Works matching IS 14726807 AND DT 2012 AND VI 12 AND IP 1

Results: 33

Structural and molecular basis of interaction of HCV non-structural protein 5A with human casein kinase 1α and PKR.

Published in:

BMC Structural Biology, 2012, v. 12, n. 1, p. 28, doi. 10.1186/1472-6807-12-28

By:

Sudha, Govindarajan;
Yamunadevi, Subburaj;
Tyagi, Nidhi;
Das, Saumitra;
Srinivasan, Narayanaswamy

Publication type:

Article

In silico identification and characterization of the ion transport specificity for P-type ATPases in the Mycobacterium tuberculosis complex.

Published in:

BMC Structural Biology, 2012, v. 12, n. 1, p. 1, doi. 10.1186/1472-6807-12-25

By:

Novoa-Aponte, Lorena;
León-Torres, Andrés;
Patiño-Ruiz, Miyer;
Cuesta-Bernal, Jenifer;
Salazar, Luz-Mary;
Landsman, David;
Mariño-Ramírez, Leonardo;
Soto, Carlos-Yesid

Publication type:

Article

Ternary complex structures of human farnesyl pyrophosphate synthase bound with a novel inhibitor and secondary ligands provide insights into the molecular details of the enzyme's active site closure.

Published in:

BMC Structural Biology, 2012, v. 12, n. 1, p. 32, doi. 10.1186/1472-6807-12-32

By:

Jaeok Park;
Yih-Shyan Lin;
De Schutter, Joris W.;
Tsantrizos, Youla S.;
Berghuis, Albert M.

Publication type:

Article

Protein Nano-Object Integrator (ProNOI) for generating atomic style objects for molecular modeling.

Published in:

BMC Structural Biology, 2012, v. 12, n. 1, p. 31, doi. 10.1186/1472-6807-12-31

By:

Smith, Nicholas;
Campbell, Brandon;
Lin Li;
Chuan Li;
Alexov, Emil

Publication type:

Article

Theoretical investigation on structural, functional and epitope of a 12 kDa excretory-secretory protein from Toxoplasma gondii.

Published in:

BMC Structural Biology, 2012, v. 12, n. 1, p. 30, doi. 10.1186/1472-6807-12-30

By:

Yap Boon Wooi Tommy;
Theam Soon Lim;
Rahmah Noordin;
Geita Saadatnia;
Yee Siew Choong

Publication type:

Article

MTMDAT-HADDOCK: High-throughput, protein complex structure modeling based on limited proteolysis and mass spectrometry.

Published in:

BMC Structural Biology, 2012, v. 12, n. 1, p. 29, doi. 10.1186/1472-6807-12-29

By:

Hennig, Janosch;
de Vries, Sjoerd J.;
Hennig, Klaus D. M.;
Randles, Leah;
Walters, Kylie J.;
Sunnerhagen, Maria;
Bonvin, Alexandre M. J. J.

Publication type:

Article

The possible mechanisms of CYP2E1 interactions with HSP90 and the influence of ethanol on them.

Published in:

BMC Structural Biology, 2012, v. 12, n. 1, p. 33, doi. 10.1186/1472-6807-12-33

By:

Kitam, Volodymyr O.;
Maksymchuk, Oksana V.;
Chashchyn, Mykola O.

Publication type:

Article

Exploring the binding of BACE-1 inhibitors using comparative binding energy analysis (COMBINE).

Published in:

BMC Structural Biology, 2012, v. 12, n. 1, p. 21, doi. 10.1186/1472-6807-12-21

By:

Shu Liu;
Rao Fu;
Xiao Cheng;
Sheng-Ping Chen;
Li-Hua Zhou

Publication type:

Article

Functional region prediction with a set of appropriate homologous sequences-an index for sequence selection by integrating structure and sequence information with spatial statistics.

Published in:

BMC Structural Biology, 2012, v. 12, n. 1, p. 11, doi. 10.1186/1472-6807-12-11

By:

Wataru Nemoto;
Hiroyuki Toh

Publication type:

Article

Evolutionarily consistent families in SCOP: sequence, structure and function.

Published in:

BMC Structural Biology, 2012, v. 12, n. 1, p. 27, doi. 10.1186/1472-6807-12-27

By:

Pethica, Ralph B.;
Levitt, Michael;
Gough, Julian

Publication type:

Article

Structure Motivator: A tool for exploring small three-dimensional elements in proteins.

Published in:

BMC Structural Biology, 2012, v. 12, n. 1, p. 26, doi. 10.1186/1472-6807-12-26

By:

Leader, David P.;
Milner-White, E. James

Publication type:

Article

Peptide binding to HLA-DP proteins at pH 5.0 and pH 7.0: a quantitative molecular docking study.

Published in:

BMC Structural Biology, 2012, v. 12, n. 1, p. 20, doi. 10.1186/1472-6807-12-20

By:

Patronov, Atanas;
Dimitrov, Ivan;
Flower, Darren R.;
Doytchinova, Irini

Publication type:

Article

Dependence of α-helical and β-sheet amino acid propensities on the overall protein fold type.

Published in:

BMC Structural Biology, 2012, v. 12, n. 1, p. 18, doi. 10.1186/1472-6807-12-18

By:

Fujiwara, Kazuo;
Toda, Hiromi;
Ikeguchi, Masamichi

Publication type:

Article

Structural and mechanistic investigations on Salmonella typhimurium acetate kinase (AckA): identification of a putative ligand binding pocket at the dimeric interface.

Published in:

BMC Structural Biology, 2012, v. 12, n. 1, p. 24, doi. 10.1186/1472-6807-12-24

By:

Chittori, Sagar;
Savithri, Handanahal S.;
Murthy, Mathur RN

Publication type:

Article

Crystal structure of HutZ, a heme storage protein from Vibrio cholerae: A structural mismatch observed in the region of high sequence conservation.

Published in:

BMC Structural Biology, 2012, v. 12, n. 1, p. 23, doi. 10.1186/1472-6807-12-23

By:

Xiuhua Liu;
Jing Gong;
Tiandi Wei;
Zhi Wang;
Qian Du;
Deyu Zhu;
Yan Huang;
Sujuan Xu;
Lichuan Gu

Publication type:

Article

Enabling structure-based drug design of Tyk2 through co-crystallization with a stabilizing aminoindazole inhibitor.

Published in:

BMC Structural Biology, 2012, v. 12, n. 1, p. 22, doi. 10.1186/1472-6807-12-22

By:

Argiriadi, Maria A.;
Goedken, Eric R.;
Banach, David;
Borhani, David W.;
Burchat, Andrew;
Dixon, Richard W.;
Marcotte, Doug;
Overmeyer, Gary;
Pivorunas, Valerie;
Sadhukhan, Ramkrishna;
Sousa, Silvino;
Moore, Nigel St John;
Tomlinson, Medha;
Voss, Jeffrey;
Lu Wang;
Wishart, Neil;
Woller, Kevin;
Talanian, Robert V.

Publication type:

Article

Structure of human aspartyl aminopeptidase complexed with substrate analogue: insight into catalytic mechanism, substrate specificity and M18 peptidase family.

Published in:

BMC Structural Biology, 2012, v. 12, n. 1, p. 14, doi. 10.1186/1472-6807-12-14

By:

Chaikuad, Apirat;
Pilka, Ewa S.;
De Riso, Antonio;
von Delft, Frank;
Kavanagh, Kathryn L.;
V‚nien-Bryan, Catherine;
Oppermann, Udo;
Yue, Wyatt W.

Publication type:

Article

Conservation and divergence between cytoplasmic and muscle-specific actin capping proteins: insights from the crystal structure of cytoplasmic Cap32/34 from Dictyostelium discoideum.

Published in:

BMC Structural Biology, 2012, v. 12, n. 1, p. 12, doi. 10.1186/1472-6807-12-12

By:

Eckert, Christian;
Goretzki, Agnieszka;
Faberova, Maria;
Kollmar, Martin

Publication type:

Article

A three-dimensional topology of complex I inferred from evolutionary correlations.

Published in:

BMC Structural Biology, 2012, v. 12, n. 1, p. 19, doi. 10.1186/1472-6807-12-19

By:

Kensche, Philip R.;
Duarte, Isabel;
Huynen, Martijn A.

Publication type:

Article

Crystal structure of the Yersinia enterocolitica type III secretion chaperone SycD in complex with a peptide of the minor translocator YopD.

Published in:

BMC Structural Biology, 2012, v. 12, n. 1, p. 13, doi. 10.1186/1472-6807-12-13

By:

Schreiner, Madeleine;
Niemann, Hartmut H.

Publication type:

Article

Integrative structural modeling with small angle X-ray scattering profiles.

Published in:

BMC Structural Biology, 2012, v. 12, n. 1, p. 17, doi. 10.1186/1472-6807-12-17

By:

Schneidman-Duhovny, Dina;
Seung Joong Kim;
Sali, Andrej

Publication type:

Article

Structural characterization of S100A15 reveals a novel zinc coordination site among S100 proteins and altered surface chemistry with functional implications for receptor binding.

Published in:

BMC Structural Biology, 2012, v. 12, n. 1, p. 16, doi. 10.1186/1472-6807-12-16

By:

Murray1,2,, Jill I.;
Tonkin2,, Michelle L.;
Whiting1,, Amanda L.;
Peng2,, Fangni;
Farnell1,2,, Benjamin;
Cullen, Jay T.;
Hof, Fraser;
Boulanger, Martin J.

Publication type:

Article

Structural insight into the substrate- and dioxygen-binding manner in the catalytic cycle of Rieske nonheme iron oxygenase system, carbazole 1,9a-dioxygenase.

Published in:

BMC Structural Biology, 2012, v. 12, n. 1, p. 15, doi. 10.1186/1472-6807-12-15

By:

Yuji Ashikawa;
Zui Fujimoto;
Yusuke Usami;
Kengo Inoue;
Haruko Noguchi;
Hisakazu Yamane;
Hideaki Nojiri

Publication type:

Article

Modeling holo-ACP:DH and holo-ACP:KR complexes of modular polyketide synthases: a docking and molecular dynamics study.

Published in:

BMC Structural Biology, 2012, v. 12, n. 1, p. 10, doi. 10.1186/1472-6807-12-10

By:

Anand, Swadha;
Mohanty, Debasisa

Publication type:

Article

Reliable structural interpretation of small-angle scattering data from bio-molecules in solution - the importance of quality control and a standard reporting framework.

Published in:

BMC Structural Biology, 2012, v. 12, n. 1, p. 9, doi. 10.1186/1472-6807-12-9

By:

Jacques, David A.;
Mitchell Guss, Jules;
Trewhella, Jill

Publication type:

Article

Are different stoichiometries feasible for complexes between lymphotoxin-alpha and tumor necrosis factor receptor 1?

Published in:

BMC Structural Biology, 2012, v. 12, n. 1, p. 8, doi. 10.1186/1472-6807-12-8

By:

Mascarenhas, Nahren Manuel;
Kï¿½stner, Johannes

Publication type:

Article

Crystal structure of a new benzoic acid inhibitor of influenza neuraminidase bound with a new tilt induced by overpacking subsite C6.

Published in:

BMC Structural Biology, 2012, v. 12, n. 1, p. 7, doi. 10.1186/1472-6807-12-7

By:

Venkatramani, Lalitha;
Johnson, Eric S.;
Kolavi, Gundurao;
Air, Gillian M.;
Brouillette, Wayne J.;
Mooers, Blaine H. M.

Publication type:

Article

Comparison of tertiary structures of proteins in protein-protein complexes with unbound forms suggests prevalence of allostery in signalling proteins.

Published in:

BMC Structural Biology, 2012, v. 12, n. 1, p. 6, doi. 10.1186/1472-6807-12-6

By:

Swapna, Lakshmipuram S.;
Mahajan, Swapnil;
de Brevern, Alexandre G.;
Srinivasan, Narayanaswamy

Publication type:

Article

Exploring functionally related enzymes using radially distributed properties of active sites around the reacting points of bound ligands.

Published in:: BMC Structural Biology, 2012, v. 12, n. 1, p. 5, doi. 10.1186/1472-6807-12-5
Publication type:: Article

Correction: Prediction and analysis of the modular structure of cytochrome P450 monooxygenases.

Published in:: 2012
Publication type:: Correction Notice

A structural model of the E. coli PhoB Dimer in the transcription initiation complex.

Published in:: BMC Structural Biology, 2012, v. 12, n. 1, p. 3, doi. 10.1186/1472-6807-12-3
Publication type:: Article

Crystal structures from the Plasmodium peroxiredoxins: new insights into oligomerization and product binding.

Published in:: BMC Structural Biology, 2012, v. 12, n. 1, p. 2, doi. 10.1186/1472-6807-12-2
Publication type:: Article

A transcriptional-switch model for Slr1738-controlled gene expression in the cyanobacterium Synechocystis.

Published in:

BMC Structural Biology, 2012, v. 12, n. 1, p. 1, doi. 10.1186/1472-6807-12-1

By:

Garcin, Paul;
Delalande, Olivier;
Zhang, Ju-Yuan;
Cassier-Chauvat, Corinne;
Chauvat, Franck;
Boulard, Yves

Publication type:

Article