Works matching IS 14712105 AND DT 2012 AND VI 13 AND IP Suppl 10

Results: 20

Predicting multiplex subcellular localization of proteins using protein-protein interaction network: a comparative study.

Published in:

BMC Bioinformatics, 2012, v. 13, n. Suppl 10, p. 1, doi. 10.1186/1471-2105-13-S10-S20

By:

Jiang, Jonathan Q.;
Maoying Wu

Publication type:

Article

Efficient and accurate greedy search methods for mining functional modules in protein interaction networks.

Published in:

BMC Bioinformatics, 2012, v. 13, n. Suppl 10, p. 1, doi. 10.1186/1471-2105-13-S10-S19

By:

Jieyue He;
Chaojun Li;
Baoliu Ye;
Wei Zhong

Publication type:

Article

A methodology for detecting the orthology signal in a PPI network at a functional complex level.

Published in:

BMC Bioinformatics, 2012, v. 13, n. Suppl 10, p. 1, doi. 10.1186/1471-2105-13-S10-S18

By:

Jancura, Pavol;
Mavridou, Eleftheria;
Pau, Enrique Carrillo-de Santa;
Marchiori, Elena

Publication type:

Article

Gene network modular-based classification of microarray samples.

Published in:

BMC Bioinformatics, 2012, v. 13, n. Suppl 10, p. 1, doi. 10.1186/1471-2105-13-S10-S17

By:

Pingzhao Hu;
Bull, Shelley B.;
Hui Jiang

Publication type:

Article

Exploring biological interaction networks with tailored weighted quasi-bicliques.

Published in:

BMC Bioinformatics, 2012, v. 13, n. Suppl 10, p. 1, doi. 10.1186/1471-2105-13-S10-S16

By:

Wen-Chieh Chang;
Vakati, Sudheer;
Krause, Roland;
Eulenstein, Oliver

Publication type:

Article

Comparative evaluation of set-level techniques in predictive classification of gene expression samples.

Published in:

BMC Bioinformatics, 2012, v. 13, n. Suppl 10, p. 1, doi. 10.1186/1471-2105-13-S10-S15

By:

Holec, Matej;
Kléma, Jirí;
Železný, Filip;
Tolar, Jakub

Publication type:

Article

Algorithms: simultaneous error-correction and rooting for gene tree reconciliation and the gene duplication problem.

Published in:

BMC Bioinformatics, 2012, v. 13, n. Suppl 10, p. 1, doi. 10.1186/1471-2105-13-S10-S14

By:

Górecki, Pawel;
Eulenstein, Oliver

Publication type:

Article

Horizontal gene transfer dynamics and distribution of fitness effects during microbial in silico evolution.

Published in:

BMC Bioinformatics, 2012, v. 13, n. Suppl 10, p. 1, doi. 10.1186/1471-2105-13-S10-S13

By:

Mozhayskiy, Vadim;
Tagkopoulos, Ilias

Publication type:

Article

Consensus properties for the deep coalescence problem and their application for scalable tree search.

Published in:

BMC Bioinformatics, 2012, v. 13, n. Suppl 10, p. 1, doi. 10.1186/1471-2105-13-S10-S12

By:

Lin, Harris T.;
Burleigh, J. Gordon;
Eulenstein, Oliver

Publication type:

Article

Efficient error correction algorithms for gene tree reconciliation based on duplication, duplication and loss, and deep coalescence.

Published in:

BMC Bioinformatics, 2012, v. 13, n. Suppl 10, p. 1, doi. 10.1186/1471-2105-13-S10-S11

By:

Chaudhary, Ruchi;
Burleigh, J. Gordon;
Eulenstein, Oliver

Publication type:

Article

Guided evolution of in silico microbial populations in complex environments accelerates evolutionary rates through a step-wise adaptation.

Published in:

BMC Bioinformatics, 2012, v. 13, n. Suppl 10, p. 1, doi. 10.1186/1471-2105-13-S10-S10

By:

Mozhayskiy, Vadim;
Tagkopoulos, Ilias

Publication type:

Article

Gene order in rosid phylogeny, inferred from pairwise syntenies among extant genomes.

Published in:

BMC Bioinformatics, 2012, v. 13, n. Suppl 10, p. 1, doi. 10.1186/1471-2105-13-S10-S9

By:

Chunfang Zheng;
Sankoff, David

Publication type:

Article

Genome plasticity and systems evolution in Streptomyces.

Published in:

BMC Bioinformatics, 2012, v. 13, n. Suppl 10, p. 1, doi. 10.1186/1471-2105-13-S10-S8

By:

Zhan Zhou;
Jianying Gu;
Yong-Quan Li;
Yufeng Wang

Publication type:

Article

A systematic comparison of genome-scale clustering algorithms.

Published in:

BMC Bioinformatics, 2012, v. 13, n. Suppl 10, p. 1, doi. 10.1186/1471-2105-13-S10-S7

By:

Jay, Jeremy J.;
Eblen, John D. J.;
Yun Zhang;
Benson, Mikael;
Perkins, Andy D. J.;
Saxton, Arnold M. J.;
Voy, Brynn H. J.;
Chesler, Elissa J. J.;
Langston, Michael A. J.

Publication type:

Article

Efficient error correction for next-generation sequencing of viral amplicons.

Published in:

BMC Bioinformatics, 2012, v. 13, n. Suppl 10, p. 1, doi. 10.1186/1471-2105-13-S10-S6

By:

Skums, Pavel;
Dimitrova, Zoya;
Campo, David S.;
Vaughan, Gilberto;
Rossi, Livia;
Forbi, Joseph C.;
Yokosawa, Jonny;
Zelikovsky, Alex;
Khudyakov, Yury

Publication type:

Article

The maximum clique enumeration problem: algorithms, applications, and implementations.

Published in:

BMC Bioinformatics, 2012, v. 13, n. Suppl 10, p. 1, doi. 10.1186/1471-2105-13-S10-S5

By:

Eblen, John D.;
Phillips, Charles A.;
Rogers, Gary L.;
Langston, Michael A.

Publication type:

Article

High-performance blob-based iterative three-dimensional reconstruction in electron tomography using multi-GPUs.

Published in:

BMC Bioinformatics, 2012, v. 13, n. Suppl 10, p. 1, doi. 10.1186/1471-2105-13-S10-S4

By:

Xiaohua Wan;
Fa Zhang;
Qi Chu;
Zhiyong Liu

Publication type:

Article

Prediction of DNA-binding propensity of proteins by the ball-histogram method using automatic template search.

Published in:

BMC Bioinformatics, 2012, v. 13, n. Suppl 10, p. 1, doi. 10.1186/1471-2105-13-S10-S3

By:

Szabóová, Andrea;
Kuželka, Ondřej;
Železný, Filip;
Tolar, Jakub

Publication type:

Article

Computing the protein binding sites.

Published in:

BMC Bioinformatics, 2012, v. 13, n. Suppl 10, p. 1, doi. 10.1186/1471-2105-13-S10-S2

By:

Fei Guo;
Lusheng Wang

Publication type:

Article

Guest Editors' Introduction.

Published in:

BMC Bioinformatics, 2012, v. 13, n. Suppl 10, p. 1, doi. 10.1186/1471-2105-13-S10-S1

By:

Chen, Jianer;
Măndoiu, Ion;
Sunderraman, Raj;
Jianxin Wang;
Zelikovsky, Alexander

Publication type:

Article