Works matching IS 14712164 AND DT 2012 AND VI 13 AND IP 1

Results: 739

High-resolution genome-wide scan of genes, gene-networks and cellular systems impacting the yeast ionome.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2164-13-623

By:

Danni Yu;
Danku, John M. C.;
Baxter, Ivan;
Sungjin Kim;
Vatamaniuk, Olena K.;
Vitek, Olga;
Ouzzani, Mourad;
Salt, David E.

Publication type:

Article

Combinatorial control of temporal gene expression in the Drosophila wing by enhancers and core promoters.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2164-13-498

By:

O'Keefe, David D.;
Thomas, Sean R.;
Bolin, Kelsey;
Griggs, Ellen;
Edgar, Bruce A.;
Buttitta, Laura A.

Publication type:

Article

A catalogue of putative unique transcripts from Douglas-fir (Pseudotsugamenziesii) based on 454 transcriptome sequencing of genetically diverse, drought stressed seedlings.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2164-13-673

By:

Muller, Thomas;
Ensminger, Ingo;
Schmid, Karl J.

Publication type:

Article

Identification, characterization, and utilization of genome-wide simple sequence repeats to identify a QTL for acidity in apple.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2164-13-537

By:

Qiong Zhang;
Baiquan Ma;
Hui Li;
Yuansheng Chang;
Yuanyuan Han;
Jing Li;
Guochao Wei;
Shuang Zhao;
Khan, Muhammad Awais;
Ying Zhou;
Chao Gu;
Xingzhong Zhang;
Zhenhai Han;
Korban, Schuyler S.;
Shaohua Li;
Yuepeng Han

Publication type:

Article

Transcriptomic analysis of peritoneal cells in a mouse model of sepsis: confirmatory and novel results in early and late sepsis.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2164-13-509

By:

Bhatty, Minny;
Fan, Ruping;
Muir, William M.;
Pruett, Stephen B.;
Nanduri, Bindu

Publication type:

Article

Next generation sequencing analysis reveals a relationship between rDNA unit diversity and locus number in Nicotiana diploids.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2164-13-722

By:

Matyášek, Roman;
Renny-Byfield, Simon;
Fulneček, Jaroslav;
Macas, Jiř í.;
Grandbastien, Marie-Angele;
Nichols, Richard;
Leitch, Andrew;
Kovařík, Aleš

Publication type:

Article

Genome-wide annotation and analysis of zebra finch microRNA repertoire reveal sex-biased expression.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2164-13-727

By:

Luo, Guan-Zheng;
Hafner, Markus;
Zhimin Shi;
Brown, Miguel;
Feng, Gui-Hai;
Tuschl, Thomas;
Wang, Xiu-Jie;
XiaoChing LI

Publication type:

Article

Design of a tobacco exon array with application to investigate the differential cadmium accumulation property in two tobacco varieties.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2164-13-674

By:

Martin, Florian;
Bovet, Lucien;
Cordier, Audrey;
Stanke, Mario;
Gunduz, Irfan;
Peitsch, Manuel C.;
Ivanov, Nikolai V.

Publication type:

Article

Decreased miR-192 expression in peripheral blood of asthmatic individuals undergoing an allergen inhalation challenge.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2164-13-655

By:

Yamamoto, Masatsugu;
Singh, Amrit;
Ruan, Jian;
Gauvreau, Gail M.;
O'Byrne, Paul M.;
Carlsten, Christopher R.;
FitzGerald, J. Mark;
Boulet, Louis-Philippe;
Tebbutt, Scott J.

Publication type:

Article

Genomic resources for a model in adaptation and speciation research: characterization of the Poecilia mexicana transcriptome.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2164-13-652

By:

Kelley, Joanna L.;
Passow, Courtney N.;
Plath, Martin;
Rodriguez, Lenin Arias;
Yee, Muh-Ching;
Tobler, Michael

Publication type:

Article

Genetic structure of community acquired methicillin-resistant Staphylococcus aureus USA300.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2164-13-508

By:

Tewhey, Ryan;
Cannavino, Christopher R.;
Leake, John AD;
Bansal, Vikas;
Topol, Eric J.;
Torkamani, Ali;
Bradley, John S.;
Schork, Nicholas J.

Publication type:

Article

Coevolution between simple sequence repeats (SSRs) and virus genome size.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2164-13-435

By:

Xiangyan Zhao;
Yonglei Tian;
Ronghua Yang;
Haiping Feng;
Qingjian Ouyang;
You Tian;
Zhongyang Tan;
Mingfu Li;
Yile Niu;
Jianhui Jiang;
Guoli Shen;
Ruqin Yu

Publication type:

Article

Identification of miRNAs and their targets from Brassica napus by high-throughput sequencing and degradome analysis.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2164-13-421

By:

Xu, Miao Y.;
Yun Dong;
Zhang, Qiu X.;
Lan Zhang;
Luo, Yan Z.;
Jie Sun;
Fan, Yun L.;
Wang, Lei

Publication type:

Article

Whole-genome microarray analysis and functional characterization reveal distinct gene expression profiles and patterns in two mouse models of ileal inflammation.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2164-13-377

By:

Avula, Leela Rani;
Knapen, Dries;
Buckinx, Roeland;
Vergauwen, Lucia;
Adriaensen, Dirk;
Nassauw, Luc Van;
Timmermans, Jean-Pierre

Publication type:

Article

Genomic insights of protein arginine methyltransferase Hmt1 binding reveals novel regulatory functions.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2164-13-728

By:

Milliman, Eric J.;
Hu, Zihua;
Yu, Michael C.

Publication type:

Article

Identification of genome-wide copy number variations among diverse pig breeds by array CGH.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2164-13-725

By:

Yan Li;
Shuqi Mei;
Xuying Zhang;
Xianwen Peng;
Gang Liu;
Hu Tao;
Huayu Wu;
Siwen Jiang;
Yuanzhu Xiong;
Fenge Li

Publication type:

Article

An integrated approach of comparative genomics and heritability analysis of pig and human on obesity trait: evidence for candidate genes on human chromosome 2.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2164-13-711

By:

Jaemin Kim;
Taeheon Lee;
Tae-Hun Kim;
Kyung-Tai Lee;
Heebal Kim

Publication type:

Article

Pan-histone deacetylase inhibitors regulate signaling pathways involved in proliferative and pro-inflammatory mechanisms in H9c2 cells.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2164-13-709

By:

Majumdar, Gipsy;
Adris, Piyatilake;
Bhargava, Neha;
Chen, Hao;
Raghow, Rajendra

Publication type:

Article

Identification of 30 gene ends using transcriptional and genomic conservation across vertebrates.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2164-13-708

By:

Morgan, Marcos;
Iaconcig, Alessandra;
Muro, Andrés Fernando

Publication type:

Article

Structure and evolution of barley powdery mildew effector candidates.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2164-13-694

By:

Pedersen, Carsten;
Themaat, Emiel Ver Loren van;
McGuffin, Liam J.;
Abbott, James C.;
Burgis, Timothy A.;
Barton, Geraint;
Bindschedler, Laurence V.;
Lu, Xunli;
Maekawa, Takaki;
Weβling, Ralf;
Cramer, Rainer;
Thordal-Christensen, Hans;
Panstruga, Ralph;
Spanu, Pietro D.

Publication type:

Article

Next generation sequencing analysis reveals a relationship between rDNA unit diversity and locus number in Nicotiana diploids.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2164-13-1

By:

Matyášek, Roman;
Renny-Byfield, Simon;
Fulneċek, Jaroslav;
Macas, Jir í;
Grandbastien, Marie-Angele;
Nichols, Richard;
Leitch, Andrew;
Kovařík, Aleš

Publication type:

Article

Abundance, distribution and potential impact of transposable elements in the genome of Mycosphaerella fijiensis.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2164-13-720

By:

Santana, Mateus F.;
Silva, José C. F.;
Batista, Aline D.;
Ribeiro, Lílian E.;
da Silva, Gilvan F.;
de Araújo, Elza F.;
de Queiroz, Marisa V.

Publication type:

Article

Transcriptome analysis of Sacha Inchi (Plukenetia volubilis L.) seeds at two developmental stages.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2164-13-716

By:

Xiaojuan Wang;
Ronghua Xu;
Ruling Wang;
Aizhong Liu

Publication type:

Article

MicroRNAs and essential components of the microRNA processing machinery are not encoded in the genome of the ctenophore Mnemiopsis leidyi.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2164-13-714

By:

Maxwell, Evan K.;
Ryan, Joseph F.;
Schnitzler, Christine E.;
Browne, William E.;
Baxevanis, Andreas D.

Publication type:

Article

CBS: an open platform that integrates predictive methods and epigenetics information to characterize conserved regulatory features in multiple Drosophila genomes.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2164-13-688

By:

Blanco, Enrique;
Corominas, Montserrat

Publication type:

Article

Stage-specific expression of protease genes in the apicomplexan parasite, Eimeria tenella.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2164-13-685

By:

Katrib, Marilyn;
Ikin, Rowan J.;
Brossier, Fabien;
Robinson, Michelle;
Slapetova, Iveta;
Sharman, Philippa A.;
Walker, Robert A.;
Belli, Sabina I.;
Tomley, Fiona M.;
Smith, Nicholas C.

Publication type:

Article

An S/T-Q cluster domain census unveils new putative targets under Tel1/Mec1 control.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2164-13-664

By:

Cheung, Hannah C.;
Lucas, F. Anthony San;
Hicks, Stephanie;
Chang, Kyle;
Bertuch, Alison A.;
Ribes-Zamora, Albert

Publication type:

Article

Insights into the regulation of human CNV-miRNAs from the view of their target genes.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2164-13-707

By:

Xudong Wu;
Dinglin Zhang;
Guohui Li

Publication type:

Article

Genetic architecture of complex agronomic traits examined in two testcross populations of rye (Secale cereale L.).

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2164-13-706

By:

Miedaner, Thomas;
Hübner, Marlen;
Korzun, Viktor;
Schmiedchen, Brigitta;
Bauer, Eva;
Haseneyer, Grit;
Wilde, Peer;
Reif, Jochen C.

Publication type:

Article

Transcriptomic analysis of 'Suli' pear (Pyrus pyrifolia white pear group) buds during the dormancy by RNA-Seq.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2164-13-700

By:

Guoqin Liu;
Wanshun Li;
Penghua Zheng;
Tong Xu;
Lijuan Chen;
Dongfeng Liu;
Sayed Hussain;
Yuanwen Teng

Publication type:

Article

Sequencing of mitochondrial genomes of nine Aspergillus and Penicillium species identifies mobile introns and accessory genes as main sources of genome size variability.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2164-13-698

By:

Joardar, Vinita;
Abrams, Natalie F.;
Hostetler, Jessica;
Paukstelis, Paul J.;
Pakala, Suchitra;
Pakala, Suman B.;
Zafar, Nikhat;
Abolude, Olukemi O.;
Payne, Gary;
Andrianopoulos, Alex;
Denning, David W.;
C. Nierman, William

Publication type:

Article

iASeq: integrative analysis of allele-specificity of protein-DNA interactions in multiple ChIP-seq datasets.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2164-13-681

By:

Yingying Wei;
Xia Li;
Qian-fei Wang;
Hongkai Ji

Publication type:

Article

Pairwise shared genomic segment analysis in three Utah high-risk breast cancer pedigrees.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2164-13-676

By:

Cai, Zheng;
Thomas, Alun;
Teerlink, Craig;
Farnham, James M.;
Cannon-Albright, Lisa A.;
Camp, Nicola J.

Publication type:

Article

Cell population-specific expression analysis of human cerebellum.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2164-13-610

By:

Kuhn, Alexandre;
Kumar, Azad;
Beilina, Alexandra;
Dillman, Allissa;
Cookson, Mark R.;
Singleton, Andrew B.

Publication type:

Article

Construction of the first genetic linkage map of Japanese gentian (Gentianaceae).

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2164-13-672

By:

Nakatsuka, Takashi;
Yamada, Eri;
Saito, Misa;
Hikage, Takashi;
Ushiku, Yuka;
Nishihara, Masahiro

Publication type:

Article

Asymmetric purine-pyrimidine distribution in cellular small RNA population of papaya.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2164-13-682

By:

Aryal, Rishi;
Yang, Xiaozeng;
Yu, Qingyi;
Sunkar, Ramanjulu;
Li, Lei;
Ming, Ray

Publication type:

Article

MirSNP, a database of polymorphisms altering miRNA target sites, identifies miRNA-related SNPs in GWAS SNPs and eQTLs.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2164-13-661

By:

Chenxing Liu;
Fuquan Zhang;
Tingting Li;
Ming Lu;
Lifang Wang;
Weihua Yue;
Dai Zhang

Publication type:

Article

Genetic linkage maps for Asian and American lotus constructed using novel SSR markers derived from the genome of sequenced cultivar.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2164-13-653

By:

Mei Yang;
Yanni Han;
Robert VanBuren;
Ray Ming;
Liming Xu;
Yuepeng Han;
Yanling Liu

Publication type:

Article

Efficient assembly and annotation of the transcriptome of catfish by RNA-Seq analysis of a doubled haploid homozygote.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2164-13-595

By:

Shikai Liu;
Yu Zhang;
Zunchun Zhou;
Geoff Waldbieser;
Fanyue Sun;
Jianguo Lu;
Jiaren Zhang;
Yanliang Jiang;
Hao Zhang;
Xiuli Wang;
KV Rajendran;
Lester Khoo;
Huseyin Kucuktas;
Eric Peatman;
Zhanjiang Liu

Publication type:

Article

Weighted pedigree-based statistics for testing the association of rare variants.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2164-13-667

By:

Yin Yao Shugart;
Yun Zhu;
Wei Guo;
Momiao Xiong

Publication type:

Article

Heat shock transcriptional factors in Malus domestica: identification, classification and expression analysis.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2164-13-639

By:

Giorno, Filomena;
Guerriero, Gea;
Baric, Sanja;
Mariani, Celestina

Publication type:

Article

Identification of proteins binding coding and non-coding human RNAs using protein microarrays.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2164-13-633

By:

Siprashvili, Zurab;
Webster, Dan E.;
Kretz, Markus;
Johnston, Danielle;
Rinn, John L.;
Chang, Howard Y.;
Khavari, Paul A.

Publication type:

Article

MMpred: functional miRNA - mRNA interaction analyses by miRNA expression prediction.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2164-13-620

By:

Stempor, Przemyslaw A;
Cauchi, Michael;
Wilson, Paul

Publication type:

Article

De novo characterization of the Chinese fir (Cunninghamia lanceolata) transcriptome and analysis of candidate genes involved in cellulose and lignin biosynthesis.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2164-13-648

By:

Hua-Hong Huang;
Li-Li Xu;
Zai-Kang Tong;
Er-Pei Lin;
Qing-Po Liu;
Long-Jun Cheng;
Mu-Yuan Zhu1

Publication type:

Article

Generation and analysis of expressed sequence tags in the extreme large genomes Lilium and Tulipa.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2164-13-640

By:

Shahin, Arwa;
Kaauwen, Martijn van;
Esselink, Danny;
Bargsten, Joachim W.;
Tuyl, Jaap M. van;
Visser, Richard G. F.;
Arens, Paul

Publication type:

Article

Copynumber: Efficient algorithms for singleand multi-track copy number segmentation.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2164-13-591

By:

Nilsen, Gro;
Liestøl, Knut;
Loo, Peter Van;
Vollan, Hans Kristian Moen;
Eide, Marianne B.;
Rueda, Oscar M.;
Chin, Suet-Feung;
Russell, Roslin;
Baumbusch, Lars O.;
Caldas, Carlos;
Børresen-Dale, Anne-Lise;
Lingjærde, Ole Christian

Publication type:

Article

Estimating variation within the genes and inferring the phylogeny of 186 sequenced diverse Escherichia coli genomes.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2164-13-577

By:

Kaas, Rolf S.;
Friis, Carsten;
Ussery, David W.;
Aarestrup, Frank M.

Publication type:

Article

QTL mapping of the production of wine aroma compounds by yeast.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2164-13-573

By:

Steyer, Damien;
Ambroset, Chloe;
Brion, Christian;
Claudel, Patricia;
Delobel, Pierre;
Sanchez, Isabelle;
Erny, Claude;
Blondin, Bruno;
Karst, Francis;
Legras, Jean-Luc

Publication type:

Article

Unique small RNA signatures uncovered in the tammar wallaby genome.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2164-13-559

By:

Lindsay, James;
Carone, Dawn M.;
Brown, Judy;
Hall, Laura;
Qureshi, Sohaib;
Mitchell, Sarah E.;
Jannetty, Nicholas;
Hannon, Greg;
Renfree, Marilyn;
Pask, Andrew;
O'Neill, Michael;
O'Neill, Rachel

Publication type:

Article

High-resolution genotyping and mapping of recombination and gene conversion in the protozoan Theileria parva using whole genome sequencing.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2164-13-503

By:

Henson, Sonal;
Bishop, Richard P.;
Morzaria, Subhash;
Spooner, Paul R.;
Pelle, Roger;
Poveda, Lucy;
Ebeling, Martin;
Küng, Erich;
Certa, Ulrich;
Daubenberger, Claudia A.;
Qi, Weihong

Publication type:

Article