Works matching IS 14712164 AND DT 2012 AND VI 13 AND IP Suppl 7

Results: 29

Comparison and evaluation of pathway-level aggregation methods of gene expression data.

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 7, p. 1, doi. 10.1186/1471-2164-13-S7-S26

By:

Seungwoo Hwang

Publication type:

Article

Metagenomic profiles of free-living archaea, bacteria and small eukaryotes in coastal areas of Sichang island, Thailand.

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 7, p. 1, doi. 10.1186/1471-2164-13-S7-S29

By:

Somboonna, Naraporn;
Assawamakin, Anunchai;
Wilantho, Alisa;
Tangphatsornruang, Sithichoke;
Tongsima, Sissades

Publication type:

Article

A de novo next generation genomic sequence assembler based on string graph and MapReduce cloud computing framework.

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 7, p. 1, doi. 10.1186/1471-2164-13-S7-S28

By:

Yu-Jung Chang;
Chien-Chih Chen;
Chuen-Liang Chen;
Jan-Ming Ho

Publication type:

Article

Disease gene identification by random walk on multigraphs merging heterogeneous genomic and phenotype data.

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 7, p. 1, doi. 10.1186/1471-2164-13-S7-S27

By:

Yongjin Li;
Jinyan Li

Publication type:

Article

Discovering pathway cross-talks based on functional relations between pathways.

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 7, p. 1, doi. 10.1186/1471-2164-13-S7-S25

By:

Chia-Lang Hsu;
Ueng-Cheng Yang

Publication type:

Article

Integration of interactive, multi-scale network navigation approach with Cytoscape for functional genomics in the big data era.

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 7, p. 1, doi. 10.1186/1471-2164-13-S7-S24

By:

Praneenararat, Thanet;
Takagi, Toshihisa;
Iwasaki, Wataru

Publication type:

Article

An approach to identifying drug resistance associated mutations in bacterial strains.

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 7, p. 1, doi. 10.1186/1471-2164-13-S7-S23

By:

Wozniak, Michal;
Tiuryn, Jerzy;
Limsoon Wong

Publication type:

Article

Blocking Protein kinase C signaling pathway: mechanistic insights into the anti-leishmanial activity of prospective herbal drugs from Withania somnifera.

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 7, p. 1, doi. 10.1186/1471-2164-13-S7-S20

By:

Grover, Abhinav;
Katiyar, Shashank Prakash;
Jeyakanthan, Jeyaraman;
Dubey, Vikash Kumar;
Sundar, Durai

Publication type:

Article

Space-related pharma-motifs for fast search of protein binding motifs and polypharmacological targets.

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 7, p. 1, doi. 10.1186/1471-2164-13-S7-S21

By:

Yi-Yuan Chiu;
Chun-Yu Lin;
Chih-Ta Lin;
Kai-Cheng Hsu;
Li-Zen Chang;
Jinn-Moon Yang

Publication type:

Article

A computational tool for the design of live attenuated virus vaccine based on microRNA-mediated gene silencing.

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 7, p. 1, doi. 10.1186/1471-2164-13-S7-S15

By:

Wichadakul, Duangdao;
Mhuantong, Wuttichai;
Jongkaewwattana, Anan;
Ingsriswang, Supawadee

Publication type:

Article

Computational discovery and RT-PCR validation of novel Burkholderia conserved and Burkholderia pseudomallei unique sRNAs.

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 7, p. 1, doi. 10.1186/1471-2164-13-S7-S13

By:

Jia-Shiun Khoo;
Shiao-Fei Chai;
Mohamed, Rahmah;
Nathan, Sheila;
Firdaus-Raih, Mohd

Publication type:

Article

In silico engineering of aggregation-prone recombinant proteins for substrate recognition by the chaperonin GroEL.

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 7, p. 1, doi. 10.1186/1471-2164-13-S7-S22

By:

Kumar, Vipul;
Punetha, Ankita;
Sundar, Durai;
Chaudhuri, Tapan K.

Publication type:

Article

C-mii: a tool for plant miRNA and target identification.

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 7, p. 1, doi. 10.1186/1471-2164-13-S7-S16

By:

Numnark, Somrak;
Mhuantong, Wuttichai;
Ingsriswang, Supawadee;
Wichadakul, Duangdao

Publication type:

Article

Preferential regulation of stably expressed genes in the human genome suggests a widespread expression buffering role of microRNAs.

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 7, p. 1, doi. 10.1186/1471-2164-13-S7-S14

By:

Zhen Yang;
Dong Dong;
Zhaolei Zhang;
Crabbe, M. James C.;
Li Wang;
Yang Zhong

Publication type:

Article

The parasite specific substitution matrices improve the annotation of apicomplexan proteins.

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 7, p. 1, doi. 10.1186/1471-2164-13-S7-S19

By:

Ali, Jamshaid;
Thummala, Shashi Rekha;
Ranjan, Akash

Publication type:

Article

Comprehensive analysis of microRNAs in breast cancer.

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 7, p. 1, doi. 10.1186/1471-2164-13-S7-S18

By:

Hong-Tai Chang;
Sung-Chou Li;
Meng-Ru Ho;
Hung-Wei Pan;
Luo-Ping Ger;
Ling-Yueh Hu;
Shou-Yu Yu;
Wen-Hsiung Li;
Kuo-Wang Tsai

Publication type:

Article

MicroRNA-centric measurement improves functional enrichment analysis of co-expressed and differentially expressed microRNA clusters.

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 7, p. 1, doi. 10.1186/1471-2164-13-S7-S17

By:

Su Yeon Lee;
Kyung-Ah Sohn;
Ju Han Kim

Publication type:

Article

Feasibility of using 454 pyrosequencing for studying quasispecies of the whole dengue viral genome.

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 7, p. 1, doi. 10.1186/1471-2164-13-S7-S7

By:

Chin-inmanu, Kwanrutai;
Suttitheptumrong, Aroonroong;
Sangsrakru, Duangjai;
Tangphatsornruang, Sithichoke;
Tragoonrung, Somvong;
Malasit, Prida;
Tungpradabkul, Sumalee;
Suriyaphol, Prapat

Publication type:

Article

Quantitative assessment of mitochondrial DNA copies from whole genome sequencing.

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 7, p. 1, doi. 10.1186/1471-2164-13-S7-S5

By:

Hsueh-Ting Chu;
Hsiao, William W. L.;
Tsao, Theresa T. H.;
Ching-Mao Chang;
Yen-Wenn Liu;
Chen-Chieh Fan;
Han Lin;
Hen-Hong Chang;
Tze-Jung Yeh;
Jen-Chih Chen;
Dun-Ming Huang;
Chaur-Chin Chen;
Cheng-Yan Kao

Publication type:

Article

Bayesian prediction of bacterial growth temperature range based on genome sequences.

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 7, p. 1, doi. 10.1186/1471-2164-13-S7-S3

By:

Jensen, Dan B.;
Vesth, Tammi C.;
Hallin, Peter F.;
Pedersen, Anders G.;
Ussery, David W.

Publication type:

Article

Meta-analytical biomarker search of EST expression data reveals three differentially expressed candidates.

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 7, p. 1, doi. 10.1186/1471-2164-13-S7-S12

By:

Wu, Timothy H.;
Chu, Lichieh J.;
Jian-Chiao Wang;
Ting-Wen Chen;
Yin-Jing Tien;
Wen-Chang Lin;
Ng, Wailap V.

Publication type:

Article

Whole-genome sequencing and identification of Morganella morganii KT pathogenicity-related genes.

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 7, p. 1, doi. 10.1186/1471-2164-13-S7-S4

By:

Yu-Tin Chen;
Hwei-Ling Peng;
Wei-Chung Shia;
Fang-Rong Hsu;
Chuian-Fu Ken;
Yu-Ming Tsao;
Chang-Hua Chen;
Chun-Eng Liu;
Ming-Feng Hsieh;
Huang-Chi Chen;
Chuan-Yi Tang;
Tien-Hsiung Ku

Publication type:

Article

A novel unbiased measure for motif co-occurrence predicts combinatorial regulation of transcription.

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 7, p. 1, doi. 10.1186/1471-2164-13-S7-S11

By:

Vandenbon, Alexis;
Kumagai, Yutaro;
Akira, Shizuo;
Standley, Daron M.

Publication type:

Article

An analysis of the transcriptome of Teladorsagia circumcincta: its biological and biotechnological implications.

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 7, p. 1, doi. 10.1186/1471-2164-13-S7-S10

By:

Menon, Ranjeeta;
Gasser, Robin B.;
Mitreva, Makedonka;
Ranganathan, Shoba

Publication type:

Article

FastAnnotator- an efficient transcript annotation web tool.

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 7, p. 1, doi. 10.1186/1471-2164-13-S7-S9

By:

Ting-Wen Chen;
Ruei-Chi Richie Gan;
Wu, Timothy H.;
Po-Jung Huang;
Cheng-Yang Lee;
Chen, Yi-Ywan M.;
Che-Chun Chen;
Petrus Tang

Publication type:

Article

Helminth secretome database (HSD): a collection of helminth excretory/secretory proteins predicted from expressed sequence tags (ESTs).

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 7, p. 1, doi. 10.1186/1471-2164-13-S7-S8

By:

Garg, Gagan;
Ranganathan, Shoba

Publication type:

Article

snpTree - a web-server to identify and construct SNP trees from whole genome sequence data.

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 7, p. 1, doi. 10.1186/1471-2164-13-S7-S6

By:

Leekitcharoenphon, Pimlapas;
Kaas, Rolf S.;
Frølund Thomsen, Martin Christen;
Friis, Carsten;
Rasmussen, Simon;
Aarestrup, Frank M.

Publication type:

Article

iLOCi: a SNP interaction prioritization technique for detecting epistasis in genome-wide association studies.

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 7, p. 1, doi. 10.1186/1471-2164-13-S7-S2

By:

Piriyapongsa, Jittima;
Ngamphiw, Chumpol;
Intarapanich, Apichart;
Kulawonganunchai, Supasak;
Assawamakin, Anunchai;
Bootchai, Chaiwat;
Shaw, Philip J.;
Tongsima, Sissades

Publication type:

Article

Advances in translational bioinformatics and population genomics in the Asia-Pacific.

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 7, p. 1, doi. 10.1186/1471-2164-13-S7-S1

By:

Ranagathan, Shoba;
Tongsima, Sissades;
Chan, Jonathan;
Tin Wee Tan;
Schönbach, Christian

Publication type:

Article