Works matching IS 14747596 AND DT 2012 AND VI 13 AND IP 8

Results: 20

ggbio: an R package for extending the grammar of graphics for genomic data.

Published in:

Genome Biology, 2012, v. 13, n. 8, p. 1, doi. 10.1186/gb-2012-13-8-r77

By:

Yin, Tengfei;
Cook, Dianne;
Lawrence, Michael

Publication type:

Article

A computational framework for boosting confidence in high-throughput protein-protein interaction datasets.

Published in:

Genome Biology, 2012, v. 13, n. 8, p. 1, doi. 10.1186/gb-2012-13-8-r76

By:

Hosur, Raghavendra;
Peng, Jian;
Vinayagam, Arunachalam;
Stelzl, Ulrich;
Xu, Jinbo;
Perrimon, Norbert;
Bienkowska, Jadwiga;
Berger, Bonnie

Publication type:

Article

Transcriptional profiling of long non-coding RNAs and novel transcribed regions across a diverse panel of archived human cancers.

Published in:

Genome Biology, 2012, v. 13, n. 8, p. 1, doi. 10.1186/gb-2012-13-8-r75

By:

Brunner, Alayne L.;
Beck, Andrew H.;
Edris, Badreddin;
Sweeney, Robert T.;
Zhu, Shirley X.;
Li, Rui;
Montgomery, Kelli;
Varma, Sushama;
Gilks, Thea;
Guo, Xiangqian;
Foley, Joseph W.;
Witten, Daniela M.;
Giacomini, Craig P.;
Flynn, Ryan A.;
Pollack, Jonathan R.;
Tibshirani, Robert;
Chang, Howard Y.;
van de Rijn, Matt;
West, Robert B.

Publication type:

Article

An encyclopedia of mouse DNA elements (Mouse ENCODE).

Published in:

Genome Biology, 2012, v. 13, n. 8, p. 1, doi. 10.1186/gb-2012-13-8-418

By:

Stamatoyannopoulos, John A;
Snyder, Michael;
Hardison, Ross;
Ren, Bing;
Gingeras, Thomas;
Gilbert, David M;
Groudine, Mark;
Bender, Michael;
Kaul, Rajinder;
Canfield, Theresa;
Giste, Erica;
Johnson, Audra;
Zhang, Mia;
Balasundaram, Gayathri;
Byron, Rachel;
Roach, Vaughan;
Sabo, Peter J;
Sandstrom, Richard;
Stehling, A Sandra;
Thurman, Robert E

Publication type:

Article

The rise of translational bioinformatics.

Published in:

Genome Biology, 2012, v. 13, n. 8, p. 319, doi. 10.1186/gb-2012-13-8-319

By:

Lussier, Yves A;
Haiquan Li

Publication type:

Article

Turning pipe dreams into reality.

Published in:

Genome Biology, 2012, v. 13, n. 8, p. 318, doi. 10.1186/gb-2012-13-8-318

By:

Peter Li;
Goecks, Jeremy;
Tin-Lap Lee

Publication type:

Article

The tomato genome: implications for plant breeding, genomics and evolution.

Published in:

Genome Biology, 2012, v. 13, n. 8, p. 167, doi. 10.1186/gb-2012-13-8-167

By:

Ranjan, Aashish;
Ichihashi, Yasunori;
Sinha, Neelima R

Publication type:

Article

Genomes of extremophile crucifers: new platforms for comparative genomics and beyond.

Published in:

Genome Biology, 2012, v. 13, n. 8, p. 166, doi. 10.1186/gb-2012-13-8-166

By:

Dittami, Simon M;
Tonon, Thierry

Publication type:

Article

Analysis of CLIP and iCLIP methods for nucleotide-resolution studies of protein-RNA interactions.

Published in:

Genome Biology, 2012, v. 13, n. 8, p. R67, doi. 10.1186/gb-2012-13-8-r67

By:

Sugimoto, Yoichiro;
König, Julian;
Hussain, Shobbir;
Zupan, Blaž;
Curk, Tomaž;
Frye, Michaela;
Ule, Jernej

Publication type:

Article

Novel origins of copy number variation in the dog genome.

Published in:

Genome Biology, 2012, v. 13, n. 8, p. R73, doi. 10.1186/gb-2012-13-8-r73

By:

Berglund, Jonas;
Nevalainen, Elisa M.;
Molin, Anna-Maja;
Perloski, Michele;
André, Catherine;
Zody, Michael C.;
Sharpe, Ted;
Hitte, Christophe;
Lindblad-Toh, Kerstin;
Lohi, Hannes;
Webster, Matthew T.

Publication type:

Article

Genome-wide distribution of 5-formylcytosine in embryonic stem cells is associated with transcription and depends on thymine DNA glycosylase.

Published in:

Genome Biology, 2012, v. 13, n. 8, p. R69, doi. 10.1186/gb-2012-13-8-r69

By:

Raiber, Eun-Ang;
Beraldi, Dario;
Ficz, Gabriella;
Burgess, Heather E.;
Branco, Miguel R.;
Murat, Pierre;
Oxley, David;
Booth, Michael J.;
Reik, Wolf;
Balasubramanian, Shankar

Publication type:

Article

Gene functionalities and genome structure in Bathycoccus prasinos reflect cellular specializations at the base of the green lineage.

Published in:

Genome Biology, 2012, v. 13, n. 8, p. 1, doi. 10.1186/gb-2012-13-8-r74

By:

Moreau, Hervé;
Verhelst, Bram;
Couloux, Arnaud;
Derelle, Evelyne;
Rombauts, Stephane;
Grimsley, Nigel;
Bel, Michiel Van;
Poulain, Julie;
Katinka, Michael;
Hohmann-Marriott, Martin F.;
Piganeau, Gwenael;
Rouzé, Pierre;
Silva, Corinne Da;
Wincker, Patrick;
De Peer, Yves Van;
Vandepoele, Klaas

Publication type:

Article

Proteogenomic characterization and mapping of nucleosomes decoded by Brd and HP1 proteins.

Published in:

Genome Biology, 2012, v. 13, n. 8, p. R68, doi. 10.1186/gb-2012-13-8-r68

By:

LeRoy, Gary;
Chepelev, Iouri;
DiMaggio, Peter A.;
Blanco, Mario A.;
Zee, Barry M.;
Keji Zhao;
Garcia, Benjamin A.

Publication type:

Article

Sequencing and characterization of the FVB/NJ mouse genome.

Published in:

Genome Biology, 2012, v. 13, n. 8, p. 1, doi. 10.1186/gb-2012-13-8-r72

By:

Kim Wong;
Bumpstead, Suzannah;
Der Weyden, Louise Van;
Reinholdt, Laura G.;
Wilming, Laurens G.;
Adams, David J.;
Keane, Thomas M.

Publication type:

Article

A gene expression profile of stem cell pluripotentiality and differentiation is conserved across diverse solid and hematopoietic cancers.

Published in:

Genome Biology, 2012, v. 13, n. 8, p. 1, doi. 10.1186/gb-2012-13-8-r71

By:

Palmer, Nathan P.;
Schmid, Patrick R.;
Berger, Bonnie;
Kohane, Isaac S.

Publication type:

Article

The mouse DXZ4 homolog retains Ctcf binding and proximity to Pls3 despite substantial organizational differences compared to the primate macrosatellite.

Published in:

Genome Biology, 2012, v. 13, n. 8, p. 1, doi. 10.1186/gb-2012-13-8-r70

By:

Horakova, Andrea H.;
Mauro Calabrese, J.;
McLaughlin, Christine R.;
Tremblay, Deanna C.;
Magnuson, Terry;
Chadwick, Brian P.

Publication type:

Article

Genome-wide distribution of 5-formylcytosine in ES cells is associated with transcription and depends on thymine DNA glycosylase.

Published in:

Genome Biology, 2012, v. 13, n. 8, p. 1, doi. 10.1186/gb-2012-13-8-r69

By:

Raiber, Eun-Ang;
Beraldi, Dario;
Ficz, Gabriella;
Burgess, Heather;
Branco, Miguel R.;
Murat, Pierre;
Oxley, David;
Booth, Michael J.;
Reik, Wolf;
Balasubramanian, Shankar

Publication type:

Article

Proteo-Genomic characterization and mapping of nucleosomes decoded by Brd and HP1 proteins.

Published in:

Genome Biology, 2012, v. 13, n. 8, p. 1, doi. 10.1186/gb-2012-13-8-r68

By:

LeRoy, Gary;
Chepelev, Iouri;
DiMaggio, Peter A.;
Blanco, Mario A.;
Zee, Barry M.;
Keji Zhao;
Garcia, Benjamin A.

Publication type:

Article

An encyclopedia of mouse DNA elements (Mouse ENCODE).

Published in:

Genome Biology, 2012, v. 13, n. 8, p. 1, doi. 10.1186/gb-2012-13-8-418

By:

Stamatoyannopoulos, John A.;
Snyder, Michael;
Hardison, Ross;
Ren, Bing;
Gingeras, Thomas;
Gilbert, David M.;
Groudine, Mark;
Bender, Michael;
Kaul, Rajinder;
Canfield, Theresa;
Giste, Erica;
Johnson, Audra;
Mia Zhang;
Balasundaram, Gayathri;
Byron, Rachel;
Roach, Vaughan;
Sabo, Peter J.;
Sandstrom, Richard;
Sandra Stehling, A.;
Thurman, Robert E.

Publication type:

Article

A modest proposal for an outreach section in scientific publications.

Published in:

Genome Biology, 2012, v. 13, n. 8, p. 1, doi. 10.1186/gb4038

By:

Gunter, Chris;
Osterrieder, Anne

Publication type:

Article