Works matching IS 14712105 AND DT 2009 AND VI 10

Results: 729

HypertenGene: extracting key hypertension genes from biomedical literature with position and automatically-generated template features.

Published in:

BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-S15-S9

By:

Tzong-Han Tsai, Richard;
Po-Ting Lai;
Hong-Jie Dai;
Chi-Hsin Huang;
Yue-Yang Bow;
Yen-Ching Chang;
Wen-Harn Pan;
Wen-Lian Hsu

Publication type:

Article

Protein subcellular localization prediction of eukaryotes using a knowledge-based approach.

Published in:

BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-S15-S8

By:

Hsin-Nan Lin;
Ching-Tai Chen;
Ting-Yi Sung;
Shinn-Ying Ho;
Wen-Lian Hsu

Publication type:

Article

BIOADI: a machine learning approach to identifying abbreviations and definitions in biological literature.

Published in:

BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-S15-S7

By:

Cheng-Ju Kuo;
Maurice H. T. Ling;
Kuan-Ting Lin;
Chun-Nan Hsu

Publication type:

Article

Modulation of p53 binding to MDM2: computational studies reveal important roles of Tyr100.

Published in:

BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-S15-S6

By:

Dastidar, Shubhra Ghosh;
Lane, David P.;
Verma, Chandra S.

Publication type:

Article

Protein comparison at the domain architecture level.

Published in:

BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-S15-S5

By:

Byungwook Lee;
Doheon Lee

Publication type:

Article

Sub-population analysis based on temporal features of high content images.

Published in:

BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-S15-S4

By:

Veronika, Merlin;
Evans, James;
Matsudaira, Paul;
Welsch, Roy;
Rajapakse, Jagath

Publication type:

Article

Gevab: a prototype genome variation analysis browsing server.

Published in:

BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-S15-S3

By:

Woo-Yeon Kim;
Sang-Yoon Kim;
Tae-Hyung Kim;
Sung-Min Ahn;
Ha Na Byun;
Deokhoon Kim;
Dae-Soo Kim;
Yong Seok Lee;
Ho Ghang;
Daeui Park;
Byoung-Chul Kim;
Chulhong Kim;
Sunghoon Lee;
Seong-Jin Kim;
Jong Bhak

Publication type:

Article

A comprehensive assessment of N-terminal signal peptides prediction methods.

Published in:

BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-S15-S2

By:

Khar Heng Choo;
Tin Wee Tan;
Ranganathan, Shoba

Publication type:

Article

The implementation of e-learning tools to enhance undergraduate bioinformatics teaching and learning: a case study in the National University of Singapore.

Published in:

2009

By:

Shen Jean Lim;
Khan, Asif Mohammad;
De Silva, Mark;
Kuan Siong Lim;
Yongli Hu;
Chay Hoon Tan;
Tin Wee Tan

Publication type:

Case Study

The Korean Bird Information System (KBIS) through open and public participation.

Published in:

BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-S15-S11

By:

In-Hwan Paik;
Jeongheui Lim;
Byung-Sun Chun;
Seon-Duck Jin;
Jae-Pyoung Yu;
Joon-Woo Lee;
Jong Bhak;
Woon-Kee Paek

Publication type:

Article

Physiochemical property space distribution among human metabolites, drugs and toxins.

Published in:

BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-S15-S10

By:

Khanna, Varun;
Ranganathan, Shoba

Publication type:

Article

Towards a career in bioinformatics.

Published in:

2009

By:

Ranganathan, Shoba

Publication type:

Proceeding

Efficient alignment-free DNA barcode analytics.

Published in:

BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-S14-S9

By:

Kuksa, Pavel;
Pavlovic, Vladimir

Publication type:

Article

Rapid DNA barcoding analysis of large datasets using the composition vector method.

Published in:

BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-S14-S8

By:

Ka Hou Chu;
Minli Xu;
Chi Pang Li

Publication type:

Article

Learning to classify species with barcodes.

Published in:

BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-S14-S7

By:

Bertolazzi, Paola;
Felici, Giovanni;
Weitschek, Emanuel

Publication type:

Article

Scratchpads: a data-publishing framework to build, share and manage information on the diversity of life.

Published in:

BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-S14-S6

By:

Smith, Vincent S.;
Rycroft, Simon D.;
Harman, Kehan T.;
Scott, Ben;
Roberts, David

Publication type:

Article

bioGUID: resolving, discovering, and minting identifiers for biodiversity informatics.

Published in:

BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-S14-S5

By:

Page, Roderic D. M.

Publication type:

Article

Googling DNA sequences on the World Wide Web.

Published in:

BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-S14-S4

By:

Hajibabaei, Mehrdad;
Singer, Gregory A. C.

Publication type:

Article

Location, location, location: utilizing pipelines and services to more effectively georeference the world's biodiversity data.

Published in:

BMC Bioinformatics, 2009, v. 10, p. 1

By:

Hill, Andrew W.;
Guralnick, Robert;
Flemons, Paul;
Beaman, Reed;
Wieczorek, John;
Ranipeta, Ajay;
Chavan, Vishwas;
Remsen, David

Publication type:

Article

Towards a data publishing framework for primary biodiversity data: challenges and potentials for the biodiversity informatics community.

Published in:

BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-S14-S2

By:

Chavan, Vishwas S.;
Ingwersen, Peter

Publication type:

Article

DNA barcode analysis: a comparison of phylogenetic and statistical classification methods.

Published in:

BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-S14-S10

By:

Austerlitz, Frederic;
David, Olivier;
Schaeffer, Brigitte;
Bleakley, Kevin;
Olteanu, Madalina;
Leblois, Raphael;
Veuille, Michel;
Laredo, Catherine

Publication type:

Article

Biodiversity Informatics: the emergence of a field.

Published in:

BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-S14-S1

By:

Sarkar, Indra Neil

Publication type:

Article

Abstracts from the 5th International Society for Computational Biology Student Council Symposium at the 17th Annual International Conference on Intelligent Systems for Molecular Biology and the 8th European Conference on Computational Biology. June 27, 2009. Stockholm, Sweden.

Published in:: 2009
Publication type:: Abstract

Computational methods to identify novel methyltransferases.

Published in:

BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-S13-P7

By:

Petrossian, Tanya C.;
Clarke, Steven G.

Publication type:

Article

Structure and function analysis of flexible alignment regions in proteins.

Published in:

BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-S13-P6

By:

Pirovano, Walter;
Van der Reijden, Anneke;
Feenstra, K. Anton;
Heringa, Jaap

Publication type:

Article

Transcript quantification with RNA-Seq data.

Published in:

BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-S13-P5

By:

Bohnert, Regina;
Behr, Jonas;
Rätsch, Gunnar

Publication type:

Article

Phylogenomic inference of functional divergence.

Published in:

BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-S13-P4

By:

Williams, Tom A.;
Caffrey, Brian E.;
Xiaowei Jiang;
Toft, Christina;
Fares, Mario A.

Publication type:

Article

A method for validation for clustering of phenotypic gene knockdown profiles using protein-protein interactions information.

Published in:

BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-S13-P3

By:

Samusik, Nikolay;
Kalaidzidis, Yannis;
Zerial, Marino

Publication type:

Article

PAUL: protein structural alignment using integer linear programming and Lagrangian relaxation.

Published in:

BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-S13-P2

By:

Wohlers, Inken;
Petzold, Lars;
Domingues, Francisco S.;
Klau, Gunnar W.

Publication type:

Article

Probabilistic retrieval and visualization of biologically relevant microarray experiments.

Published in:

BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-S13-P1

By:

Caldas, José;
Gehlenborg, Nils;
Faisal, Ali;
Brazma, Alvis;
Kaski, Samuel

Publication type:

Article

Visualization of large microarray experiments with space maps.

Published in:

BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-S13-O7

By:

Gehlenborg, Nils;
Brazma, Alvis

Publication type:

Article

Looking for chromosome spatial organization rules in microarray gene expression data.

Published in:

BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-S13-O6

By:

Szczepińska, Teresa;
Pawłowski, Krzysztof

Publication type:

Article

Functionally informative tag SNP selection using a pareto-optimal approach: playing the game of life.

Published in:

BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-S13-O5

By:

Phil Hyoun Lee;
Jae-Yoon Jung;
Hagit Shatkay

Publication type:

Article

Core stemness mechanisms revealed through homology.

Published in:

BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-S13-O4

By:

Koeva, Martina;
Forsberg, E. Camilla;
Stuart, Josh M.

Publication type:

Article

Identification of functionally related genes using data mining and data integration: a breast cancer case study.

Published in:

2009

By:

Mosca, Ettore;
Bertoli, Gloria;
Piscitelli, Eleonora;
Vilardo, Laura;
Reinbold, Rolland A.;
Zucchi, Ileana;
Milanesi, Luciano

Publication type:

Case Study

XML-based approaches for the integration of heterogeneous bio-molecular data.

Published in:

BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-S12-S7

By:

Mesiti, Marco;
Jiménez-Ruiz, Ernesto;
Sanz, Ismael;
Berlanga-Llavori, Rafael;
Perlasca, Paolo;
Valentini, Giorgio;
Manset, David

Publication type:

Article

KIRMES: kernel-based identification of regulatory modules in euchromatic sequences.

Published in:

BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-S13-O1

By:

Schultheiss, Sebastian J.;
Busch, Wolfgang;
Lohmann, Jan;
Kohlbacher, Oliver;
Rätsch, Gunnar

Publication type:

Article

Highlights from the 5th International Society for Computational Biology Student Council Symposium at the 17th Annual International Conference on Intelligent Systems for Molecular Biology and the 8th European Conference on Computational Biology.

Published in:

BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-S13-I1

By:

Abeel, Thomas;
De Ridder, Jeroen;
Peixoto, Lucia

Publication type:

Article

A scale space approach for unsupervised feature selection in mass spectra classification for ovarian cancer detection.

Published in:

BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-S12-S9

By:

Ceccarelli, Michele;
D'Acierno, Antonio;
Facchiano, Angelo

Publication type:

Article

Prediction of super-secondary structure in α-helical and β-barrel transmembrane proteins.

Published in:

BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-S13-O3

By:

Du Tran, Van;
Chassignet, Philippe;
Steyaert, Jean-Marc

Publication type:

Article

Paired-end read length lower bounds for genome re-sequencing.

Published in:

BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-S13-O2

By:

Chikhi, Rayan;
Lavenier, Dominique

Publication type:

Article

Clinical bioinformatics for complex disorders: a schizophrenia case study.

Published in:

2009

By:

Schwarz, Emanuel;
Leweke, F. Markus;
Bahn, Sabine;
Liò, Pietro

Publication type:

Case Study

Phenotypic and genotypic data integration and exploration through a web-service architecture.

Published in:

BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-S12-S5

By:

Nuzzo, Angelo;
Riva, Alberto;
Bellazzi, Riccardo

Publication type:

Article

Developing optimal input design strategies in cancer systems biology with applications to microfluidic device engineering.

Published in:

BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-S12-S4

By:

Menolascina, Filippo;
Bellomo, Domenico;
Maiwald, Thomas;
Bevilacqua, Vitoantonio;
Ciminelli, Caterina;
Paradiso, Angelo;
Tommasi, Stefania

Publication type:

Article

In silico saturation mutagenesis and docking screening for the analysis of protein-ligand interaction: the Endothelial Protein C Receptor case study.

Published in:

2009

By:

Chiappori, Federica;
D'Ursi, Pasqualina;
Merelli, Ivan;
Milanesi, Luciano;
Rovida, Ermanna

Publication type:

Case Study

The Human EST Ontology Explorer: a tissue-oriented visualization system for ontologies distribution in human EST collections.

Published in:

BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-S12-S2

By:

Merelli, Ivan;
Caprera, Andrea;
Stella, Alessandra;
Del Corvo, Marcello;
Milanesi, Luciano;
Lazzari, Barbara

Publication type:

Article

Protopia: a protein-protein interaction tool.

Published in:

BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-S12-S17

By:

Real-Chicharro, Alejandro;
Ruiz-Mostazo, Iván;
Navas-Delgado, Ismael;
Kerzazi, Amine;
Chniber, Othmane;
Sánchez-Jiménez, Francisca;
Medina, Miguel Ángel;
Aldana-Montes, José F.

Publication type:

Article

Towards a systems biology approach to mammalian cell cycle: modeling the entrance into S phase of quiescent fibroblasts after serum stimulation.

Published in:

BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-S12-S16

By:

Alfieri, Roberta;
Barberis, Matteo;
Chiaradonna, Ferdinando;
Gaglio, Daniela;
Milanesi, Luciano;
Vanoni, Marco;
Klipp, Edda;
Alberghina, Lilia

Publication type:

Article

Extraction, integration and analysis of alternative splicing and protein structure distributed information.

Published in:

BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-S12-S15

By:

D'Antonio, Matteo;
Masseroli, Marco

Publication type:

Article

A computational framework for qualitative simulation of nonlinear dynamical models of gene-regulatory networks.

Published in:

BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-S12-S14

By:

Ironi, Liliana;
Panzeri, Luigi

Publication type:

Article