Works matching IS 14712105 AND DT 2018 AND VI 19 AND IP 18

Results: 18

Bidirectional long short-term memory with CRF for detecting biomedical event trigger in FastText semantic space.

Published in:

BMC Bioinformatics, 2018, v. 19, n. 18, p. 59, doi. 10.1186/s12859-018-2543-1

By:

Wang, Yan;
Wang, Jian;
Lin, Hongfei;
Tang, Xiwei;
Zhang, Shaowu;
Li, Lishuang

Publication type:

Article

Rapid analysis of metagenomic data using signature-based clustering.

Published in:

BMC Bioinformatics, 2018, v. 19, n. 18, p. 79, doi. 10.1186/s12859-018-2540-4

By:

Chappell, Timothy;
Geva, Shlomo;
Hogan, James M.;
Huygens, Flavia;
Rathnayake, Irani U.;
Rudd, Stephen;
Kelly, Wayne;
Perrin, Dimitri

Publication type:

Article

Detection and visualization of complex structural variants from long reads.

Published in:

BMC Bioinformatics, 2018, v. 19, n. 18, p. 67, doi. 10.1186/s12859-018-2539-x

By:

Stephens, Zachary;
Wang, Chen;
Iyer, Ravishankar K.;
Kocher, Jean-Pierre

Publication type:

Article

An SVM-based method for assessment of transcription factor-DNA complex models.

Published in:

BMC Bioinformatics, 2018, v. 19, n. 18, p. 49, doi. 10.1186/s12859-018-2538-y

By:

Corona, Rosario I.;
Sudarshan, Sanjana;
Aluru, Srinivas;
Guo, Jun-tao

Publication type:

Article

Nonlinear expression and visualization of nonmetric relationships in genetic diseases and microbiome data.

Published in:

BMC Bioinformatics, 2018, v. 19, n. 18, p. 37, doi. 10.1186/s12859-018-2537-z

By:

Zhu, Xianchao;
Shen, Xianjun;
Jiang, Xingpeng;
Wei, Kaiping;
He, Tingting;
Ma, Yuanyuan;
Liu, Jiaqi;
Hu, Xiaohua

Publication type:

Article

MicroRNA dysregulational synergistic network: discovering microRNA dysregulatory modules across subtypes in non-small cell lung cancers.

Published in:

BMC Bioinformatics, 2018, v. 19, n. 18, p. 25, doi. 10.1186/s12859-018-2536-0

By:

Tran, Nhat;
Abhyankar, Vinay;
Nguyen, KyTai;
Weidanz, Jon;
Gao, Jean

Publication type:

Article

Sequence-based bacterial small RNAs prediction using ensemble learning strategies.

Published in:

BMC Bioinformatics, 2018, v. 19, n. 18, p. 13, doi. 10.1186/s12859-018-2535-1

By:

Tang, Guifeng;
Shi, Jingwen;
Wu, Wenjian;
Yue, Xiang;
Zhang, Wen

Publication type:

Article

Biomedical semantic indexing by deep neural network with multi-task learning.

Published in:

BMC Bioinformatics, 2018, v. 19, n. 18, p. 1, doi. 10.1186/s12859-018-2534-2

By:

Du, Yongping;
Pan, Yunpeng;
Wang, Chencheng;
Ji, Junzhong

Publication type:

Article

Scalable deep text comprehension for Cancer surveillance on high-performance computing.

Published in:

BMC Bioinformatics, 2018, v. 19, n. 18, p. 99, doi. 10.1186/s12859-018-2511-9

By:

Qiu, John X.;
Yoon, Hong-Jun;
Srivastava, Kshitij;
Watson, Thomas P.;
Blair Christian, J.;
Ramanathan, Arvind;
Wu, Xiao C.;
Fearn, Paul A.;
Tourassi, Georgia D.

Publication type:

Article

High-throughput cancer hypothesis testing with an integrated PhysiCell-EMEWS workflow.

Published in:

BMC Bioinformatics, 2018, v. 19, n. 18, p. 81, doi. 10.1186/s12859-018-2510-x

By:

Ozik, Jonathan;
Collier, Nicholson;
Wozniak, Justin M.;
Macal, Charles;
Cockrell, Chase;
Friedman, Samuel H.;
Ghaffarizadeh, Ahmadreza;
Heiland, Randy;
An, Gary;
Macklin, Paul

Publication type:

Article

Predicting tumor cell line response to drug pairs with deep learning.

Published in:

BMC Bioinformatics, 2018, v. 19, n. 18, p. 71, doi. 10.1186/s12859-018-2509-3

By:

Xia, Fangfang;
Shukla, Maulik;
Brettin, Thomas;
Garcia-Cardona, Cristina;
Cohn, Judith;
Allen, Jonathan E.;
Maslov, Sergei;
Holbeck, Susan L.;
Doroshow, James H.;
Evrard, Yvonne A.;
Stahlberg, Eric A.;
Stevens, Rick L.

Publication type:

Article

CANDLE/Supervisor: a workflow framework for machine learning applied to cancer research.

Published in:

BMC Bioinformatics, 2018, v. 19, n. 18, p. 59, doi. 10.1186/s12859-018-2508-4

By:

Wozniak, Justin M.;
Jain, Rajeev;
Balaprakash, Prasanna;
Ozik, Jonathan;
Collier, Nicholson T.;
Bauer, John;
Xia, Fangfang;
Brettin, Thomas;
Stevens, Rick;
Mohd-Yusof, Jamaludin;
Cardona, Cristina Garcia;
Essen, Brian Van;
Baughman, Matthew

Publication type:

Article

Deep clustering of protein folding simulations.

Published in:

BMC Bioinformatics, 2018, v. 19, n. 18, p. 47, doi. 10.1186/s12859-018-2507-5

By:

Bhowmik, Debsindhu;
Gao, Shang;
Young, Michael T.;
Ramanathan, Arvind

Publication type:

Article

High-throughput binding affinity calculations at extreme scales.

Published in:

BMC Bioinformatics, 2018, v. 19, n. 18, p. 33, doi. 10.1186/s12859-018-2506-6

By:

Dakka, Jumana;
Turilli, Matteo;
Wright, David W.;
Zasada, Stefan J.;
Balasubramanian, Vivek;
Wan, Shunzhou;
Coveney, Peter V.;
Jha, Shantenu

Publication type:

Article

Real-time data analysis for medical diagnosis using FPGA-accelerated neural networks.

Published in:

BMC Bioinformatics, 2018, v. 19, n. 18, p. 19, doi. 10.1186/s12859-018-2505-7

By:

Sanaullah, Ahmed;
Yang, Chen;
Alexeev, Yuri;
Yoshii, Kazutomo;
Herbordt, Martin C.

Publication type:

Article

Sparse coding of pathology slides compared to transfer learning with deep neural networks.

Published in:

BMC Bioinformatics, 2018, v. 19, n. 18, p. 9, doi. 10.1186/s12859-018-2504-8

By:

Fischer, Will;
Moudgalya, Sanketh S.;
Cohn, Judith D.;
Nguyen, Nga T. T.;
Kenyon, Garrett T.

Publication type:

Article

CAT: computer aided triage improving upon the Bayes risk through ε-refusal triage rules.

Published in:

BMC Bioinformatics, 2018, v. 19, n. 18, p. 3, doi. 10.1186/s12859-018-2503-9

By:

Hengartner, Nicolas;
Cuellar, Leticia;
Wu, Xiao-Cheng;
Tourassi, Georgia;
Qiu, John;
Christian, Blair;
Bhattacharya, Tanmoy

Publication type:

Article

Computational approaches for Cancer 2017 workshop overview.

Published in:

BMC Bioinformatics, 2018, v. 19, n. 18, p. 1, doi. 10.1186/s12859-018-2502-x

By:

Chandrasekaran, Sunita;
Stahlberg, Eric

Publication type:

Article