Works matching IS 14712105 AND DT 2011 AND VI 12 AND IP Suppl 8

Results: 13

Detection of interaction articles and experimental methods in biomedical literature.

Published in:

BMC Bioinformatics, 2011, v. 12, n. Suppl 8, p. 1, doi. 10.1186/1471-2105-12-S8-S13

By:

Schneider, Gerold;
Clematide, Simon;
Rinaldi, Fabio

Publication type:

Article

A linear classifier based on entity recognition tools and a statistical approach to method extraction in the protein-protein interaction literature.

Published in:

BMC Bioinformatics, 2011, v. 12, n. Suppl 8, p. 1, doi. 10.1186/1471-2105-12-S8-S12

By:

Lourenço, Anália;
Conover, Michael;
Wong, Andrew;
Nematzadeh, Azadeh;
Pan, Fengxia;
Shatkay, Hagit;
Luis M Rocha

Publication type:

Article

Detecting experimental techniques and selecting relevant documents for protein-protein interactions from biomedical literature.

Published in:

BMC Bioinformatics, 2011, v. 12, n. Suppl 8, p. 1, doi. 10.1186/1471-2105-12-S8-S11

By:

Wang, Xinglong;
Rak, Rafal;
Restificar, Angelo;
Nobata, Chikashi;
Rupp, C.J.;
Batista-Navarro, Riza Theresa B.;
Nawaz, Raheel;
Ananiadou, Sophia

Publication type:

Article

Simple and efficient machine learning frameworks for identifying protein-protein interaction relevant articles and experimental methods used to study the interactions.

Published in:

BMC Bioinformatics, 2011, v. 12, n. Suppl 8, p. 1, doi. 10.1186/1471-2105-12-S8-S10

By:

Agarwal, Shashank;
Liu, Feifan;
Yu, Hong

Publication type:

Article

Classifying protein-protein interaction articles using word and syntactic features.

Published in:

BMC Bioinformatics, 2011, v. 12, n. Suppl 8, p. 1, doi. 10.1186/1471-2105-12-S8-S9

By:

Sun Kim;
Wilbur, W. John

Publication type:

Article

Benchmarking of the 2010 BioCreative Challenge III text-mining competition by the BioGRID and MINT interaction databases.

Published in:

BMC Bioinformatics, 2011, v. 12, n. Suppl 8, p. 1, doi. 10.1186/1471-2105-12-S8-S8

By:

Chatr-aryamontri, Andrew;
Winter, Andrew;
Perfetto, Livia;
Briganti, Leonardo;
Licata, Luana;
Iannuccelli, Marta;
Castagnoli, Luisa;
Cesareni, Gianni;
Tyers, Mike

Publication type:

Article

Multi-stage gene normalization for full-text articles with context-based species filtering for dynamic dictionary entry selection.

Published in:

BMC Bioinformatics, 2011, v. 12, n. Suppl 8, p. 1, doi. 10.1186/1471-2105-12-S8-S7

By:

Tsai, Richard Tzong-Han;
Lai, Po-Ting

Publication type:

Article

Soft tagging of overlapping high confidence gene mention variants for cross-species full-text gene normalization.

Published in:

BMC Bioinformatics, 2011, v. 12, n. Suppl 8, p. 1, doi. 10.1186/1471-2105-12-S8-S6

By:

Kuo, Cheng-Ju;
Ling, Maurice HT;
Hsu, Chun-Nan

Publication type:

Article

Cross-species gene normalization by species inference.

Published in:

BMC Bioinformatics, 2011, v. 12, n. Suppl 8, p. 1, doi. 10.1186/1471-2105-12-S8-S5

By:

Wei, Chih-Hsuan;
Kao, Hung-Yu

Publication type:

Article

BioCreative III interactive task: an overview.

Published in:

BMC Bioinformatics, 2011, v. 12, n. Suppl 8, p. 1, doi. 10.1186/1471-2105-12-S8-S4

By:

Arighi, Cecilia N;
Roberts, Phoebe M;
Agarwal, Shashank;
Bhattacharya, Sanmitra;
Cesareni, Gianni;
Chatr-aryamontri, Andrew;
Clematide, Simon;
Gaudet, Pascale;
Giglio, Michelle Gwinn;
Harrow, Ian;
Huala, Eva;
Krallinger, Martin;
Leser, Ulf;
Li, Donghui;
Liu, Feifan;
Lu, Zhiyong;
Maltais, Lois J;
Okazaki, Naoaki;
Perfetto, Livia;
Rinaldi, Fabio

Publication type:

Article

The Protein-Protein Interaction tasks of BioCreative III: classification/ranking of articles and linking bio-ontology concepts to full text.

Published in:

BMC Bioinformatics, 2011, v. 12, n. Suppl 8, p. 1, doi. 10.1186/1471-2105-12-S8-S3

By:

Krallinger, Martin;
Vazquez, Miguel;
Leitner, Florian;
Salgado, David;
Chatr-aryamontri, Andrew;
Winter, Andrew;
Perfetto, Livia;
Briganti, Leonardo;
Licata, Luana;
Iannuccelli, Marta;
Castagnoli, Luisa;
Cesareni, Gianni;
Tyers, Mike;
Schneider, Gerold;
Rinaldi, Fabio;
Leaman, Robert;
Gonzalez, Graciela;
Matos, Sergio;
Kim, Sun;
Wilbur, W John

Publication type:

Article

The gene normalization task in BioCreative III.

Published in:

BMC Bioinformatics, 2011, v. 12, n. Suppl 8, p. 1, doi. 10.1186/1471-2105-12-S8-S2

By:

Lu, Zhiyong;
Kao, Hung-Yu;
Wei, Chih-Hsuan;
Huang, Minlie;
Liu, Jingchen;
Kuo, Cheng-Ju;
Hsu, Chun-Nan;
Tsai, Richard Tzong-Han;
Dai, Hong-Jie;
Okazaki, Naoaki;
Cho, Han-Cheol;
Gerner, Martin;
Solt, Illes;
Agarwal, Shashank;
Liu, Feifan;
Vishnyakova, Dina;
Ruch, Patrick;
Romacker, Martin;
Rinaldi, Fabio;
Bhattacharya, Sanmitra

Publication type:

Article

Overview of the BioCreative III Workshop.

Published in:

BMC Bioinformatics, 2011, v. 12, n. Suppl 8, p. 1, doi. 10.1186/1471-2105-12-S8-S1

By:

Arighi, Cecilia N.;
Lu, Zhiyong;
Krallinger, Martin;
Cohen, Kevin B.;
Wilbur, W. John;
Valencia, Alfonso;
Hirschman, Lynette;
Wu, Cathy H.

Publication type:

Article