Works matching IS 14726807 AND DT 2011 AND VI 11 AND IP 1

Results: 50

Structural adaptation of extreme halophilic proteins through decrease of conserved hydrophobic contact surface.

Published in:: BMC Structural Biology, 2011, v. 11, n. 1, p. 50, doi. 10.1186/1472-6807-11-50
Publication type:: Article

Docking studies on novel analogues of 8 methoxy fluoroquinolones against GyrA mutants of Mycobacterium tuberculosis.

Published in:: BMC Structural Biology, 2011, v. 11, n. 1, p. 47, doi. 10.1186/1472-6807-11-47
Publication type:: Article

Structural comparison of tRNA m1 A58 methyltransferases revealed different molecular strategies to maintain their oligomeric architecture under extreme conditions.

Published in:: BMC Structural Biology, 2011, v. 11, n. 1, p. 48, doi. 10.1186/1472-6807-11-48
Publication type:: Article

The redundancy of NMR restraints can be used to accelerate the unfolding behavior of an SH3 domain during molecular dynamics simulations.

Published in:: BMC Structural Biology, 2011, v. 11, n. 1, p. 46, doi. 10.1186/1472-6807-11-46
Publication type:: Article

The Host-Pathogen interaction of human cyclophilin A and HIV-1 Vpr requires specific N-terminal and novel C-terminal domains.

Published in:: BMC Structural Biology, 2011, v. 11, n. 1, p. 49, doi. 10.1186/1472-6807-11-49
Publication type:: Article

Benchmarks for flexible and rigid transcription factor-DNA docking.

Published in:: BMC Structural Biology, 2011, v. 11, n. 1, p. 45, doi. 10.1186/1472-6807-11-45
Publication type:: Article

Central domain deletions affect the SAXS solution structure and function of Yeast Hsp40 proteins Sis1 and Ydj1.

Published in:: BMC Structural Biology, 2011, v. 11, n. 1, p. 40, doi. 10.1186/1472-6807-11-40
Publication type:: Article

Hydration studies on the archaeal protein Sso7d using NMR measurements and MD simulations.

Published in:: BMC Structural Biology, 2011, v. 11, n. 1, p. 44, doi. 10.1186/1472-6807-11-44
Publication type:: Article

Computational analysis of a novel mutation in ETFDH gene highlights its long-range effects on the FAD-binding motif.

Published in:: BMC Structural Biology, 2011, v. 11, n. 1, p. 43, doi. 10.1186/1472-6807-11-43
Publication type:: Article

Comparative void-volume analysis of psychrophilic and mesophilic enzymes: Structural bioinformatics of psychrophilic enzymes reveals sources of core flexibility.

Published in:: BMC Structural Biology, 2011, v. 11, n. 1, p. 42, doi. 10.1186/1472-6807-11-42
Publication type:: Article

Structural characterization of a ribose-5-phosphate isomerase B from the pathogenic fungus Coccidioides immitis.

Published in:: BMC Structural Biology, 2011, v. 11, n. 1, p. 39, doi. 10.1186/1472-6807-11-39
Publication type:: Article

Evolutionary traces decode molecular mechanism behind fast pace of myosin XI.

Published in:: BMC Structural Biology, 2011, v. 11, n. 1, p. 35, doi. 10.1186/1472-6807-11-35
Publication type:: Article

Hydration sites of unpaired RNA bases: a statistical analysis of the PDB structures.

Published in:: BMC Structural Biology, 2011, v. 11, n. 1, p. 41, doi. 10.1186/1472-6807-11-41
Publication type:: Article

A conformation ensemble approach to protein residue-residue contact.

Published in:: BMC Structural Biology, 2011, v. 11, n. 1, p. 38, doi. 10.1186/1472-6807-11-38
Publication type:: Article

Structural studies of the PARP-1 BRCT domain.

Published in:: BMC Structural Biology, 2011, v. 11, n. 1, p. 37, doi. 10.1186/1472-6807-11-37
Publication type:: Article

Novel dimeric β-helical model of an ice nucleation protein with bridged active sites.

Published in:: BMC Structural Biology, 2011, v. 11, n. 1, p. 36, doi. 10.1186/1472-6807-11-36
Publication type:: Article

Prediction of functionally important residues in globular proteins from unusual central distances of amino acids.

Published in:: BMC Structural Biology, 2011, v. 11, n. 1, p. 34, doi. 10.1186/1472-6807-11-34
Publication type:: Article

Atomic resolution structure of EhpR: phenazine resistance in Enterobacter agglomerans Eh1087 follows principles of bleomycin/mitomycin C resistance in other bacteria.

Published in:: BMC Structural Biology, 2011, v. 11, n. 1, p. 33, doi. 10.1186/1472-6807-11-33
Publication type:: Article

Binary classification of protein molecules into intrinsically disordered and ordered segments.

Published in:: BMC Structural Biology, 2011, v. 11, n. 1, p. 29, doi. 10.1186/1472-6807-11-29
Publication type:: Article

A model for the Escherichia coli FtsB/FtsL/FtsQ cell division complex.

Published in:: BMC Structural Biology, 2011, v. 11, n. 1, p. 28, doi. 10.1186/1472-6807-11-28
Publication type:: Article

Peptide binding prediction for the human class II MHC allele HLA-DP2: a molecular docking approach.

Published in:

BMC Structural Biology, 2011, v. 11, n. 1, p. 32, doi. 10.1186/1472-6807-11-32

By:

Patronov, Atanas;
Dimitrov, Ivan;
Flower, Darren R.;
Doytchinova, Irini

Publication type:

Article

Dynamical Basis for Drug Resistance of HIV-1 Protease.

Published in:

BMC Structural Biology, 2011, v. 11, n. 1, p. 31, doi. 10.1186/1472-6807-11-31

By:

Yi Mao

Publication type:

Article

Structure of catalytic domain of Matriptase in complex with Sunflower trypsin inhibitor-1.

Published in:

BMC Structural Biology, 2011, v. 11, n. 1, p. 30, doi. 10.1186/1472-6807-11-30

By:

Cai Yuan;
Liqing Chen;
Meehan, Edward J.;
Daly, Norelle;
Craik, David J.;
Mingdong Huang;
Ngo, Jacky C.

Publication type:

Article

Crystal structure of alkyl hydroperoxidase D like protein PA0269 from Pseudomonas aeruginosa: Homology of the AhpD-like structural family.

Published in:

BMC Structural Biology, 2011, v. 11, n. 1, p. 27, doi. 10.1186/1472-6807-11-27

By:

Clarke, Teresa E.;
Romanov, Vladimir;
Chirgadze, Yuri N.;
Klomsiri, Chananat;
Kisselman, Gera;
Wu-Brown, Jean;
Poole, Leslie B.;
Pai, Emil F.;
Chirgadze, Nickolay Y.

Publication type:

Article

A new in-silico method for determination of helical transmembrane domains based on the PepLook scan: application to IL-2Rβ and IL-2Rγc receptor chains.

Published in:

BMC Structural Biology, 2011, v. 11, n. 1, p. 26, doi. 10.1186/1472-6807-11-26

By:

Charlois, Yan;
Lins, Laurence;
Brasseur, Robert

Publication type:

Article

Analysis of the unique structural and physicochemical properties of the DraD/AfaD invasin in the context of its belonging to the family of chaperone/usher type fimbrial subunits.

Published in:

BMC Structural Biology, 2011, v. 11, n. 1, p. 25, doi. 10.1186/1472-6807-11-25

By:

Piątek, Rafał J.;
Bruździak, Piotr;
Zalewska-Piątek, Beata M.;
Wojciechowski, Marek A.;
Namieśnik, Justyna M.;
Kur, Józef W.

Publication type:

Article

Exploring NMR ensembles of calcium binding proteins: Perspectives to design inhibitors of protein-protein interactions.

Published in:

BMC Structural Biology, 2011, v. 11, n. 1, p. 24, doi. 10.1186/1472-6807-11-24

By:

Isvoran, Adriana;
Badel, Anne;
Craescu, Constantin T.;
Miron, Simona;
Miteva, Maria A.

Publication type:

Article

Crystal structures of a halophilic archaeal malate synthase from Haloferax volcanii and comparisons with isoforms A and G.

Published in:

BMC Structural Biology, 2011, v. 11, n. 1, p. 23, doi. 10.1186/1472-6807-11-23

By:

Bracken, Colten D.;
Neighbor, Amber M.;
Lamlenn, Kenneth K.;
Thomas, Geoffrey C.;
Schubert, Heidi L.;
Whitby, Frank G.;
Howard, Bruce R.

Publication type:

Article

The structure of the Ca2+-binding, glycosylated F-spondin domain of F-spondin - A C2-domain variant in an extracellular matrix protein.

Published in:

BMC Structural Biology, 2011, v. 11, n. 1, p. 22, doi. 10.1186/1472-6807-11-22

By:

Tan, Kemin;
Lawler, Jack

Publication type:

Article

A library of protein surface patches discriminates between native structures and decoys generated by structure prediction servers.

Published in:

BMC Structural Biology, 2011, v. 11, n. 1, p. 20, doi. 10.1186/1472-6807-11-20

By:

Gamliel, Roi;
Kedem, Klara;
Kolodny, Rachel;
Keasar, Chen

Publication type:

Article

Crystal structures of Burkholderia cenocepacia dihydropteroate synthase in the apo-form and complexed with the product 7,8-dihydropteroate.

Published in:

BMC Structural Biology, 2011, v. 11, n. 1, p. 21, doi. 10.1186/1472-6807-11-21

By:

Morgan, Rachel E.;
Batot, Gaëlle O.;
Dement, Jennifer M.;
Rao, Vincenzo A.;
Eadsforth, Thomas C.;
Hunter, William N.

Publication type:

Article

Exploiting the high-resolution crystal structure of Staphylococcus aureus MenH to gain insight into enzyme activity.

Published in:

BMC Structural Biology, 2011, v. 11, n. 1, p. 19, doi. 10.1186/1472-6807-11-19

By:

Dawson, Alice;
Fyfe, Paul K.;
Gillet, Florian;
Hunter, William N.

Publication type:

Article

Crystallographic analysis reveals the structural basis of the high-affinity binding of iophenoxic acid to human serum albumin.

Published in:

BMC Structural Biology, 2011, v. 11, n. 1, p. 18, doi. 10.1186/1472-6807-11-18

By:

Ryan, Ali J.;
Chun-wa Chung;
Curry, Stephen

Publication type:

Article

Gα16 interacts with tetratricopepetide repeat 1 (TPR1) through its β3 region to activate Ras independently of phospholipase Cβ signaling.

Published in:

BMC Structural Biology, 2011, v. 11, n. 1, p. 17, doi. 10.1186/1472-6807-11-17

By:

Liu, Andrew M. F.;
Lo, Rico K. H.;
Guo, Emily X.;
Ho, Maurice K. C.;
Ye, Richard D.;
Wong, Yung H.

Publication type:

Article

Molecular modeling and in silico characterization of Mycobacterium tuberculosis TlyA: Possible misannotation of this tubercle bacilli-hemolysin.

Published in:

BMC Structural Biology, 2011, v. 11, n. 1, p. 16, doi. 10.1186/1472-6807-11-16

By:

Arenas, Nelson E.;
Salazar, Luz M.;
Soto, Carlos Y.;
Vizcaíno, Carolina;
Patarroyo, Manuel E.;
Patarroyo, Manuel A.;
Gómez, Arley

Publication type:

Article

Structural studies of the mechanism for biosensing antibiotics in a fluoresceinlabeled βlactamase.

Published in:

BMC Structural Biology, 2011, v. 11, n. 1, p. 15, doi. 10.1186/1472-6807-11-15

By:

Wai-Ting Wong;
Ho-Wah Au;
Hong-Kin Yap;
Yun-Chung Leung;
Kwok-Yin Wong;
Yanxiang Zhao

Publication type:

Article

Secondary structure of protamine in sperm nuclei: an infrared spectroscopy study.

Published in:

BMC Structural Biology, 2011, v. 11, n. 1, p. 14, doi. 10.1186/1472-6807-11-14

By:

Roque, Alicia;
Ponte, Inma;
Suau, Pedro

Publication type:

Article

Structural analysis of heme proteins: implications for design and prediction.

Published in:

BMC Structural Biology, 2011, v. 11, n. 1, p. 13, doi. 10.1186/1472-6807-11-13

By:

Ting Li;
Bonkovsky, Herbert L.;
Jun-tao Guo

Publication type:

Article

Human Nek6 is a monomeric mostly globular kinase with an unfolded short N-terminal domain.

Published in:

BMC Structural Biology, 2011, v. 11, n. 1, p. 12, doi. 10.1186/1472-6807-11-12

By:

Meirelles, Gabriela V.;
Silva, Júlio C.;
Mendonça, Yuri de A.;
Ramos, Carlos H. I.;
Torriani, Iris L.;
Kobarg, Jörg

Publication type:

Article

Inositol pentakisphosphate isomers bind PH domains with varying specificity and inhibit phosphoinositide interactions.

Published in:

BMC Structural Biology, 2011, v. 11, n. 1, p. 11, doi. 10.1186/1472-6807-11-11

By:

Jackson, Sean G;
Al-Saigh, Sarra;
Schultz, Carsten;
Junop, Murray S.

Publication type:

Article

Thermostability in endoglucanases is fold-specific.

Published in:

BMC Structural Biology, 2011, v. 11, n. 1, p. 10, doi. 10.1186/1472-6807-11-10

By:

Yennamalli, Ragothaman M.;
Rader, Andrew J.;
Wolt, Jeffrey D.;
Sen, Taner Z.

Publication type:

Article

Deciphering the shape and deformation of secondary structures through local conformation analysis.

Published in:

BMC Structural Biology, 2011, v. 11, n. 1, p. 9, doi. 10.1186/1472-6807-11-9

By:

Baussand, Julie;
Camproux, Anne-Claude

Publication type:

Article

Analysis of electric moments of RNA-binding proteins: implications for mechanism and prediction.

Published in:

BMC Structural Biology, 2011, v. 11, n. 1, p. 8, doi. 10.1186/1472-6807-11-8

By:

Ahmad, Shandar;
Sarai, Akinori

Publication type:

Article

DeStripe: frequency-based algorithm for removing stripe noises from AFM images.

Published in:

BMC Structural Biology, 2011, v. 11, n. 1, p. 7, doi. 10.1186/1472-6807-11-7

By:

Chen, Shu-wen W.;
Pellequer, Jean-Luc

Publication type:

Article

Graphical analysis of pH-dependent properties of proteins predicted using PROPKA.

Published in:

BMC Structural Biology, 2011, v. 11, n. 1, p. 6, doi. 10.1186/1472-6807-11-6

By:

Rostkowski, Michał;
Olsson, Mats H. M.;
Søndergaard, Chresten R.;
Jensen, Jan H.

Publication type:

Article

In Silico Quantitative Structure-Activity Relationship Studies on P-gp Modulators of Tetrahydroisoquinoline-Ethyl-Phenylamine Series.

Published in:

BMC Structural Biology, 2011, v. 11, n. 1, p. 5, doi. 10.1186/1472-6807-11-5

By:

Gadhe, Changdev G.;
Madhavan, Thirumurthy;
Kothandan, Gugan;
Seung Joo Cho

Publication type:

Article

Differential molecular information of maurotoxin peptide recognizing IKCa and Kv1.2 channels explored by computational simulation.

Published in:

BMC Structural Biology, 2011, v. 11, n. 1, p. 3, doi. 10.1186/1472-6807-11-3

By:

Hong Yi;
Su Qiu;
Yingliang Wu;
Wenxin Li;
Baoshan Wang

Publication type:

Article

Structural insights into the membrane-extracted dimeric form of the ATPase TraB from the Escherichia coli pKM101 conjugation system.

Published in:

BMC Structural Biology, 2011, v. 11, n. 1, p. 1, doi. 10.1186/1472-6807-11-4

By:

Durand, Eric;
Waksman, Gabriel;
Receveur-Brechot, Veronique

Publication type:

Article

1,000 structures and more from the MCSG.

Published in:

BMC Structural Biology, 2011, v. 11, n. 1, p. 1, doi. 10.1186/1472-6807-11-2

By:

Lee, David;
de Beer, Tjaart A. P.;
Laskowski, Roman A.;
Thornton, Janet M.;
Orengo, Christine A.

Publication type:

Article

An ensemble of B-DNA dinucleotide geometries lead to characteristic nucleosomal DNA structure and provide plasticity required for gene expression.

Published in:

BMC Structural Biology, 2011, v. 11, n. 1, p. 1, doi. 10.1186/1472-6807-11-1

By:

Marathe, Arvind;
Bansal, Manju

Publication type:

Article