Works matching IS 14712164 AND DT 2025 AND VI 26

Results: 717

Identification, characterization and expression analysis of the CDPK family in kelp Saccharina japonica.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11928-9

By:

Sun, Minghui;
Gai, Zihan;
Zhou, Xiufeng;
Yi, Cailing;
Zhang, Linan

Publication type:

Article

Genomic adaptations of Vibrio campbellii to thermal and salinity stress: insights into marine pathogen resilience in a changing ocean.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11908-z

By:

Pattano, Jiranan;
Dechathai, Thitaporn;
Chaichanit, Netnapa;
Surachat, Komwit;
Jetwanna, Korakot Wichitsa-nguan;
Srinitiwarawong, Kanchana;
Mittraparp-arthorn, Pimonsri

Publication type:

Article

Fire ant ovary gene expression analyses revealed immune and insulin pathways underlie the reproductive transition from virgin to mated queen.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11900-7

By:

Ferreira, Tainá N.;
Chen, Mei-Er;
Saelao, Perot;
Tamborindeguy, Cecilia;
Pietrantonio, Patricia V.

Publication type:

Article

Whole genome resequencing reveals genetic diversity, population structure, and selection signatures in local duck breeds.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11782-9

By:

Ren, Pengwei;
Peng, Yongdong;
Yang, Liu;
Khan, Muhammad Zahoor;
Jing, Yadi;
Qi, Chao;
Liu, Zhansheng;
Zhang, Shuer;
Zheng, Nenzhu;
Zhang, Meixia;
Liu, Xiang;
Zhu, Zhiming;
Zhu, Mingxia

Publication type:

Article

Transcriptomic analysis of the interactions between Fibrobacter succinogenes S85, Selenomonas ruminantium PC18 and a live yeast strain used as a ruminant feed additive.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11894-2

By:

Desvignes, Pauline;
Ruiz, Philippe;
Guillot, Laurie;
Danon, Jeanne;
Durand, Alexandra;
Beaumont, Martin;
Chaucheyras-Durand, Frédérique;
Forano, Evelyne

Publication type:

Article

Comparative genomics uncovers organellar genome structural divergence in Caryophyllales and reveals widespread non-coding transcription in Bougainvillea glabra organellar.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11891-5

By:

Zhang, Shuo;
Chang, Shengxin;
Lin, Xinge;
Xu, Shisong;
Leng, Qingyun;
Li, Haiyan;
López, Hernán Ariel;
Yin, Junmei;
Wu, Zhiqiang;
Niu, Junhai

Publication type:

Article

Bta-novel-miR-25336 enhanced adipose differentiation and unsaturated fatty acid synthesis by targeting ACADS in intramuscular adipocytes of river buffalo.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11883-5

By:

Zhu, Ruirui;
Zou, Fangfang;
Tian, Hao;
Mo, Hongfang;
Chen, Qilin;
Zeng, Xinyu;
Han, Shan;
Shi, Deshun;
Shang, Jianghua;
Huang, Jieping

Publication type:

Article

The effects of formula milk on development, nutrient absorption, and immune characteristics of piglets.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11909-y

By:

Tang, Chuang;
Liu, Zhengjiang;
Lu, Lu;
Zeng, Bo;
Li, Zhi;
Yang, Ruohan;
Zhang, Duoduo;
Fan, Xiaolan;
Cao, Jiaxue;
Li, Haohuan;
Sun, Jing;
Zhang, Jinwei;
Wei, Xiaoyuan;
Sun, Wei;
Ge, Liangpeng;
Li, Mingzhou;
Kong, Fanli

Publication type:

Article

BvHP4b gene in red beet promotes tuber enlargement and enhances resistance to Pst DC3000.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11864-8

By:

Xing, Xiaozheng;
Tian, Zengyuan;
Yang, Shuran;
Wang, Xiaomin;
Xing, Zhiyang;
Wu, Di;
Zheng, Shuting;
Guo, Yuqi

Publication type:

Article

Identification of the putative regulatory regions and candidate genes associated with backfat thickness and intramuscular fat content traits in Xiang pigs.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11860-y

By:

Chen, Xia;
Zheng, Yundi;
Hu, Fengbin;
Liu, Xiaoli;
Wang, Wei;
Qi, Fenfang;
Niu, Xi;
Huang, Shihui;
Wang, Jiafu;
Ran, Xueqin

Publication type:

Article

Correction: Genome-wide identification and expression analysis of the HvGATA gene family under abiotic stresses in barley (Hordeum vulgare L.)

Published in:

2025

By:

Zhao, Yan;
Yin, Chengxin;
Xing, Ruixi;
Zeng, Jianbin;
Dai, Xuehuan;
Xu, Dengan;
Liu, Wenxing;
Ma, Wujun

Publication type:

Correction Notice

Transcriptomic analysis of the interactions between Fibrobacter succinogenes S85, Selenomonas ruminantium PC18 and a live yeast strain used as a ruminant feed additive.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11894-2

By:

Desvignes, Pauline;
Ruiz, Philippe;
Guillot, Laurie;
Danon, Jeanne;
Durand, Alexandra;
Beaumont, Martin;
Chaucheyras-Durand, Frédérique;
Forano, Evelyne

Publication type:

Article

Comparative genomics uncovers organellar genome structural divergence in Caryophyllales and reveals widespread non-coding transcription in Bougainvillea glabra organellar.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11891-5

By:

Zhang, Shuo;
Chang, Shengxin;
Lin, Xinge;
Xu, Shisong;
Leng, Qingyun;
Li, Haiyan;
López, Hernán Ariel;
Yin, Junmei;
Wu, Zhiqiang;
Niu, Junhai

Publication type:

Article

Bta-novel-miR-25336 enhanced adipose differentiation and unsaturated fatty acid synthesis by targeting ACADS in intramuscular adipocytes of river buffalo.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11883-5

By:

Zhu, Ruirui;
Zou, Fangfang;
Tian, Hao;
Mo, Hongfang;
Chen, Qilin;
Zeng, Xinyu;
Han, Shan;
Shi, Deshun;
Shang, Jianghua;
Huang, Jieping

Publication type:

Article

PGBTR: a powerful and general method for inferring bacterial transcriptional regulatory networks.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11863-9

By:

Gu, Wei-Cheng;
Ma, Bin-Guang

Publication type:

Article

Investigating fungal diversity through metabarcoding for environmental samples: assessment of ITS1 and ITS2 Illumina sequencing using multiple defined mock communities with different classification methods and reference databases.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11917-y

By:

Winand, Raf;
D'hooge, Elizabet;
Van Uffelen, Alexander;
Bogaerts, Bert;
Van Braekel, Julien;
Hoffman, Stefan;
Roosens, Nancy H. C. J.;
Becker, Pierre;
De Keersmaecker, Sigrid C. J.;
Vanneste, Kevin

Publication type:

Article

Molecular mechanism of nano-vitamin A-mediated regulation of intramuscular fat deposition involving noncoding RNAs in pigs.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11898-y

By:

Li, Meng;
Cai, Wenrun;
Li, Ruotong;
Zhao, Wenye;
Zhang, Jiaxin;
Rong, Xiaoyin;
Zhang, Ting;
Yang, Yang;
Li, Bugao;
Guo, Xiaohong

Publication type:

Article

De Novo assembly and characterization of Aria alnifolia Chloroplast and mitochondrial genomes reveal homologous conformational changes mediated by repeat regions and gene transfer.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11892-4

By:

Ha, Young-Ho;
Cho, Ara;
Kim, Tae-Hee;
Gil, Hee-Young

Publication type:

Article

Determination of high-confidence germline genetic variants in next-generation sequencing through machine learning models: an approach to reduce the burden of orthogonal confirmation.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11889-z

By:

Yan, Muqing;
Zeng, Qiandong;
Zhang, Zhenxi;
Okamoto, Patricia;
Letovsky, Stanley;
Kenyon, Angela;
Leach, Natalia;
Reiner, Jennifer

Publication type:

Article

Characterization and comparative analysis of the complete mitochondrial genome of Phlomoides rotata, a traditional Tibetan medicinal plant.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11871-9

By:

Liu, Houzhou;
Tian, Zhongqiong;
Danzin, Tsering;
Tan, Xin;
Wang, Junwei;
La, Qiong;
Li, Wei

Publication type:

Article

Genome-wide study and expression analysis of soybean ERF transcription factors and overexpression of GmERF205 enhances drought resistance in soybean.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11829-x

By:

Wu, Nan;
Feng, Yongqi;
Jiang, Tao;
Li, Zhaobo;
Liu, Yulan;
Yuan, Minghao

Publication type:

Article

Multi-omics insights into functional alterations of the liver in growth-retarded offspring: transcriptomic, epigenetic and metabolomic profiles.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11896-0

By:

Lan, Qun;
Liufu, Sui;
Xu, Xin;
Chen, Bohe;
Chen, Wenwu;
Wang, Kaiming;
Liu, Caihong;
Xiao, Lanlin;
Liu, Xiaolin;
Yi, Lei;
Liu, Jingwen;
Deng, Qiuchun;
Ma, Haiming;
Kang, Meng

Publication type:

Article

A Candidatus liberibacter Asiaticus effector, CLIBASIA_00185 controls sugar metabolism, phenylpropanoid biosynthesis, and endocytosis pathway in Citrus sinensis.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11922-1

By:

Zhang, Shushe;
Lu, Yaobin;
He, Jun;
Zhou, Changyong;
Wang, Xuefeng

Publication type:

Article

Identification of yield-related QTLs and their applications using DH population in maize.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11920-3

By:

Wang, Yifei;
Yao, Dongxu;
Song, Junfeng;
Zhang, Xiaochun;
Zhu, Yanbin;
Luo, Zhichun;
Lai, Jinsheng;
Song, Weibin;
Yang, Tianxia

Publication type:

Article

Genome-wide association study of blood vitamin D metabolites and bone remodelling markers in pigs.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11914-1

By:

Paul, Dipanwita;
Oster, Michael;
Ponsuksili, Siriluck;
Wimmers, Klaus;
Reyer, Henry

Publication type:

Article

Molecular mechanism of nano-vitamin A-mediated regulation of intramuscular fat deposition involving noncoding RNAs in pigs.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11898-y

By:

Li, Meng;
Cai, Wenrun;
Li, Ruotong;
Zhao, Wenye;
Zhang, Jiaxin;
Rong, Xiaoyin;
Zhang, Ting;
Yang, Yang;
Li, Bugao;
Guo, Xiaohong

Publication type:

Article

Mitochondrial genome of Bactrocera fruit flies (Tephritidae: Dacini): features, structure, and significance for diagnosis.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11872-8

By:

Castellanos, Nathaly Lara;
Gunawardana, Disna N.;
McCarthy, Bede;
Sathish, Puthigae;
George, Sherly;
Li, Dongmei

Publication type:

Article

Correction: Cross-tissue gene expression interactions from bulk, single cell and spatial transcriptomics with crossWGCNA.

Published in:

2025

By:

Savino, Aurora;
Iannuzzi, Rafaele M.;
Avalle, Lidia;
Lobascio, Andrea;
Iorio, Francesco;
Provero, Paolo;
Poli, Valeria

Publication type:

Correction Notice

Unsupervised evaluation of pre-trained DNA language model embeddings.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11913-2

By:

Awasthi, Raghav;
Mend Mend Arachchige, Gayan Samuditha;
Zhu, Xiaofeng

Publication type:

Article

Proteome study of dikaryotic and monokaryotic mycelia reveals the transfer between biological processes contributing to dikaryon growth advantage of the medicinal fungus Ganoderma lucidum.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11905-2

By:

Yu, Huatao;
Dong, Linlin;
Zhao, Qinghe

Publication type:

Article

Dysregulated proliferation and immune response induced by estrogen in Egr1 knockout uterus are similar to those in immature uterus.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11904-3

By:

Jo, Gae Hoon;
Song, Haengseok;
Hwang, Sohyun

Publication type:

Article

Genome-wide identification and expression pattern analysis of NAC family in Taxus yunnanensis and the TyuNAC30 role in paclitaxel production.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11916-z

By:

Fan, Jiangtao;
Wang, Yong;
Dou, Mengke;
Hu, Qiuhong;
Li, Qing;
Gan, Shengmei;
Jing, Mingwei;
Wang, Gang;
Huang, Xiong

Publication type:

Article

Genomic characterization and global relatedness of multidrug-resistant Salmonella Goldcoast ST2529.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11903-4

By:

Mao, Weifang;
Jin, Faxiang;
Wang, Yanan;
Zhao, Jinyun;
Xu, Peng;
Yu, Yefu;
He, Xianhong;
Shao, Jiayu;
Bao, Danni;
Xu, Wenfang

Publication type:

Article

LMOD2 interaction with ACTC1 regulates myogenic differentiation.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11897-z

By:

Wang, Kaiming;
Liu, Caihong;
Yi, Lei;
Liufu, Sui;
Chen, Wenwu;
Liu, Xiaolin;
Chen, Bohe;
Xu, Xin;
Liu, Jingwen;
Liu, Xibing;
Yin, Yulong;
Ma, Haiming

Publication type:

Article

Transcriptome analysis unveils multiple reasons behind delayed and slower deposition of intramuscular fat compared to subcutaneous fat in cattle.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11890-6

By:

Tan, Zhendong;
Pokhrel, Binod;
Zhou, Ziqi;
Jiang, Honglin

Publication type:

Article

Integrated analysis of microRNA and mRNA interactions regulating fecundity in the ovaries of two distinct sheep breeds.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11408-0

By:

Yousuf, Salsabeel;
Malik, Waqar Afzal;
Feng, Hui;
Liu, Tianyi;
Xie, Lingli;
Miao, Xiangyang

Publication type:

Article

Functional divergence and characterization of the HOTHEAD gene family in rice.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11901-6

By:

Liu, Jialin;
Ye, Qing;
Shen, Yaqi;
Wu, Zheng;
Jiang, Wenxiang;
Guo, Dandan;
Hu, Xiafei;
Wang, Xiaoqing;
Zhang, Zelin;
Hu, Lifang

Publication type:

Article

Candidate imprinting control regions in dog genome.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11801-9

By:

Wyss, Phillip;
Bina, Minou

Publication type:

Article

The complete plastome of the Antarctic moss Andreaea regularis (Andreaeaceae) and its comparative analyses within Bryophyta.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11854-w

By:

Sulaiman, Syahril;
Lee, Hyodong;
Min, Kyungwon;
Lee, Jungeun;
Yoon, Young-Jun;
Lee, Jun Hyuck;
Lee, Hyoungseok

Publication type:

Article

Genome-wide association analysis revealed novel candidate genes for body measurement traits in indigenous Gudali and crossbred Simgud in Cameroon.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11865-7

By:

Matenchi, Youchahou Poutougnigni;
Bastanlar, Evren Koban;
Hegarty, Matthew

Publication type:

Article

Correction: Mapping-based genome size Estimation.

Published in:

2025

By:

Natarajan, Shakunthala;
Gehrke, Jessica;
Pucker, Boas

Publication type:

Correction Notice

Cell line authentication using optical genome mapping.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11799-0

By:

Chialastri, Alex;
Flowers, Kevin;
Cogburn, L Amarin;
Fink, Damien;
Dashnau, Jennifer L.

Publication type:

Article

A genome resource for the marine annelid Platynereis spp.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11727-2

By:

Mutemi, Kevin Nzumbi;
Simakov, Oleg;
Pan, Leslie;
Santangeli, Luca;
Null, Ryan Wesley;
Handberg-Thorsager, Mette;
Vellutini, Bruno Cossermelli;
Peterson, Kevin J.;
Fromm, Bastian;
Larsson, Tomas;
Savage, Emily;
Lopez, Mireia Osuna;
Hercog, Rajna;
Provaznik, Jan;
Ordoñez-Rueda, Diana;
Azevedo, Nayara;
Gazave, Eve;
Vervoort, Michel;
Tomancak, Pavel;
Tan, Wenhua

Publication type:

Article

Expression pattern changes of three homeologs in chemokine activity enhance antiviral response to herpesvirus infection in a newly synthesized alloheptaploid.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11838-w

By:

Yang, Xiao-Li;
Wang, Yang;
Li, Zhi;
Lin, Qiao-Hong;
Yu, Peng;
Lu, Meng;
Li, Xi-Yin;
Wang, Zhong-Wei;
Zhang, Xiao-Juan;
Gui, Jian-Fang;
Zhou, Li

Publication type:

Article

Antennal RNAseq reveals odorant receptors with sex-biased expression in the common eastern firefly, Photinus pyralis.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11758-9

By:

Lower, Sarah E.;
Pring, Samuel;
Tran, Hanh;
Martinson, Katherine;
Deering, Susan;
Price, Mathew A.;
Vestal, Brian;
Pask, Gregory M.;
Collins, Douglas B.;
Mitchell, Robert F.

Publication type:

Article

Comparative genomics analysis of Bacillus altitudinis G03 provides insights into its biocontrol and probiotic traits.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11842-0

By:

Chen, Dongli;
Lin, Jie;
Yan, Yongen;
Pi, Jiang;
Xu, Jun-Fa;
Chen, Lingming

Publication type:

Article

Mobile genetic elements mediating antimicrobial resistance drive the evolutionary process of Clostridioides difficile ST37/RT017.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11822-4

By:

Lv, Tao;
Bi, Xiajing;
Zheng, Lisi;
Zhao, Yuhong;
Zhou, Yizheng;
Wu, Tao;
Shen, Ping;
Zhu, Danhua;
Chen, Shiyao;
Chen, Yunbo

Publication type:

Article

Identity by descent and local ancestry mapping of HCV spontaneous clearance in populations of diverse ancestries.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-024-11076-6

By:

Yu, Zixuan;
Abdel-Azim, Salma;
Duggal, Priya;
Vergara, Candelaria

Publication type:

Article

Comparative genome-wide characterization and evolutionary insights into the AP2/ERF gene family in three Coffea species (C. canephora, C. eugenioides, and C. arabica)

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11850-0

By:

Park, Sunchung;
Ahn, Ezekiel;
Zhang, Dapeng;
Meinhardt, Lyndel W.

Publication type:

Article

Identification and expression pattern analysis of the C2H2 family in the whole genome of Agaricus bisporus.

Published in:

BMC Genomics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12864-025-11812-6

By:

Tao, Mengjiao;
Han, Yanqi;
Liu, Songhan;
Zhang, Xin;
Ye, Liyun;
Li, Nanyi

Publication type:

Article