceieuropaei isolated from the biopsy of a migrating brain lesion.
Published in:
Genome Biology, 2014, v. 15, n. 10, p. 510, doi. 10.1186/s13059-014-0510-3
By:
- Bennett, Hayley M.;
- Hoi Ping Mok;
- Gkrania-Klotsas, Effrossyni;
- Isheng J Tsai;
- Stanley, Eleanor J.;
- Antoun, Nagui M.;
- Coghlan, Avril;
- Harsha, Bhavana;
- Traini, Alessandra;
- Ribeiro, Diogo M.;
- Steinbiss, Sascha;
- Lucas, Sebastian B.;
- Allinson, Kieren S. J.;
- Price, Stephen J.;
- Santarius, Thomas S.;
- Carmichael, Andrew J.;
- Chiodini, Peter L.;
- Holroyd, Nancy;
- Dean, Andrew F,;
- Berriman, Matthew
Publication type:
Article
Lighter: fast and memory-efficient sequencing error correction without counting.
Published in:
Genome Biology, 2014, v. 15, n. 10, p. 509, doi. 10.1186/s13059-014-0509-9
By:
- Li Song;
- Florea, Liliana;
- Langmead, Ben
Publication type:
Article
Mobster: accurate detection of mobile element insertions in next generation sequencing data.
Published in:
Genome Biology, 2014, v. 15, n. 10, p. 2, doi. 10.1186/s13059-014-0488-x
By:
- Djie Tjwan Thung;
- Ligt, Joep de;
- Vissers, Lisenka E. M.;
- Steehouwer, Marloes;
- Kroon, Mark;
- de Vries, Petra;
- Slagboom, Eline P.;
- Kai Ye;
- Veltman, Joris A.;
- Hehir-Kwa, Jayne Y.
Publication type:
Article
A genomic and evolutionary approach reveals non-genetic drug resistance in malaria.
Published in:
Genome Biology, 2014, v. 15, n. 10, p. 511, doi. 10.1186/s13059-014-0511-2
By:
- Herman, Jonathan D.;
- Rice, Daniel P.;
- Ribacke, Ulf;
- Silterra, Jacob;
- Deik, Amy A.;
- Moss, Eli L.;
- Broadbent, Kate M.;
- Neafsey, Daniel E.;
- Desai, Michael M.;
- Clish, Clary B.;
- Mazitschek, Ralph;
- Wirth, Dyann F.
Publication type:
Article
Improved characterization of medically relevant fungi in the human respiratory tract using next-generation sequencing.
Published in:
Genome Biology, 2014, v. 15, n. 10, p. 1, doi. 10.1186/s13059-014-0487-y
By:
- Bittinge, Kyle;
- Charlson, Emily S.;
- Loy, Elizabeth;
- Shirley, David J.;
- Haas, Andrew R.;
- Laughlin, Alice;
- Yanjie Yi;
- Wu, Gary D.;
- Lewis, James D.;
- Frank, Ian;
- Cantu, Edward;
- Diamond, Joshua M.;
- Christie, Jason D.;
- Collman, Ronald G.;
- Bushman, Frederic D.
Publication type:
Article
Topographical transcriptome mapping of the mouse medial ganglionic eminence by spatially-resolved RNA-seq.
Published in:
Genome Biology, 2014, v. 15, n. 10, p. 1, doi. 10.1186/s13059-014-0486-z
By:
- Zechel, Sabrina;
- Zajac, Pawel;
- Lönnerberg, Peter;
- Ibáñez, Carlos F.;
- Linnarsson, Sten
Publication type:
Article
OncoCis: annotation of cis-regulatory mutations in cancer.
Published in:
Genome Biology, 2014, v. 15, n. 10, p. 1, doi. 10.1186/s13059-014-0485-0
By:
- Perera, Dilmi;
- Chacon, Diego;
- Thoms, Julie A. I.;
- Poulos, Rebecca C.;
- Shlien, Adam;
- Beck, Dominik;
- Campbell, Peter J.;
- Pimanda, John E.;
- Wong, Jason W. H.
Publication type:
Article
Mapping and manipulating the Mycobacterium tuberculosis transcriptome using a transcription factor overexpression-derived regulatory network.
Published in:
Genome Biology, 2014, v. 15, n. 10, p. 502, doi. 10.1186/s13059-014-0502-3
By:
- Rustad, Tige R.;
- Minch, Kyle J.;
- Shuyi Ma;
- Winkler, Jessica K.;
- Hobbs, Samuel;
- Hickey, Mark;
- Brabant, William;
- Turkarslan, Serdar;
- Price, Nathan D.;
- Baliga, Nitin S.;
- Sherman, David R.
Publication type:
Article
Bayesian transcriptome assembly.
Published in:
Genome Biology, 2014, v. 15, n. 10, p. 1, doi. 10.1186/s13059-014-0501-4
By:
- Maretty, Lasse;
- Sibbesen, Jonas Andreas;
- Krogh, Anders
Publication type:
Article
mirMark: a site-level and UTR-level classifier for miRNA target prediction.
Published in:
Genome Biology, 2014, v. 15, n. 10, p. 1, doi. 10.1186/s13059-014-0500-5
By:
- Menor, Mark;
- Ching, Travers;
- Xun Zhu;
- Garmire, David;
- Garmire, Lana X.
Publication type:
Article
Genetic adaptation of the human circadian clock to day-length latitudinal variations and relevance for affective disorders.
Published in:
Genome Biology, 2014, v. 15, n. 10, p. 1, doi. 10.1186/s13059-014-0499-7
By:
- Forni, Diego;
- Pozzoli, Uberto;
- Cagliani, Rachele;
- Tresoldi, Claudia;
- Menozzi, Giorgia;
- Riva, Stefania;
- Guerini, Franca R.;
- Comi, Giacomo P.;
- Bolognesi, Elisabetta;
- Bresolin, Nereo;
- Clerici, Mario;
- Sironi, Manuela
Publication type:
Article
Genomic mapping of the MHC transactivator CIITA using an integrated ChIP-seq and genetical genomics approach.
Published in:
Genome Biology, 2014, v. 15, n. 10, p. 1, doi. 10.1186/s13059-014-0494-z
By:
- Daniel Wong;
- Wanseon Lee;
- Peter Humburg;
- Seiko Makino;
- Evelyn Lau;
- Vivek Naranbhai;
- Fairfax, Benjamin P.;
- Kenneth Chan;
- Plant, Katharine;
- Knight, Julian C.
Publication type:
Article
Transcriptomic analysis reveals tomato genes whose expression is induced specifically during effector-triggered immunity and identifies the Epk1 protein kinase which is required for the host response to three bacterial effector proteins.
Published in:
Genome Biology, 2014, v. 15, n. 10, p. 1, doi. 10.1186/s13059-014-0492-1
By:
- Pombo, Marina A.;
- Yi Zheng;
- Fernandez-Pozo, Noe;
- Dunham, Diane M.;
- Zhangjun Fei;
- Martin, Gregory B.
Publication type:
Article
Genome-wide profiling of mouse RNA secondary structures reveals key features of the mammalian transcriptome.
Published in:
Genome Biology, 2014, v. 15, n. 10, p. 1, doi. 10.1186/s13059-014-0491-2
By:
- Incarnato, Danny;
- Neri, Francesco;
- Anselmi, Francesca;
- Oliviero, Salvatore
Publication type:
Article
MSEA: detection and quantification of mutation hotspots through mutation set enrichment analysis.
Published in:
Genome Biology, 2014, v. 15, n. 10, p. 1, doi. 10.1186/s13059-014-0489-9
By:
- Peilin Jia;
- Quan Wang;
- Qingxia Chen;
- Hutchinson, Katherine E.;
- William Pao;
- Zhongming Zhao
Publication type:
Article
Benchmarking mutation effect prediction algorithms using functionally validated cancer-related missense mutations.
Published in:
Genome Biology, 2014, v. 15, n. 10, p. 1, doi. 10.1186/s13059-014-0484-1
By:
- Martelotto, Luciano G.;
- Ng, Charlotte K. Y.;
- De Filippo, Maria R.;
- Yan Zhang;
- Piscuoglio, Salvatore;
- Lim, Raymond;
- Ronglai Shen;
- Norton, Larry;
- Reis-Filho, Jorge S.;
- Weigelt, Britta
Publication type:
Article
Methylomic profiling of human brain tissue supports a neurodevelopmental origin for schizophrenia.
Published in:
Genome Biology, 2014, v. 15, n. 10, p. 1, doi. 10.1186/s13059-014-0483-2
By:
- Pidsley, Ruth;
- Viana, Joana;
- Hannon, Eilis;
- Spiers, Helen H.;
- Troakes, Claire;
- Al-Saraj, Safa;
- Mechawar, Naguib;
- Turecki, Gustavo;
- Schalkwyk, Leonard C.;
- Bray, Nicholas J.;
- Mill, Jonathan
Publication type:
Article
\Sequence specificity incompletely defines the genome-wide occupancy of Myc.
Published in:
Genome Biology, 2014, v. 15, n. 10, p. 1, doi. 10.1186/s13059-014-0482-3
By:
- Jiannan Guo;
- Tiandao Li;
- Schipper, Joshua;
- Nilson, Kyle A.;
- Fordjour, Francis K.;
- Cooper, Jeffrey J.;
- Gordân, Raluca;
- Price, David H.
Publication type:
Article
FunSeq2: A framework for prioritizing noncoding regulatory variants in cancer.
Published in:
Genome Biology, 2014, v. 15, n. 10, p. 1, doi. 10.1186/s13059-014-0480-5
By:
- Yao Fu;
- Zhu Liu;
- Shaoke Lou;
- Bedford, Jason;
- Xinmeng Jasmine Mu;
- Yip, Kevin Y.;
- Khurana, Ekta;
- Gerstein, Mark
Publication type:
Article
Transcriptome-wide characterization of the eIF4A signature highlights plasticity in translation regulation.
Published in:
Genome Biology, 2014, v. 15, n. 10, p. 1, doi. 10.1186/s13059-014-0476-1
By:
- Rubio, Claudia A.;
- Weisburd, Benjamin;
- Holderfield, Matthew;
- Arias, Carolina;
- Eric Fang;
- DeRisi, Joseph L.;
- Fanidi, Abdallah
Publication type:
Article
MUSIC: Identification of Enriched Regions in ChIP-Seq Experiments using a Mappability-Corrected Multiscale Signal Processing Framework.
Published in:
Genome Biology, 2014, v. 15, n. 10, p. 1, doi. 10.1186/s13059-014-0474-3
By:
- Harmanci, Arif;
- Rozowsky, Joel;
- Gerstein, Mark
Publication type:
Article
Letting the data speak for themselves: a fully Bayesian approach to transcriptome assembly.
Published in:
Genome Biology, 2014, v. 15, n. 10, p. 498, doi. 10.1186/s13059-014-0498-8
By:
- Schulz, Marcel H
Publication type:
Article
Crucial timing in schizophrenia: role of DNA methylation in early neurodevelopment
Published in:
Genome Biology, 2014, v. 15, n. 10, p. 495, doi. 10.1186/s13059-014-0495-y
By:
- Ryan, Joanne;
- Saffery, Richard
Publication type:
Article
Single Cell Genomics meeting in Stockholm: from single cells to cell types.
Published in:
Genome Biology, 2014, v. 15, n. 10, p. 496, doi. 10.1186/s13059-014-0496-x
By:
- Scialdone, Antonio;
- Achim, Kaia;
- Marioni, John C
Publication type:
Article
Science is innate!
Published in:
Genome Biology, 2014, v. 15, n. 10, p. 455, doi. 10.1186/s13059-014-0477-0
By:
- Gilbert, Jack A
Publication type:
Article
A systematic genetic screen identifies new factors influencing centromeric heterochromatin integrity in fission yeast.
Published in:
Genome Biology, 2014, v. 15, n. 10, p. 1, doi. 10.1186/s13059-014-0481-4
By:
- Bayne, Elizabeth H.;
- Bijos, Dominika A.;
- White, Sharon A.;
- de Lima Alves, Flavia;
- Rappsilber, Juri;
- Allshire, Robin C.
Publication type:
Article