Works matching IS 14712105 AND DT 2025 AND VI 26 AND IP 1
Results: 58
Estimation of mosaic loss of Y chromosome cell fraction with genotyping arrays lacking coverage in the pseudoautosomal region.
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- BMC Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12859-025-06076-6
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- Article
BHCox: Bayesian heredity-constrained Cox proportional hazards models for detecting gene-environment interactions.
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- BMC Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12859-025-06077-5
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- Article
MFCADTI: improving drug-target interaction prediction by integrating multiple feature through cross attention mechanism.
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- BMC Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12859-025-06075-7
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- Article
A Dirichlet-multinomial mixed model for determining differential abundance of mutational signatures.
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- BMC Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12859-025-06055-x
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- Article
Harnessing pre-trained models for accurate prediction of protein-ligand binding affinity.
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- BMC Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12859-025-06064-w
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- Article
A novel weighted pseudo-labeling framework based on matrix factorization for adverse drug reaction prediction.
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- BMC Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12859-025-06053-z
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- Article
Identifying risk factors for Alzheimer's disease from multivariate longitudinal clinical data using temporal pattern mining.
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- BMC Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12859-024-06018-8
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- Article
CamITree: a streamlined software for phylogenetic analysis of viral and mitochondrial genomes.
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- BMC Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12859-025-06034-2
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- Article
Using individual barcodes to increase quantification power of massively parallel reporter assays.
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- BMC Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12859-025-06065-9
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- Article
CoMIT: a bioinformatic pipeline for risk-based prediction of COVID-19 test inclusivity.
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- BMC Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12859-025-06046-y
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- Article
HarmonizR: blocking and singular feature data adjustment improve runtime efficiency and data preservation.
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- BMC Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12859-025-06073-9
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- Article
HGATLink: single-cell gene regulatory network inference via the fusion of heterogeneous graph attention networks and transformer.
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- BMC Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12859-025-06071-x
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- Article
Mammalian piRNA target prediction using a hierarchical attention model.
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- BMC Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12859-025-06068-6
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- Article
A hybrid machine learning framework for functional annotation of mitochondrial glutathione transport and metabolism proteins in cancers.
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- BMC Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12859-025-06051-1
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- Article
SEGT-GO: a graph transformer method based on PPI serialization and explanatory artificial intelligence for protein function prediction.
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- BMC Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12859-025-06059-7
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- Article
Conditional similarity triplets enable covariate-informed representations of single-cell data.
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- BMC Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12859-025-06069-5
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- Article
HDN-DDI: a novel framework for predicting drug-drug interactions using hierarchical molecular graphs and enhanced dual-view representation learning.
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- BMC Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12859-025-06052-0
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- Article
TockyPrep: data preprocessing methods for flow cytometric fluorescent timer analysis.
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- BMC Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12859-025-06058-8
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- Article
Correction: HISS: Snakemake-based workflows for performing SMRT-RenSeq assembly, AgRenSeq and dRenSeq for the discovery of novel plant disease resistance genes.
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- 2025
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- Correction Notice
Omilayers: a Python package for efficient data management to support multi-omic analysis.
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- BMC Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12859-025-06067-7
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- Article
Instance-level semantic segmentation of nuclei based on multimodal structure encoding: Instance-level semantic segmentation of nuclei based on multimodal...: B. Guan et al.
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- BMC Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12859-025-06066-8
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- Article
Direct coupling analysis and the attention mechanism: Direct Coupling...: F. Caredda, A. Pagnani.
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- BMC Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12859-025-06062-y
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- Article
AMEND 2.0: module identification and multi-omic data integration with multiplex-heterogeneous graphs.
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- BMC Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12859-025-06063-x
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- Publication type:
- Article
CellMAP: an open-source software tool to batch-process cell topography and stiffness maps collected with an atomic force microscope.
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- BMC Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12859-025-06060-0
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- Article
BioLake: an RNA expression analysis framework for prostate cancer biomarker powered by data lakehouse.
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- BMC Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12859-025-06050-2
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- Article
Accurate assembly of full-length consensus for viral quasispecies.
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- BMC Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12859-025-06045-z
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- Article
Flexible analysis of spatial transcriptomics data (FAST): a deconvolution approach.
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- BMC Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12859-025-06054-y
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- Article
Biomedical named entity recognition using improved green anaconda-assisted Bi-GRU-based hierarchical ResNet model.
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- BMC Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12859-024-06008-w
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- Article
scSMD: a deep learning method for accurate clustering of single cells based on auto-encoder.
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- BMC Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12859-025-06047-x
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- Article
Metadag: a web tool to generate and analyse metabolic networks.
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- BMC Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12859-025-06048-w
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- Article
Marigold: a machine learning-based web app for zebrafish pose tracking.
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- BMC Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12859-025-06042-2
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- Article
Correcting scale distortion in RNA sequencing data: Correcting Scale Distortion in RNA Sequencing Data: C.Thron, F.Jafari.
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- BMC Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12859-025-06041-3
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- Article
Hybrid generative adversarial network based on frequency and spatial domain for histopathological image synthesis.
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- BMC Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12859-025-06057-9
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- Article
SequenceCraft: machine learning-based resource for exploratory analysis of RNA-cleaving deoxyribozymes.
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- BMC Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12859-024-06019-7
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- Publication type:
- Article
HDN-DDI: a novel framework for predicting drug-drug interactions using hierarchical molecular graphs and enhanced dual-view representation learning.
- Published in:
- BMC Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12859-025-06052-0
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- Publication type:
- Article
BAC-browser: the tool for synthetic biology.
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- BMC Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12859-025-06049-9
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- Article
Joint embedding–classifier learning for interpretable collaborative filtering.
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- BMC Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12859-024-06026-8
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- Article
A comprehensive survey of scoring functions for protein docking models.
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- BMC Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12859-024-05991-4
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- Article
ClearFinder: a Python GUI for annotating cells in cleared mouse brain.
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- BMC Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12859-025-06039-x
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- Article
A graph neural network approach for hierarchical mapping of breast cancer protein communities.
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- BMC Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12859-024-06015-x
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- Article
Benchmarking cell type annotation methods for 10x Xenium spatial transcriptomics data.
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- BMC Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12859-025-06044-0
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- Publication type:
- Article
getphylo: rapid and automatic generation of multi-locus phylogenetic trees.
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- BMC Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12859-025-06035-1
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- Article
A multi-stage weakly supervised design for spheroid segmentation to explore mesenchymal stem cell differentiation dynamics.
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- BMC Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12859-024-06031-x
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- Article
MGATAF: multi-channel graph attention network with adaptive fusion for cancer-drug response prediction.
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- BMC Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12859-024-05987-0
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- Article
Zim4rv: an R package to modeling zero-inflated count phenotype on regional-based rare variants.
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- BMC Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12859-024-06029-5
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- Article
Predicting drug combination side effects based on a metapath-based heterogeneous graph neural network.
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- BMC Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12859-024-06028-6
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- Article
TopoQual polishes circular consensus sequencing data and accurately predicts quality scores.
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- BMC Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12859-024-06020-0
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- Article
Development of a TSR-based method for understanding structural relationships of cofactors and local environments in photosystem I.
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- BMC Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12859-025-06038-y
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- Publication type:
- Article
DTI-MHAPR: optimized drug-target interaction prediction via PCA-enhanced features and heterogeneous graph attention networks.
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- BMC Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12859-024-06021-z
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- Article
UniAMP: enhancing AMP prediction using deep neural networks with inferred information of peptides.
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- BMC Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1186/s12859-025-06033-3
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- Article