Works matching IS 14747596 AND DT 2012 AND VI 13 AND IP 10

Results: 30

What can epigenomics do for you?

Published in:

Genome Biology, 2012, v. 13, n. 10, p. 420, doi. 10.1186/gb-2012-13-10-420

By:

Meissner, Alexander

Publication type:

Article

The birth of the Epitranscriptome: deciphering the function of RNA modifications.

Published in:

Genome Biology, 2012, v. 13, n. 10, p. 175, doi. 10.1186/gb-2012-13-10-175

By:

Saletore, Yogesh;
Meyer, Kate;
Korlach, Jonas;
Vilfan, Igor D;
Jaffrey, Samie;
Mason, Christopher E

Publication type:

Article

Bioinformatics: living on the edge.

Published in:

Genome Biology, 2012, v. 13, n. 10, p. 321, doi. 10.1186/gb-2012-13-10-321

By:

Bellos, Evangelos;
Coin, Lachlan JM;
Kaforou, Myrsini

Publication type:

Article

The allure of the epigenome.

Published in:

Genome Biology, 2012, v. 13, n. 10, p. 419, doi. 10.1186/gb-2012-13-10-419

By:

Attar, Naomi

Publication type:

Article

Balance of DNA methylation and demethylation in cancer development.

Published in:

Genome Biology, 2012, v. 13, n. 10, p. 173, doi. 10.1186/gb-2012-13-10-2012

By:

Chun-Xiao Song;
Chuan He

Publication type:

Article

The roles of the reprogramming factors Oct4, Sox2 and Klf4 in resetting the somatic cell epigenome during induced pluripotent stem cell generation.

Published in:

Genome Biology, 2012, v. 13, n. 10, p. 251, doi. 10.1186/gb-2012-13-10-251

By:

Schmidt, Ryan;
Plath, Kathrin

Publication type:

Article

Hypothesis-driven genomics pays off.

Published in:

Genome Biology, 2012, v. 13, n. 10, p. 176, doi. 10.1186/gb4057

By:

Petsko, Gregory A

Publication type:

Article

Non-genotoxic carcinogen exposure induces defined changes in the 5-hydroxymethylome.

Published in:

Genome Biology, 2012, v. 13, n. 10, p. 1, doi. 10.1186/gb-2012-13-10-R93

By:

Thomson, John P.;
Lempiäinen, Harri;
Hackett, Jamie A.;
Nestor, Colm E.;
Müller, Arne;
Bolognani, Federico;
Oakeley, Edward J.;
Schübeler, Dirk;
Terranova, Rémi;
Reinhardt, Diana;
Moggs, Jonathan G.;
Meehan, Richard R.

Publication type:

Article

Gel-free multiplexed reduced representation bisulfite sequencing for large-scale DNA methylation profiling.

Published in:

Genome Biology, 2012, v. 13, n. 10, p. 1, doi. 10.1186/gb-2012-13-10-R92

By:

Boyle, Patrick;
Clement, Kendell;
Hongcang Gu;
Smith, Zachary D.;
Ziller, Michael;
Fostel, Jennifer L.;
Holmes, Laurie;
Meldrim, Jim;
Kelley, Fontina;
Gnirke, Andreas;
Meissner, Alexander

Publication type:

Article

Epigenetic transgenerational inheritance of somatic transcriptomes and epigenetic control regions.

Published in:

Genome Biology, 2012, v. 13, n. 10, p. 1, doi. 10.1186/gb-2012-13-10-R91

By:

Skinner, Michael K.;
Mohan, Manikkam;
Haque, M.;
Bin Zhang;
Savenkova, Marina I.

Publication type:

Article

Surveying the epigenomic landscape, one base at a time.

Published in:

Genome Biology, 2012, v. 13, n. 10, p. 250, doi. 10.1186/gb4051

By:

Zentner, Gabriel E;
Henikoff, Steven

Publication type:

Article

DNA methylation studies using twins: what are they telling us?

Published in:

Genome Biology, 2012, v. 13, n. 10, p. 172, doi. 10.1186/gb-2012-13-10-172

By:

Bell, Jordana T;
Spector, Tim D

Publication type:

Article

Epialleles in plant evolution.

Published in:

Genome Biology, 2012, v. 13, n. 10, p. 249, doi. 10.1186/gb-2012-13-10-249

By:

Weigel, Detlef;
Colot, Vincent

Publication type:

Article

Birds do it, bees do it, worms and ciliates do it too: DNA methylation from unexpected corners of the tree of life.

Published in:

Genome Biology, 2012, v. 13, n. 10, p. 174, doi. 10.1186/gb-2012-13-10-174

By:

Soojin Yi

Publication type:

Article

The landscape of DNA repeat elements in human heart failure.

Published in:

Genome Biology, 2012, v. 13, n. 10, p. 1, doi. 10.1186/gb-2012-13-10-R90

By:

Haider, Syed;
Cordeddu, Lina;
Robinson, Emma;
Movassagh, Mehregan;
Siggens, Lee;
Vujic, Ana;
Choy, Mun-Kit;
Goddard, Martin;
Lio, Pietro;
Foo, Roger

Publication type:

Article

Epigenetic interplay between mouse endogenous retroviruses and host genes.

Published in:

Genome Biology, 2012, v. 13, n. 10, p. 1, doi. 10.1186/gb-2012-13-10-R89

By:

Rebollo, Rita;
Miceli-Royer, Katharine;
Ying Zhang;
Farivar, Sharareh;
Gagnier, Liane;
Mager, Dixie L.

Publication type:

Article

CHANCE: comprehensive software for quality control and validation of ChIP-seq data.

Published in:

Genome Biology, 2012, v. 13, n. 10, p. R98, doi. 10.1186/gb-2012-13-10-r98

By:

Diaz, Aaron;
Nellore, Abhinav;
Song, Jun S.

Publication type:

Article

Differential DNA methylation in discrete developmental stages of the parasitic nematode Trichinella spiralis.

Published in:

Genome Biology, 2012, v. 13, n. 10, p. r100, doi. 10.1186/gb-2012-13-10-r100

By:

Fei Gao;
Xiaolei Liu;
Xiu-Ping Wu;
Xue-Lin Wang;
Desheng Gong;
Hanlin Lu;
Yudong Xia;
Yanxia Song;
Junwen Wang;
Jing Du;
Siyang Liu;
Xu Han;
Yizhi Tang;
Huanming Yang;
Qi Jin;
Xiuqing Zhang;
Mingyuan Liu

Publication type:

Article

Aging effects on DNA methylation modules in human brain and blood tissue.

Published in:

Genome Biology, 2012, v. 13, n. 10, p. r97, doi. 10.1186/gb-2012-13-10-r97

By:

Horvath, Steve;
Yafeng Zhang;
Langfelder, Peter;
Kahn, René S.;
Boks, Marco P.M.;
van Eijk, Kristel;
van den Berg, Leonard H.;
Ophoff, Roel A.

Publication type:

Article

Cytosine methylation and hydroxymethylation mark DNA for elimination in Oxytricha trifallax.

Published in:

Genome Biology, 2012, v. 13, n. 10, p. R99, doi. 10.1186/gb-2012-13-10-r99

By:

Bracht, John R.;
Perlman, David H.;
Landweber, Laura F.

Publication type:

Article

EpiExplorer: live exploration and global analysis of large epigenomic datasets.

Published in:

Genome Biology, 2012, v. 13, n. 10, p. R96, doi. 10.1186/gb-2012-13-10-r96

By:

Halachev, Konstantin;
Bast, Hannah;
Albrecht, Felipe;
Lengauer, Thomas;
Bock, Christoph

Publication type:

Article

Genome-wide promoter methylation analysis in neuroblastoma identifies prognostic methylation biomarkers.

Published in:

Genome Biology, 2012, v. 13, n. 10, p. 1, doi. 10.1186/gb-2012-13-10-R95

By:

Decock, Anneleen;
Ongenaert, Maté;
Hoebeeck, Jasmien;
De Preter, Katleen;
Van Peer, Gert;
Van Criekinge, Wim;
Ladenstein, Ruth;
Schulte, Johannes H.;
Noguera, Rosa;
Stallings, Raymond L.;
Van Damme, An;
Laureys, Geneviève;
Vermeulen, Joëlle;
Van Maerken, Tom;
Speleman, Frank;
Vandesompele, Jo

Publication type:

Article

Contribution of the epigenetic mark H3K27me3 to functional divergence after whole genome duplication in Arabidopsis.

Published in:

Genome Biology, 2012, v. 13, n. 10, p. 1, doi. 10.1186/gb-2012-13-10-R94

By:

Berke, Lidija;
Sanchez-Perez, Gabino F.;
Snel, Berend

Publication type:

Article

Chromatin accessibility reveals insights into androgen receptor activation and transcriptional specificity.

Published in:

Genome Biology, 2012, v. 13, n. 10, p. 1, doi. 10.1186/gb-2012-13-10-R88

By:

Tewari, Alok K.;
Yardimci, Galip Gürkan;
Shibata, Yoichiro;
Sheffield, Nathan C.;
Lingyun Song;
Taylor, Barry S.;
Georgiev, Stoyan G.;
Coetzee, Gerhard A.;
Ohler, Uwe;
Furey, Terrence S.;
Crawford, Gregory E.;
Febbo, Phillip G.

Publication type:

Article

methylKit: a comprehensive R package for the analysis of genome-wide DNA methylation profiles.

Published in:

Genome Biology, 2012, v. 13, n. 10, p. 1, doi. 10.1186/gb-2012-13-10-R87

By:

Akalin, Altuna;
Kormaksson, Matthias;
Sheng Li;
Garrett-Bakelman, Francine E.;
Figueroa, Maria E.;
Melnick, Ari;
Mason, Christopher E.

Publication type:

Article

Enhanced top-down characterization of histone post-translational modifications.

Published in:

Genome Biology, 2012, v. 13, n. 10, p. 1, doi. 10.1186/gb-2012-13-10-R86

By:

Zhixin Tian;
Tolić, Nikola;
Rui Zhao;
Moore, Ronald J.;
Hengel, Shawna M.;
Robinson, Errol W.;
Stenoien, David L.;
Si Wu;
Smith, Richard D.;
Paša-Tolić, Ljiljana

Publication type:

Article

H2A.Z landscapes and dual modifications in pluripotent and multipotent stem cells underlie complex genome regulatory functions.

Published in:

Genome Biology, 2012, v. 13, n. 10, p. 1, doi. 10.1186/gb-2012-13-10-R85

By:

Manching Ku;
Jaffe, Jacob D.;
Koche, Richard P.;
Rheinbay, Esther;
Endoh, Mitsuhiro;
Koseki, Haruhiko;
Carr, Steven A.;
Bernstein, Bradley E.

Publication type:

Article

Tissue of origin determines cancer-associated CpG island promoter hypermethylation patterns.

Published in:

Genome Biology, 2012, v. 13, n. 10, p. 1, doi. 10.1186/gb-2012-13-10-R84

By:

Sproul, Duncan;
Kitchen, Robert R.;
Nestor, Colm E.;
Dixon, J. Michael;
Sims, Andrew H.;
Harrison, David J.;
Ramsahoye, Bernard H.;
Meehan, Richard R.

Publication type:

Article

BSmooth: from whole genome bisulfite sequencing reads to differentially methylated regions.

Published in:

Genome Biology, 2012, v. 13, n. 10, p. 1, doi. 10.1186/gb-2012-13-10-R83

By:

Hansen, Kasper D.;
Langmead, Benjamin;
Irizarry, Rafael A.

Publication type:

Article

BatMeth: improved mapper for bisulfite sequencing reads on DNA methylation.

Published in:

Genome Biology, 2012, v. 13, n. 10, p. 1, doi. 10.1186/gb-2012-13-10-R82

By:

Jing-Quan Lim;
Tennakoon, Chandana;
Guoliang Li;
Wong, Eleanor;
Ruan, Yijun;
Chia-Lin Wei;
Wing-Kin Sung

Publication type:

Article