Works matching IS 14712164 AND DT 2012 AND VI 13 AND IP Suppl 8

Results: 23

Identifying the status of genetic lesions in cancer clinical trial documents using machine learning.

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 8, p. 1, doi. 10.1186/1471-2164-13-S8-S21

By:

Yonghui Wu;
Levy, Mia A.;
Micheel, Christine M.;
Paul Yeh;
Buzhou Tang;
Cantrell, Michael J.;
Cooreman, Stacy M.;
Hua Xu

Publication type:

Article

Automatically clustering large-scale miRNA sequences: methods and experiments.

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 8, p. 1, doi. 10.1186/1471-2164-13-S8-S15

By:

Linxia Wan;
Jiandong Ding;
Ting Jin;
Jihong Guan;
Shuigeng Zhou

Publication type:

Article

A Bayesian decision fusion approach for microRNA target prediction.

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 8, p. 1, doi. 10.1186/1471-2164-13-S8-S13

By:

Dong Yue;
Maozu Guo;
Yidong Chen;
Yufei Huang

Publication type:

Article

Literature aided determination of data quality and statistical significance threshold for gene expression studies.

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 8, p. 1, doi. 10.1186/1471-2164-13-S8-S23

By:

Lijing Xu;
Cheng Cheng;
George, E Olusegun;
Homayouni, Ramin

Publication type:

Article

Differential combinatorial regulatory network analysis related to venous metastasis of hepatocellular carcinoma.

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 8, p. 1, doi. 10.1186/1471-2164-13-S8-S14

By:

Lingyao Zeng;
Jian Yu;
Tao Huang;
Huliang Jia;
Qiongzhu Dong;
Fei He;
Weilan Yuan;
Lunxiu Qin;
Yixue Li;
Lu Xie

Publication type:

Article

New methods for separating causes from effects in genomics data.

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 8, p. 1, doi. 10.1186/1471-2164-13-S8-S22

By:

Statnikov, Alexander;
Henaff, Mikael;
Lytkin, Nikita I.;
Aliferis, Constantin F.

Publication type:

Article

GLAD4U: deriving and prioritizing gene lists from PubMed literature.

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 8, p. 1, doi. 10.1186/1471-2164-13-S8-S20

By:

Bing Zhang;
Duncan, Dexter;
Zhiao Shi;
Jourquin, Jérôme

Publication type:

Article

Species-level classification of the vaginal microbiome.

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 8, p. 1, doi. 10.1186/1471-2164-13-S8-S17

By:

Fettweis, Jennifer M.;
Serrano, Myrna G.;
Sheth, Nihar U.;
Mayer, Carly M.;
Glascock, Abigail L.;
Brooks, J Paul;
Jefferson, Kimberly K.;
Buck, Gregory A.

Publication type:

Article

Detecting the borders between coding and noncoding DNA regions in prokaryotes based on recursive segmentation and nucleotide doublets statistics.

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 8, p. 1, doi. 10.1186/1471-2164-13-S8-S19

By:

Suping Deng;
Yixiang Shi;
Liyun Yuan;
Yixue Li;
Guohui Ding

Publication type:

Article

CTF: a CRF-based transcription factor binding sites finding system.

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 8, p. 1, doi. 10.1186/1471-2164-13-S8-S18

By:

Yupeng He;
Yizhe Zhang;
Guangyong Zheng;
Chaochun Wei

Publication type:

Article

Multi-species data integration and gene ranking enrich significant results in an alcoholism genome-wide association study.

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 8, p. 1, doi. 10.1186/1471-2164-13-S8-S16

By:

Zhongming Zhao;
An-Yuan Guo;
Van den Oord, Edwin JCG;
Aliev, Fazil;
Peilin Jia;
Edenberg, Howard J.;
Riley, Brien P.;
Dick, Danielle M.;
Bettinger, Jill C.;
Davies, Andrew G.;
Grotewiel, Michael S.;
Schuckit, Marc A.;
Agrawal, Arpana;
Kramer, John;
Nurnberger Jr, John I.;
Kendler, Kenneth S.;
Webb, Bradley T.;
Miles, Michael F.

Publication type:

Article

Combining multiple ChIP-seq peak detection systems using combinatorial fusion.

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 8, p. 1, doi. 10.1186/1471-2164-13-S8-S12

By:

Schweikert, Christina;
Brown, Stuart;
Tang, Zuojian;
Smith, Phillip R.;
Hsu, D Frank

Publication type:

Article

DFI: gene feature discovery in RNA-seq experiments from multiple sources.

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 8, p. 1, doi. 10.1186/1471-2164-13-S8-S11

By:

Ozer, Hatice Gulcin;
Parvin, Jeffrey D.;
Kun Huang

Publication type:

Article

Alt Event Finder: a tool for extracting alternative splicing events from RNA-seq data.

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 8, p. 1, doi. 10.1186/1471-2164-13-S8-S10

By:

Ao Zhou;
Breese, Marcus R.;
Yangyang Hao;
Edenberg, Howard J.;
Lang Li;
Skaar, Todd C.;
Yunlong Liu

Publication type:

Article

BM-Map: an efficient software package for accurately allocating multireads of RNA-sequencing data.

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 8, p. 1, doi. 10.1186/1471-2164-13-S8-S9

By:

Norris, Clift;
Yuan Yuan;
Kam-Wah Tsui;
Yanxun Xu;
Han Liang;
Yuan Ji

Publication type:

Article

Steps to ensure accuracy in genotype and SNP calling from Illumina sequencing data.

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 8, p. 1, doi. 10.1186/1471-2164-13-S8-S8

By:

Qi Liu;
Yan Guo;
Jiang Li;
Jirong Long;
Bing Zhang;
Yu Shyr

Publication type:

Article

Investigating the relationship of DNA methylation with mutation rate and allele frequency in the human genome.

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 8, p. 1, doi. 10.1186/1471-2164-13-S8-S7

By:

Junfeng Xia;
Leng Han;
Zhongming Zhao

Publication type:

Article

Enrichment-based DNA methylation analysis using next-generation sequencing: sample exclusion, estimating changes in global methylation, and the contribution of replicate lanes.

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 8, p. 1, doi. 10.1186/1471-2164-13-S8-S6

By:

Trimarchi, Michael P.;
Murphy, Mark;
Frankhouser, David;
Rodriguez, Benjamin A.T.;
Curfman, John;
Marcucci, Guido;
Yan, Pearlly;
Bundschuh, Ralf

Publication type:

Article

Redistribution of H3K4me2 on neural tissue specific genes during mouse brain development.

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 8, p. 1, doi. 10.1186/1471-2164-13-S8-S5

By:

Jie Zhang;
Parvin, Jeffrey;
Kun Huang

Publication type:

Article

Genomic sequence analysis and characterization of Sneathia amnii sp. nov.

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 8, p. 1, doi. 10.1186/1471-2164-13-S8-S4

By:

Harwich Jr, Michael D.;
Serrano, Myrna G.;
Fettweis, Jennifer M.;
Alves, João M.P.;
Reimers, Mark A.;
Buck, Gregory A.;
Jefferson, Kimberly K.

Publication type:

Article

Analysis of high-throughput RNAi screening data in identifying genes mediating sensitivity to chemotherapeutic drugs: statistical approaches and perspectives.

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 8, p. 1, doi. 10.1186/1471-2164-13-S8-S3

By:

Fei Ye;
Bauer, Joshua A.;
Pietenpol, Jennifer A.;
Yu Shyr

Publication type:

Article

Genomics in 2012: challenges and opportunities in the next generation sequencing era.

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 8, p. 1, doi. 10.1186/1471-2164-13-S8-S1

By:

Zhongming Zhao;
Yufei Huang;
Bing Zhang;
Yu Shyr;
Hua Xu

Publication type:

Article

RNA-Seq analysis implicates dysregulation of the immune system in schizophrenia.

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 8, p. 1, doi. 10.1186/1471-2164-13-S8-S2

By:

Junzhe Xu;
Jingchun Sun;
Jingchun Chen;
Lily Wang;
Anna Li;
Helm, Matthew;
Dubovsky, Steven L.;
Bacanu, Silviu-Alin;
Zhongming Zhao;
Xiangning Chen

Publication type:

Article