Works matching IS 14712164 AND DT 2011 AND VI 12

Results: 886

Turbot reovirus (SMReV) genome encoding a FAST protein with a non-AUG start site.

Published in:

BMC Genomics, 2011, v. 12, p. 1, doi. 10.1186/1471-2164-12-323

By:

Ke, Fei;
He, Li-Bo;
Pei, Chao;
Zhang, Qi-Ya

Publication type:

Article

Exome-wide DNA capture and next generation sequencing in domestic and wild species.

Published in:

BMC Genomics, 2011, v. 12, p. 1, doi. 10.1186/1471-2164-12-347

By:

Cosart, Ted;
Beja-Pereira, Albano;
Chen, Shanyuan;
Ng, Sarah B;
Shendure, Jay;
Luikart, Gordon

Publication type:

Article

MicroRNA genes preferentially expressed in dendritic cells contain sites for conserved transcription factor binding motifs in their promoters.

Published in:

BMC Genomics, 2011, v. 12, p. 1, doi. 10.1186/1471-2164-12-330

By:

Jansen, Bastiaan JH;
Sama, Iziah E;
Eleveld-Trancikova, Dagmar;
van Hout-Kuijer, Maaike A;
Jansen, Joop H;
Huynen, Martijn A;
Adema, Gosse J

Publication type:

Article

Chromatin structure characteristics of pre-miRNA genomic sequences.

Published in:

BMC Genomics, 2011, v. 12, p. 1, doi. 10.1186/1471-2164-12-329

By:

Zhu, Shijia;
Jiang, Qinghua;
Wang, Guohua;
Liu, Bo;
Teng, Mingxiang;
Wang, Yadong

Publication type:

Article

Unresolved orthology and peculiar coding sequence properties of lamprey genes: the KCNA gene family as test case.

Published in:

BMC Genomics, 2011, v. 12, p. 1, doi. 10.1186/1471-2164-12-325

By:

Qiu, Huan;
Hildebrand, Falk;
Kuraku, Shigehiro;
Meyer, Axel

Publication type:

Article

Investigating the global genomic diversity of Escherichia coli using a multi-genome DNA microarray platform with novel gene prediction strategies.

Published in:

BMC Genomics, 2011, v. 12, p. 1, doi. 10.1186/1471-2164-12-349

By:

Jackson, Scott A;
Patel, Isha R;
Barnaba, Tammy;
LeClerc, Joseph E;
Cebula, Thomas A

Publication type:

Article

Application of site and haplotype-frequency based approaches for detecting selection signatures in cattle.

Published in:

BMC Genomics, 2011, v. 12, p. 1, doi. 10.1186/1471-2164-12-318

By:

Qanbari, Saber;
Gianola, Daniel;
Hayes, Ben;
Schenkel, Flavio;
Miller, Steve;
Moore, Stephen;
Thaller, Georg;
Simianer, Henner

Publication type:

Article

Global analysis of gene expression in mineralizing fish vertebra-derived cell lines: new insights into anti-mineralogenic effect of vanadate.

Published in:

BMC Genomics, 2011, v. 12, p. 1, doi. 10.1186/1471-2164-12-310

By:

Tiago, Daniel M;
Laizé, Vincent;
Bargelloni, Luca;
Ferraresso, Serena;
Romualdi, Chiara;
Cancela, M Leonor

Publication type:

Article

Short read Illumina data for the de novo assembly of a non-model snail species transcriptome (Radix balthica, Basommatophora, Pulmonata), and a comparison of assembler performance.

Published in:

BMC Genomics, 2011, v. 12, p. 1, doi. 10.1186/1471-2164-12-317

By:

Feldmeyer, Barbara;
Wheat, Christopher W;
Krezdorn, Nicolas;
Rotter, Björn;
Pfenninger, Markus

Publication type:

Article

Transcriptomic, proteomic and metabolomic analysis of UV-B signaling in maize.

Published in:

BMC Genomics, 2011, v. 12, p. 1, doi. 10.1186/1471-2164-12-321

By:

Casati, Paula;
Campi, Mabel;
Morrow, Darren J;
Fernandes, John F;
Walbot, Virginia

Publication type:

Article

RNA-seq: technical variability and sampling.

Published in:

BMC Genomics, 2011, v. 12, p. 1, doi. 10.1186/1471-2164-12-293

By:

McIntyre, Lauren M;
Lopiano, Kenneth K;
Morse, Alison M;
Amin, Victor;
Oberg, Ann L;
Young, Linda J;
Nuzhdin, Sergey V

Publication type:

Article

Analysis of BAC end sequences in oak, a keystone forest tree species, providing insight into the composition of its genome.

Published in:

BMC Genomics, 2011, v. 12, p. 1, doi. 10.1186/1471-2164-12-292

By:

Faivre Rampant, Patricia;
Lesur, Isabelle;
Boussardon, Clément;
Bitton, Frédérique;
Martin-Magniette, Marie-Laure;
Bodénès, Catherine;
Le Provost, Grégoire;
Bergès, Hélène;
Fluch, Sylvia;
Kremer, Antoine;
Plomion, Christophe

Publication type:

Article

Analysis of BAC-end sequences in rainbow trout: Content characterization and assessment of synteny between trout and other fish genomes.

Published in:

BMC Genomics, 2011, v. 12, p. 1, doi. 10.1186/1471-2164-12-314

By:

Genet, Carine;
Dehais, Patrice;
Palti, Yniv;
Gao, Guangtu;
Gavory, Frederick;
Wincker, Patrick;
Quillet, Edwige;
Boussaha, Mekki

Publication type:

Article

A tissue-specific landscape of sense/antisense transcription in the mouse intestine.

Published in:

BMC Genomics, 2011, v. 12, p. 1, doi. 10.1186/1471-2164-12-305

By:

Klostermeier, Ulrich C;
Barann, Matthias;
Wittig, Michael;
Häsler, Robert;
Franke, Andre;
Gavrilova, Olga;
Kreck, Benjamin;
Sina, Christian;
Schilhabel, Markus B;
Schreiber, Stefan;
Rosenstiel, Philip

Publication type:

Article

Genome-wide gene expression analysis supports a developmental model of low temperature tolerance gene regulation in wheat (Triticum aestivum L.).

Published in:

BMC Genomics, 2011, v. 12, p. 1, doi. 10.1186/1471-2164-12-299

By:

Laudencia-Chingcuanco, Debbie;
Ganeshan, Seedhabadee;
You, Frank;
Fowler, Brian;
Chibbar, Ravindra;
Anderson, Olin

Publication type:

Article

Single nucleotide polymorphism discovery from expressed sequence tags in the waterflea Daphnia magna.

Published in:

BMC Genomics, 2011, v. 12, p. 1, doi. 10.1186/1471-2164-12-309

By:

Orsini, Luisa;
Jansen, Mieke;
Souche, Erika L;
Geldof, Sarah;
De Meester, Luc

Publication type:

Article

Genomic comparison of multi-drug resistant invasive and colonizing Acinetobacter baumannii isolated from diverse human body sites reveals genomic plasticity.

Published in:

BMC Genomics, 2011, v. 12, p. 1, doi. 10.1186/1471-2164-12-291

By:

Sahl, Jason W;
Johnson, J Kristie;
Harris, Anthony D;
Phillippy, Adam M;
Hsiao, William W;
Thom, Kerri A;
Rasko, David A

Publication type:

Article

Gene coexpression clusters and putative regulatory elements underlying seed storage reserve accumulation in Arabidopsis.

Published in:

BMC Genomics, 2011, v. 12, p. 1, doi. 10.1186/1471-2164-12-286

By:

Peng, Fred Y;
Weselake, Randall J

Publication type:

Article

ngs_backbone: a pipeline for read cleaning, mapping and SNP calling using Next Generation Sequence.

Published in:

BMC Genomics, 2011, v. 12, p. 1, doi. 10.1186/1471-2164-12-285

By:

Blanca, Jose M;
Pascual, Laura;
Ziarsolo, Peio;
Nuez, Fernando;
Cañizares, Joaquin

Publication type:

Article

Characterisation of the transcriptome of a wild great tit Parus major population by next generation sequencing.

Published in:

BMC Genomics, 2011, v. 12, p. 1, doi. 10.1186/1471-2164-12-283

By:

Santure, Anna W;
Gratten, Jake;
Mossman, Jim A;
Sheldon, Ben C;
Slate, Jon

Publication type:

Article

Comparative genomic analysis of Vibrio parahaemolyticus: serotype conversion and virulence.

Published in:

BMC Genomics, 2011, v. 12, p. 1, doi. 10.1186/1471-2164-12-294

By:

Chen, Yuansha;
Stine, O Colin;
Badger, Jonathan H;
Gil, Ana I;
Nair, G Balakrish;
Nishibuchi, Mitsuaki;
Fouts, Derrick E

Publication type:

Article

Polyomic profiling reveals significant hepatic metabolic alterations in glucagon-receptor (GCGR) knockout mice: implications on anti-glucagon therapies for diabetes.

Published in:

BMC Genomics, 2011, v. 12, p. 1, doi. 10.1186/1471-2164-12-281

By:

Yang, Jianxin;
MacDougall, Margit L;
McDowell, Michael T;
Xi, Li;
Wei, Ru;
Zavadoski, William J;
Molloy, Mark P;
Baker, John D;
Kuhn, Max;
Cabrera, Over;
Treadway, Judith L

Publication type:

Article

Human nucleosomes: special role of CG dinucleotides and Alu-nucleosomes.

Published in:

BMC Genomics, 2011, v. 12, n. 1, p. 1, doi. 10.1186/1471-2164-12-273

By:

Bettecken, Thomas;
Frenkel, Zakharia M;
Trifonov, Edward N

Publication type:

Article

The mitochondrial genome sequence of the ciliate Paramecium caudatum reveals a shift in nucleotide composition and codon usage within the genus Paramecium.

Published in:

BMC Genomics, 2011, v. 12, n. 1, p. 1, doi. 10.1186/1471-2164-12-272

By:

Barth, Dana;
Berendonk, Thomas U

Publication type:

Article

Song exposure regulates known and novel microRNAs in the zebra finch auditory forebrain.

Published in:

BMC Genomics, 2011, v. 12, n. 1, p. 1, doi. 10.1186/1471-2164-12-277

By:

Gunaratne, Preethi H;
Lin, Ya-Chi;
Benham, Ashley L;
Drnevich, Jenny;
Coarfa, Cristian;
Tennakoon, Jayantha B;
Creighton, Chad J;
Kim, Jong H;
Milosavljevic, Aleksandar;
Watson, Michael;
Griffiths-Jones, Sam;
Clayton, David F

Publication type:

Article

Analysis of common bean expressed sequence tags identifies sulfur metabolic pathways active in seed and sulfur-rich proteins highly expressed in the absence of phaseolin and major lectins.

Published in:

BMC Genomics, 2011, v. 12, p. 1, doi. 10.1186/1471-2164-12-268

By:

Yin, Fuqiang;
Pajak, Agnieszka;
Chapman, Ralph;
Sharpe, Andrew;
Huang, Shangzhi;
Marsolais, Frédéric

Publication type:

Article

Modeling the asymmetric evolution of a mouse and rat-specific microRNA gene cluster intron 10 of the Sfmbt2 gene.

Published in:

BMC Genomics, 2011, v. 12, p. 1, doi. 10.1186/1471-2164-12-257

By:

Lehnert, Stefan;
Kapitonov, Vladimir;
Thilakarathne, Pushpike J;
Schuit, Frans C

Publication type:

Article

A genome scan for quantitative trait loci affecting cyanogenic potential of cassava root in an outbred population.

Published in:

BMC Genomics, 2011, v. 12, p. 1, doi. 10.1186/1471-2164-12-266

By:

Whankaew, Sukhuman;
Poopear, Supannee;
Kanjanawattanawong, Supanath;
Tangphatsornruang, Sithichoke;
Boonseng, Opas;
Lightfoot, David A;
Triwitayakorn, Kanokporn

Publication type:

Article

Microarray analysis and scale-free gene networks identify candidate regulators in drought-stressed roots of loblolly pine (P. taeda L.).

Published in:

BMC Genomics, 2011, v. 12, p. 1, doi. 10.1186/1471-2164-12-264

By:

Lorenz, W Walter;
Alba, Rob;
Yu, Yuan-Sheng;
Bordeaux, John M;
Simões, Marta;
Dean, Jeffrey FD

Publication type:

Article

A canine model of Cohen syndrome: Trapped Neutrophil Syndrome.

Published in:

BMC Genomics, 2011, v. 12, p. 1, doi. 10.1186/1471-2164-12-258

By:

Shearman, Jeremy R;
Wilton, Alan N

Publication type:

Article

MicroRNA profiling of rhesus macaque embryonic stem cells.

Published in:

BMC Genomics, 2011, v. 12, n. 1, p. 1, doi. 10.1186/1471-2164-12-276

By:

Sun, Zhenghua;
Wei, Qiang;
Zhang, Yanfeng;
He, Xiechao;
Ji, Weizhi;
Su, Bing

Publication type:

Article

Genes in the terminal regions of orthopoxvirus genomes experience adaptive molecular evolution.

Published in:

BMC Genomics, 2011, v. 12, p. 1, doi. 10.1186/1471-2164-12-261

By:

Esteban, David J;
Hutchinson, Anne P

Publication type:

Article

Novel transposable elements from Anopheles gambiae.

Published in:

BMC Genomics, 2011, v. 12, p. 1, doi. 10.1186/1471-2164-12-260

By:

Fernández-Medina, Rita D;
Struchiner, Cláudio J;
Ribeiro, José MC

Publication type:

Article

The aspartic proteinase family of three Phytophthora species.

Published in:

BMC Genomics, 2011, v. 12, p. 1, doi. 10.1186/1471-2164-12-254

By:

Kay, John;
Meijer, Harold JG;
ten Have, Arjen;
van Kan, Jan AL

Publication type:

Article

An untargeted multi-technique metabolomics approach to studying intracellular metabolites of HepG2 cells exposed to 2,3,7,8-tetrachlorodibenzo-p-dioxin.

Published in:

BMC Genomics, 2011, v. 12, p. 1, doi. 10.1186/1471-2164-12-251

By:

Ruiz-Aracama, Ainhoa;
Peijnenburg, Ad;
Kleinjans, Jos;
Jennen, Danyel;
van Delft, Joost;
Hellfrisch, Caroline;
Lommen, Arjen

Publication type:

Article

A simple Bayesian estimate of direct RNAi gene regulation events from differential gene expression profiles.

Published in:

BMC Genomics, 2011, v. 12, p. 1, doi. 10.1186/1471-2164-12-250

By:

Wilson, Paul A;
Plucinski, Mathew

Publication type:

Article

Understanding Streptococcus suis serotype 2 infection in pigs through a transcriptional approach.

Published in:

BMC Genomics, 2011, v. 12, p. 1, doi. 10.1186/1471-2164-12-253

By:

Liu, Manli;
Fang, Liurong;
Tan, Chen;
Long, Tiansi;
Chen, Huanchun;
Xiao, Shaobo

Publication type:

Article

Integration of Solexa sequences on an ultradense genetic map in Brassica rapa L.

Published in:

BMC Genomics, 2011, v. 12, p. 1, doi. 10.1186/1471-2164-12-249

By:

Li, Wei;
Zhang, Jiefu;
Mou, Yanglong;
Geng, Jianfeng;
McVetty, Peter BE;
Hu, Shengwu;
Li, Genyi

Publication type:

Article

454 sequencing of pooled BAC clones on chromosome 3H of barley.

Published in:

BMC Genomics, 2011, v. 12, p. 1, doi. 10.1186/1471-2164-12-246

By:

Sato, Kazuhiro;
Motoi, Yuka;
Yamaji, Nami;
Yoshida, Hideya

Publication type:

Article

Accuracy and quality assessment of 454 GS-FLX Titanium pyrosequencing.

Published in:

BMC Genomics, 2011, v. 12, p. 1, doi. 10.1186/1471-2164-12-245

By:

Gilles, André;
Meglécz, Emese;
Pech, Nicolas;
Ferreira, Stéphanie;
Malausa, Thibaut;
Martin, Jean-François

Publication type:

Article

Horizontal gene transfer in silkworm, Bombyx mori.

Published in:

BMC Genomics, 2011, v. 12, p. 1, doi. 10.1186/1471-2164-12-248

By:

Zhu, Bo;
Lou, Miao-Miao;
Xie, Guan-Lin;
Zhang, Guo-Qing;
Zhou, Xue-Ping;
Li, Bin;
Jin, Gu-Lei

Publication type:

Article

Preferential regulation of miRNA targets by environmental chemicals in the human genome.

Published in:

BMC Genomics, 2011, v. 12, p. 1, doi. 10.1186/1471-2164-12-244

By:

Wu, Xudong;
Song, Yijiang

Publication type:

Article

Organization and molecular evolution of a disease-resistance gene cluster in coffee trees.

Published in:

BMC Genomics, 2011, v. 12, p. 1, doi. 10.1186/1471-2164-12-240

By:

Ribas, Alessandra F;
Cenci, Alberto;
Combes, Marie-Christine;
Etienne, Hervé;
Lashermes, Philippe

Publication type:

Article

Genome-wide profiling of G protein-coupled receptors in cerebellar granule neurons using high-throughput, real-time PCR.

Published in:

BMC Genomics, 2011, v. 12, p. 1, doi. 10.1186/1471-2164-12-241

By:

Maurel, Benjamin;
Le Digarcher, Anne;
Dantec, Christelle;
Journot, Laurent

Publication type:

Article

A sequence-based genetic linkage map as a reference for Brassica rapa pseudochromosome assembly.

Published in:

BMC Genomics, 2011, v. 12, p. 1, doi. 10.1186/1471-2164-12-239

By:

Wang, Yan;
Sun, Silong;
Liu, Bo;
Wang, Hui;
Deng, Jie;
Liao, Yongcui;
Wang, Qian;
Cheng, Feng;
Wang, Xiaowu;
Wu, Jian

Publication type:

Article

Escherichia coli genome-wide promoter analysis: Identification of additional AtoC binding target elements.

Published in:

BMC Genomics, 2011, v. 12, p. 1, doi. 10.1186/1471-2164-12-238

By:

Pilalis, Eleftherios;
Chatziioannou, Aristotelis A;
Grigoroudis, Asterios I;
Panagiotidis, Christos A;
Kolisis, Fragiskos N;
Kyriakidis, Dimitrios A

Publication type:

Article

Genome-wide survey reveals dynamic widespread tissue-specific changes in DNA methylation during development.

Published in:

BMC Genomics, 2011, v. 12, p. 1, doi. 10.1186/1471-2164-12-231

By:

Liang, Ping;
Song, Fei;
Ghosh, Srimoyee;
Morien, Evan;
Qin, Maochun;
Mahmood, Saleh;
Fujiwara, Kyoko;
Igarashi, Jun;
Nagase, Hiroki;
Held, William A

Publication type:

Article

The effect of measurement error of phenotypes on genome wide association studies.

Published in:

BMC Genomics, 2011, v. 12, p. 1, doi. 10.1186/1471-2164-12-232

By:

Barendse, William

Publication type:

Article

Transcriptome sequencing and microarray development for the Manila clam, Ruditapes philippinarum: genomic tools for environmental monitoring.

Published in:

BMC Genomics, 2011, v. 12, p. 1, doi. 10.1186/1471-2164-12-234

By:

Milan, Massimo;
Coppe, Alessandro;
Reinhardt, Richard;
Cancela, Leonor M;
Leite, Ricardo B;
Saavedra, Carlos;
Ciofi, Claudio;
Chelazzi, Guido;
Patarnello, Tomaso;
Bortoluzzi, Stefania;
Bargelloni, Luca

Publication type:

Article

Genome-level homology and phylogeny of Shewanella (Gammaproteobacteria: lteromonadales: Shewanellaceae).

Published in:

BMC Genomics, 2011, v. 12, p. 1, doi. 10.1186/1471-2164-12-237

By:

Dikow, Rebecca B

Publication type:

Article