Works in Genome Biology, 2013, Vol 14, Issue 9

Results: 18

Intraspecific variation of recombination rate in maize.

Published in:

Genome Biology, 2013, v. 14, n. 9, p. R103, doi. 10.1186/gb-2013-14-9-r103

By:

Bauer, Eva;
Falque, Matthieu;
Walter, Hildrun;
Bauland, Cyril;
Camisan, Christian;
Campo, Laura;
Meyer, Nina;
Ranc, Nicolas;
Rincent, Renaud;
Schipprack, Wolfgang;
Altmann, Thomas;
Flament, Pascal;
Melchinger, Albrecht E;
Menz, Monica;
Moreno-González, Jesús;
Ouzunova, Milena;
Revilla, Pedro;
Charcosset, Alain;
Martin, Olivier C;
Schön, Chris-Carolin

Publication type:

Article

On the design of clone-based haplotyping

Published in:

Genome Biology, 2013, v. 14, n. 9, p. R100, doi. 10.1186/gb-2013-14-9-r100

By:

Lo, Christine;
Liu, Rui;
Lee, Jehyuk;
Robasky, Kimberly;
Byrne, Susan;
Lucchesi, Carolina;
Aach, John;
Church, George;
Bafna, Vineet;
Kun Zhang

Publication type:

Article

Mechanisms of eukaryotic transcription.

Published in:

Genome Biology, 2013, v. 14, n. 9, p. 311, doi. 10.1186/gb-2013-14-9-311

By:

Pufall, Miles A;
Kaplan, Craig D

Publication type:

Article

An ENU mutagenesis screen identifies novel and known genes involved in epigenetic processes in the mouse.

Published in:

Genome Biology, 2013, v. 14, n. 9, p. 1, doi. 10.1186/gb-2013-14-9-r96

By:

Daxinger, Lucia;
Harten, Sarah K.;
Oey, Harald;
Epp, Trevor;
Isbel, Luke;
Huang, Edward;
Whitelaw, Nadia;
Apedaile, Anwyn;
Sorolla, Anabel;
Yong, Joan;
Bharti, Vandhana;
Sutton, Joanne;
Ashe, Alyson;
Zhenyi Pang;
Wallace, Nathan;
Gerhardt, Daniel J.;
Blewitt, Marnie E.;
Jeddeloh, Jeffrey A.;
Whitelaw, Emma

Publication type:

Article

Crowdfunding genomics and bioinformatics

Published in:

Genome Biology, 2013, v. 14, n. 9, p. 134, doi. 10.1186/gb-2013-14-9-134

By:

Cameron, Pamela;
Corne, David W;
Mason, Christopher E;
Rosenfeld, Jeffrey

Publication type:

Article

The non-coding snRNA 7SK controls transcriptional termination, poising, and bidirectionality in embryonic stem cells.

Published in:

Genome Biology, 2013, v. 14, n. 9, p. 98, doi. 10.1186/gb-2013-14-9-r98

By:

Castelo-Branco, Gonçalo;
Amaral, Paulo P;
Engström, Pär G;
Robson, Samuel C;
Marques, Sueli C;
Bertone, Paul;
Kouzarides, Tony

Publication type:

Article

The mutational landscape of chromatin regulatory factors across 4,623 tumor samples.

Published in:

Genome Biology, 2013, v. 14, n. 9, p. 106, doi. 10.1186/gb-2013-14-9-r106

By:

Gonzalez-Perez, Abel;
Jene-Sanz, Alba;
Lopez-Bigas, Nuria

Publication type:

Article

Runaway transcription.

Published in:

Genome Biology, 2013, v. 14, n. 9, p. 133, doi. 10.1186/gb-2013-14-9-133

By:

Guo, Jiannan;
Li, Tiandao;
Price, David H

Publication type:

Article

Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure.

Published in:

Genome Biology, 2013, v. 14, n. 9, p. 1, doi. 10.1186/gb-2013-14-9-r97

By:

Muzzey, Dale;
Schwartz, Katja;
Weissman, Jonathan S.;
Sherlock, Gavin

Publication type:

Article

Genome-wide signatures of differential DNA methylation in pediatric acute lymphoblastic leukemia.

Published in:

Genome Biology, 2013, v. 14, n. 9, p. 105, doi. 10.1186/gb-2013-14-9-r105

By:

Nordlund, Jessica;
Bäcklin, Christofer L;
Wahlberg, Per;
Busche, Stephan;
Berglund, Eva C;
Eloranta, Maija-Leena;
Flaegstad, Trond;
Forestier, Erik;
Frost, Britt-Marie;
Harila-Saari, Arja;
Heyman, Mats;
Jónsson, Ólafur G;
Larsson, Rolf;
Palle, Josefine;
Rönnblom, Lars;
Schmiegelow, Kjeld;
Sinnett, Daniel;
Söderhäll, Stefan;
Pastinen, Tomi;
Gustafsson, Mats G

Publication type:

Article

PINTing for p53.

Published in:

Genome Biology, 2013, v. 14, n. 9, p. 132, doi. 10.1186/gb-2013-14-9-132

By:

Shiekhattar, Ramin

Publication type:

Article

Differential DNA methylation with age displays both common and dynamic features across human tissues that are influenced by CpG landscape.

Published in:

Genome Biology, 2013, v. 14, n. 9, p. 1, doi. 10.1186/gb-2013-14-9-r102

By:

Day, Kenneth;
Waite, Lindsay L.;
Thalacker-Mercer, Anna;
West, Andrew;
Bamman, Marcas M.;
Brooks, James D.;
Myers, Richard M.;
Absher, Devin

Publication type:

Article

Reducing assembly complexity of microbial genomes with single-molecule sequencing.

Published in:

Genome Biology, 2013, v. 14, n. 9, p. 1, doi. 10.1186/gb-2013-14-9-r101

By:

Koren, Sergey;
Harhay, Gregory P.;
Smith, Timothy P. L.;
Bono, James L.;
Harhay, Dayna M.;
Mcvey, Scott D.;
Radune, Diana;
Bergman, Nicholas H.;
Phillippy, Adam M.

Publication type:

Article

PU.1 target genes undergo Tet2-coupled demethylation and DNMT3b-mediated methylation in monocyte-to-osteoclast differentiation.

Published in:

Genome Biology, 2013, v. 14, n. 9, p. 1, doi. 10.1186/gb-2013-14-9-r99

By:

de la Rica, Lorenzo;
Rodríguez-Ubreva, Javier;
García, Mireia;
Islam, Abul B. M. M. K.;
Urquiza, José M.;
Hernando, Henar;
Christensen, Jesper;
Helin, Kristian;
Gómez-Vaquero, Carmen;
Ballestar, Esteban

Publication type:

Article

Pint lincRNA connects the p53 pathway with epigenetic silencing by the Polycomb repressive complex 2.

Published in:

Genome Biology, 2013, v. 14, n. 9, p. R104, doi. 10.1186/gb-2013-14-9-r104

By:

Marín-Béjar, Oskar;
Marchese, Francesco P;
Athie, Alejandro;
Sánchez, Yolanda;
González, Jovanna;
Segura, Victor;
Huang, Lulu;
Moreno, Isabel;
Navarro, Alfons;
Monzó, Mariano;
García-Foncillas, Jesús;
Rinn, John L;
Guo, Shuling;
Huarte, Maite

Publication type:

Article

Genome sequencing reveals fine scale diversification and reticulation history during speciation in Sus.

Published in:

Genome Biology, 2013, v. 14, n. 9, p. R107, doi. 10.1186/gb-2013-14-9-r107

By:

Frantz, Laurent A. F.;
Schraiber, Joshua G;
Madsen, Ole;
Megens, Hendrik-Jan;
Bosse, Mirte;
Paudel, Yogesh;
Semiadi, Gono;
Meijaard, Erik;
Ning Li;
Crooijmans, Richard P. M. A.;
Archibald, Alan L;
Slatkin, Montgomery;
Schook, Lawrence B;
Larson, Greger;
Groenen, Martien A. M.

Publication type:

Article

Comprehensive evaluation of differential gene expression analysis methods for RNA-seq data.

Published in:

Genome Biology, 2013, v. 14, n. 9, p. R95, doi. 10.1186/gb-2013-14-9-r95

By:

Rapaport, Franck;
Khanin, Raya;
Liang, Yupu;
Pirun, Mono;
Krek, Azra;
Zumbo, Paul;
Mason, Christopher E;
Socci, Nicholas D.;
Betel, Doron

Publication type:

Article

Are there unequivocal criteria to label a given protein as a toxin? Permissive versus conservative annotation processes.

Published in:

Genome Biology, 2013, v. 14, n. 9, p. 1, doi. 10.1186/gb-2013-14-9-406

By:

Terrat, Yves;
Ducancel, Frédéric

Publication type:

Article