Works matching IS 14712164 AND DT 2024

Results: 1157

Transcriptional regulation of hormone signalling genes in black pepper in response to Phytophthora capsici.

Published in:

BMC Genomics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12864-024-10802-4

By:

Mahadevan, Chidambareswaren;
Shafi, K. Mohamed;
Nagarathnam, B;
Sakuntala, Manjula;
Sowdhamini, Ramanathan

Publication type:

Article

Characterization of sequence variations in the extended flanking regions using massively parallel sequencing in 21 A-STRs and 21 Y-STRs.

Published in:

BMC Genomics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12864-024-10762-9

By:

Li, Hui;
Li, Beixu;
Liu, Yanan;
Yang, Fan;
Cao, Yu;
Xie, Jianhui;
Liu, Xiling;
Zhao, Zhenmin;
Li, Chengtao

Publication type:

Article

Microalgae and phytase dietary supplementation improved growth and gut microbiota in juvenile European seabass (Dicentrarchus labrax).

Published in:

BMC Genomics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12864-024-10760-x

By:

Peralta-Sánchez, Juan Manuel;
Rabelo-Ruiz, Miguel;
Martín-Platero, Antonio Manuel;
Vizcaíno, Antonio Jesús;
Flores-Moreno, Sara;
Macías-Vidal, Judit;
Martos-Sitcha, Juan Antonio;
Alarcón-López, Francisco Javier;
Baños, Alberto;
Valdivia, Eva;
Martínez-Bueno, Manuel

Publication type:

Article

Complete genome sequence analysis of Pestalotiopsis microspora, a fungal pathogen causing kiwifruit postharvest rots.

Published in:

BMC Genomics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12864-024-10751-y

By:

Deng, Lei;
Qiu, Xufang;
Su, Qiya;
Pan, Hui;
Wang, Zupeng;
Qian, Guoliang;
Liu, Pu;
Liu, Dejiang;
Zhang, Xiujun;
Zhong, Caihong;
Li, Li

Publication type:

Article

A transcriptome-wide analysis provides novel insights into how Metabacillus indicus promotes coral larvae metamorphosis and settlement.

Published in:

BMC Genomics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12864-024-10742-z

By:

Zhang, Yanying;
Zhang, Ying;
Tang, Xiaoyu;
Guo, Xiangrui;
Yang, Qingsong;
Sun, Hao;
Wang, Hanzhang;
Ling, Juan;
Dong, Junde

Publication type:

Article

Correction: Analysis of alcohol-metabolizing enzymes genetic variants and RAR/RXR expression in patients diagnosed with fetal alcohol syndrome: a case-control study.

Published in:

2024

By:

Vieiros, Melina;
Navarro-Tapia, Elisabet;
Ramos-Triguero, Anna;
García-Meseguer, Àgueda;
Martínez, Leopoldo;
García-Algar, Óscar;
Andreu-Fernández, Vicente

Publication type:

Correction Notice

Genome-wide survey of KT/HAK/KUP genes in the genus Citrullus and analysis of their involvement in K<sup>+</sup>-deficiency and drought stress responses in between C. lanatus and C. amarus.

Published in:

BMC Genomics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12864-024-10712-5

By:

Cheng, Rui;
Zhao, Zhengxiang;
Tang, Yan;
Gu, Yan;
Chen, Guodong;
Sun, Yudong;
Wang, Xuezheng

Publication type:

Article

Novel insights into the pleiotropic health effects of growth differentiation factor 11 gained from genome-wide association studies in population biobanks.

Published in:

BMC Genomics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12864-024-10710-7

By:

Strosahl, Jessica;
Ye, Kaixiong;
Pazdro, Robert

Publication type:

Article

A putative scenario of how de novo protein-coding genes originate in the Saccharomyces cerevisiae lineage.

Published in:

BMC Genomics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12864-024-10669-5

By:

Yada, Tetsushi;
Taniguchi, Takeaki

Publication type:

Article

Transcriptome analysis reveals miRNA expression profiles in hypothalamus tissues during the sexual development of Jining grey goats.

Published in:

BMC Genomics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12864-024-10735-y

By:

Li, Qing;
Chao, Tianle;
Wang, Yanyan;
Xuan, Rong;
Guo, Yanfei;
He, Peipei;
Zhang, Lu;
Wang, Jianmin

Publication type:

Article

Transcriptome analysis and genome-wide identification of the dehydration-responsive element binding gene family in jackfruit under cold stress.

Published in:

BMC Genomics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12864-024-10732-1

By:

Ma, Xiangwei;
Zhu, Pengjin;
Du, Yingjun;
Song, Qiqi;
Ye, Weiyan;
Tang, Xiuguan;
He, Jiang;
Zhong, Yunjie;
Ou, Jingli;
Pang, Xinhua

Publication type:

Article

Correction: Comparing methylation levels assayed in GCrich regions with current and emerging methods.

Published in:

2024

By:

Guanzon, Dominic;
Ross, Jason P.;
Ma, Chenkai;
Berry, Oliver;
Liew, Yi Jin

Publication type:

Correction Notice

Comparative transcriptome analysis reveals defense responses against soft rot induced by Pectobacterium aroidearum and Pectobacterium carotovorum in Pinellia ternata.

Published in:

BMC Genomics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12864-024-10746-9

By:

Luo, Ming;
Wang, Mingxing;
Xu, Jiawei;
Qu, Kaili;
Miao, Yuhuan;
Liu, Dahui

Publication type:

Article

Benchmarking UMI-aware and standard variant callers for low frequency ctDNA variant detection.

Published in:

BMC Genomics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12864-024-10737-w

By:

Maruzani, Rugare;
Brierley, Liam;
Jorgensen, Andrea;
Fowler, Anna

Publication type:

Article

Predicting splicing patterns from the transcription factor binding sites in the promoter with deep learning.

Published in:

BMC Genomics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12864-024-10667-7

By:

Lin, Tzu-Chieh;
Tsai, Cheng-Hung;
Shiau, Cheng-Kai;
Huang, Jia-Hsin;
Tsai, Huai-Kuang

Publication type:

Article

Understanding the molecular regulation of flavonoid 3'-hydroxylase in anthocyanin synthesis: insights from purple qingke.

Published in:

BMC Genomics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12864-024-10738-9

By:

Chen, Lupeng;
Yao, Youhua;
Cui, Yongmei;
Li, Xin;
An, Likun;
Bai, Yixiong;
Yao, Xiaohua;
Wu, Kunlun

Publication type:

Article

Whole-transcriptome sequencing analysis to identify key circRNAs, miRNAs, and mRNAs in the development of yak testes.

Published in:

BMC Genomics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12864-024-10716-1

By:

Hu, Liyan;
Wang, Xingdong;
Guo, Shaoke;
Cao, Mengli;
Kang, Yandong;
Ding, Ziqiang;
Pei, Jie;
Ge, Qianyun;
Ma, Yi;
Guo, Xian

Publication type:

Article

Recombination fraction in pre-recombinant inbred lines (PRERIL) - revisiting a century old problem in genetics.

Published in:

BMC Genomics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12864-024-10699-z

By:

Xu, Shizhong;
Osorio y Fortéa, José

Publication type:

Article

Proteomic networks and related genetic variants associated with smoking and chronic obstructive pulmonary disease.

Published in:

BMC Genomics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12864-024-10619-1

By:

Konigsberg, Iain R;
Vu, Thao;
Liu, Weixuan;
Litkowski, Elizabeth M;
Pratte, Katherine A;
Vargas, Luciana B;
Gilmore, Niles;
Abdel-Hafiz, Mohamed;
Manichaikul, Ani;
Cho, Michael H;
Hersh, Craig P;
DeMeo, Dawn L;
Banaei-Kashani, Farnoush;
Bowler, Russell P;
Lange, Leslie A;
Kechris, Katerina J

Publication type:

Article

Transcriptome analysis reveals high concentration of resveratrol promotes lipid synthesis and induces apoptosis in Siberian sturgeon (Acipenser baerii).

Published in:

BMC Genomics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12864-024-10698-0

By:

Yang, Shiyong;
Yan, Chaozhan;
Pang, Xiaojian;
Shao, Wuyuntana;
Xu, Zihan;
Li, Datian;
Xu, Wenqiang;
Zhang, Zhehua;
Su, Boru;
Li, Yunkun;
Wu, Jiayun;
Huang, Xiaoli;
Luo, Wei;
Du, Xiaogang

Publication type:

Article

Genome-wide investigation of the nuclear factor Y gene family in Ginger (Zingiber officinale Roscoe): evolution and expression profiling during development and abiotic stresses.

Published in:

BMC Genomics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12864-024-10588-5

By:

Li, Hong-Lei;
Wu, Xiaoli;
Gong, Min;
Xia, Maoqin;
Zhang, Wenlin;
Chen, Zhiduan;
Xing, Hai-Tao

Publication type:

Article

Influence of selection on the probability of fixation at a locus with multiple alleles.

Published in:

BMC Genomics, 2024, v. 25, n. 3, p. 1, doi. 10.1186/s12864-024-10733-0

By:

Overall, A. D. J.;
Waxman, D.

Publication type:

Article

A comparative analysis of ENCODE and Cistrome in the context of TF binding signal.

Published in:

BMC Genomics, 2024, v. 25, n. 3, p. 1, doi. 10.1186/s12864-024-10668-6

By:

Perna, Stefano;
Pinoli, Pietro;
Ceri, Stefano;
Wong, Limsoon

Publication type:

Article

Dissecting the invasion history of Spotted-Wing Drosophila (Drosophila suzukii) in Portugal using genomic data.

Published in:

BMC Genomics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12864-024-10739-8

By:

Sario, Sara;
Marques, João P.;
Farelo, Liliana;
Afonso, Sandra;
Santos, Conceição;
Melo-Ferreira, José

Publication type:

Article

HASCH - A high-throughput amplicon-based SNP-platform for medicinal cannabis and industrial hemp genotyping applications.

Published in:

BMC Genomics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12864-024-10734-z

By:

Mansueto, Locedie;
Tandayu, Erwin;
Mieog, Jos;
Garcia-de Heer, Lennard;
Das, Rekhamani;
Burn, Adam;
Mauleon, Ramil;
Kretzschmar, Tobias

Publication type:

Article

Discovery of NRG1-VII: the myeloid-derived class of NRG1.

Published in:

BMC Genomics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12864-024-10723-2

By:

Berrocal-Rubio, Miguel A;
Pawer, Yair David Joseph;
Dinevska, Marija;
De Paoli-Iseppi, Ricardo;
Widodo, Samuel S.;
Gleeson, Josie;
Rajab, Nadia;
De Nardo, Will;
Hallab, Jeannette;
Li, Anran;
Mantamadiotis, Theo;
Clark, Michael B.;
Wells, Christine A.

Publication type:

Article

Genome-wide characterization of DELLA gene family in blueberry (Vaccinium darrowii) and their expression profiles in development and response to abiotic stress.

Published in:

BMC Genomics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12864-024-10721-4

By:

Zhou, Houjun;
Wang, Yanwen;
Wang, Xinyu;
Cheng, Rui;
Zhang, Hongxia;
Yang, Lei

Publication type:

Article

Genome-wide characterization and expression analysis of the CINNAMYL ALCOHOL DEHYDROGENASE gene family in Triticum aestivum.

Published in:

BMC Genomics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12864-024-10648-w

By:

Peracchi, Luigi M.;
Brew-Appiah, Rhoda A.T.;
Garland-Campbell, Kimberly;
Roalson, Eric H.;
Sanguinet, Karen A.

Publication type:

Article

Whole genome sequence and characterisation of Streptococcus suis 3112, isolated from snakeskin gourami, Trichopodus pectoralis.

Published in:

BMC Genomics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12864-024-10736-x

By:

Aiewsakun, Pakorn;
Ruangchai, Wuthiwat;
Jaemsai, Bharkbhoom;
Bodharamik, Thavin;
Meemetta, Watcharachai;
Senapin, Saengchan

Publication type:

Article

Cell-specific AHR-driven differential gene expression in the mouse liver cell following acute TCDD exposure.

Published in:

BMC Genomics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12864-024-10730-3

By:

Cholico, Giovan N.;
Nault, Rance;
Zacharewski, Tim

Publication type:

Article

Association of mutations in Mycobacterium tuberculosis complex (MTBC) respiration chain genes with hyper-transmission.

Published in:

BMC Genomics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12864-024-10726-z

By:

Li, Yameng;
Li, Yifan;
Liu, Yao;
Kong, Xianglong;
Tao, Ningning;
Hou, Yawei;
Wang, Tingting;
Han, Qilin;
Zhang, Yuzhen;
Long, Fei;
Li, Huaichen

Publication type:

Article

Sticking together: independent evolution of biofilm formation in different species of staphylococci has occurred multiple times via different pathways.

Published in:

BMC Genomics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12864-024-10719-y

By:

Crossman, Lisa;
Sims, Leanne;
Dean, Rachael;
Felgate, Heather;
Calvo, Teresa Diaz;
Hill, Claire;
McNamara, Iain;
Webber, Mark A.;
Wain, John

Publication type:

Article

Discovery and demonstration of the temperature stress response functions of Dermatophagoides farinae proteins 1 and 2.

Published in:

BMC Genomics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12864-024-10715-2

By:

Zhang, Wanyu;
Niu, Dongling;
Zhao, Yae;
Hu, Li;
Guan, Chenglin;
Chai, Rong

Publication type:

Article

The somatic genome of Eptatretus okinoseanus reveals the adaptation to deep-sea oligotrophic environment.

Published in:

BMC Genomics, 2024, p. 1, doi. 10.1186/s12864-024-10727-y

By:

Shi, Mengke;
Li, Qi;
Wang, Yong;
He, Li-Sheng

Publication type:

Article

Tandem mass tag (TMT)-based quantitative proteomics analysis reveals the different responses of contrasting alfalfa varieties to drought stress.

Published in:

BMC Genomics, 2024, p. 1, doi. 10.1186/s12864-024-10702-7

By:

Quan, Wenli;
Liu, Xun

Publication type:

Article

A novel deletion in the BLOC1S6 Gene Associated with Hermansky-Pudlak syndrome type 9 (HPS-9).

Published in:

BMC Genomics, 2024, p. 1, doi. 10.1186/s12864-024-10478-w

By:

Kahani, Seyyed Mohammad;
Saray, Ali Rabbizadeh;
Kahaei, Mir Salar;
Dehghani, Ali;
Mohammadi, Pouria;
Garshasbi, Masoud

Publication type:

Article

Comparative genome-wide identification and characterization of SET domain-containing and JmjC domain-containing proteins in piroplasms.

Published in:

BMC Genomics, 2024, v. 25, p. 1, doi. 10.1186/s12864-024-10731-2

By:

Liang, Qindong;
Zhang, Shangdi;
Liu, Zeen;
Wang, Jinming;
Yin, Hong;
Guan, Guiquan;
You, Chongge

Publication type:

Article

lncRNAs involved in the Shade Avoidance Syndrome (SAS) in Arabidopsis thaliana.

Published in:

BMC Genomics, 2024, v. 25, p. 1, doi. 10.1186/s12864-024-10718-z

By:

García-López, Irving Jair;
Vélez-Ramírez, Aarón I.;
Gillmor, C. Stewart;
Fernandez-Valverde, Selene L.

Publication type:

Article

Adaptive evolution of A-to-I auto-editing site in Adar of eusocial insects.

Published in:

BMC Genomics, 2024, v. 25, p. 1, doi. 10.1186/s12864-024-10709-0

By:

Zheng, Caiqing;
Liu, Jiyao;
Duan, Yuange

Publication type:

Article

Analyzing RNA-Seq data from Chlamydia with super broad transcriptomic activation: challenges, solutions, and implications for other systems.

Published in:

BMC Genomics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12864-024-10714-3

By:

Wan, Danny;
Cheng, Andrew;
Wang, Yuxuan;
Zhong, Guangming;
Li, Wei Vivian;
Fan, Huizhou

Publication type:

Article

Genome-wide identification of Gα family in grass carp (Ctenopharyngodon idella) and reproductive regulation functional characteristics of Cignaq.

Published in:

BMC Genomics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12864-024-10717-0

By:

Wang, Chong;
Xiong, Shuting;
Hu, Shitao;
Yang, Le;
Huang, Yuhong;
Chen, Haitai;
Xu, Baohong;
Xiao, Tiaoyi;
Liu, Qiaolin

Publication type:

Article

Identification of candidate genes associated with double flowers via integrating BSA-seq and RNA-seq in Brassica napus.

Published in:

BMC Genomics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12864-024-10708-1

By:

Ma, Xiaowei;
Fan, Liangmiao;
Ye, Shenhua;
Chen, Yanping;
Huang, Yingying;
Wu, Lumei;
Zhao, Lun;
Yi, Bin;
Ma, Chaozhi;
Tu, Jinxing;
Shen, Jinxiong;
Fu, Tingdong;
Wen, Jing

Publication type:

Article

Knockout of the WD40 domain of ATG16L1 enhances foot and mouth disease virus replication.

Published in:

BMC Genomics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12864-024-10703-6

By:

Wu, Xiuping;
Yang, Yang;
Ru, Yi;
Hao, Rongzeng;
Zhao, Dongmei;
Ren, Ruifang;
Lu, Bingzhou;
Li, Yajun;
Sun, Shengzhen;
Zheng, Haixue;
Wang, Wenhui

Publication type:

Article

Genome-wide identification of R2R3-MYB transcription factor subfamily genes involved in salt stress in rice (Oryza sativa L.).

Published in:

BMC Genomics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12864-024-10693-5

By:

Zhang, Hao-Cheng;
Gong, Yuan-Hang;
Tao, Tao;
Lu, Shuai;
Zhou, Wen-Yu;
Xia, Han;
Zhang, Xin-Yi;
Yang, Qing-Qing;
Zhang, Ming-Qiu;
Hong, Lian-Min;
Guo, Qian-Qian;
Ren, Xin-Zhe;
Yang, Zhi-Di;
Cai, Xiu-Ling;
Ren, De-Yong;
Gao, Ji-Ping;
Jin, Su-Kui;
Leng, Yu-Jia

Publication type:

Article

A novel method for cell deconvolution using DNA methylation in PCA space.

Published in:

BMC Genomics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12864-024-10652-0

By:

Xu, Huan;
Zhang, Ge;
Chen, Jing

Publication type:

Article

Molecular characterization of PSEUDO RESPONSE REGULATOR family in Rosaceae and function of PbPRR59a and PbPRR59b in flowering regulation.

Published in:

BMC Genomics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12864-024-10720-5

By:

Liu, Zhe;
Liu, Weijuan;
Wang, Zhangqing;
Xie, Zhihua;
Qi, Kaijie;
Yue, Dong;
Li, Yu;
Zhang, Shaoling;
Wu, Juyou;
Wang, Peng

Publication type:

Article

Chromosomal-level genome assembly of Hylurgus ligniperda: insights into host adaptation and environmental tolerance.

Published in:

BMC Genomics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12864-024-10711-6

By:

Chen, Zhiqian;
Ren, Lili;
Li, Jiaxing;
Fu, Ningning;
Yun, Quanzheng;
Luo, Youqing

Publication type:

Article

Ethanol-related transcriptomic changes in mouse testes.

Published in:

BMC Genomics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12864-024-10696-2

By:

Han, Gwidong;
Lee, Seung Jae;
Hong, Seung Pyo;
Song, Jaeho;
Cho, Chunghee

Publication type:

Article

Exploring the Sublethal Impacts of Cu and Zn on Daphnia magna: a transcriptomic perspective.

Published in:

BMC Genomics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12864-024-10701-8

By:

Paylar, Berkay;
Bezabhe, Yared H.;
Jass, Jana;
Olsson, Per-Erik

Publication type:

Article

Sequencing by binding rivals SMOR error-corrected sequencing by synthesis technology for accurate detection and quantification of minor (< 0.1%) subpopulation variants.

Published in:

BMC Genomics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12864-024-10697-1

By:

Allender, Christopher J.;
Wike, Candice L.;
Porter, W. Tanner;
Ellis, Dean;
Lemmer, Darrin;
Pond, Stephanie J. K.;
Engelthaler, David M.

Publication type:

Article