A new pairwise kernel for biological network inference with supportvector machines.
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. S8, doi. 10.1186/1471-2105-8-S10-S8
- Publication type:
- Article
Works matching IS 14712105 AND DT 2007 AND VI 8
Results: 707
1
2
Accurate splice site prediction using support vector machines.
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. S7, doi. 10.1186/1471-2105-8-S10-S7
- Publication type:
- Article
3
A mixture of feature experts approach for protein-proteininteraction prediction.
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. S6, doi. 10.1186/1471-2105-8-S10-S6
- Publication type:
- Article
4
Analyzing in situ gene expression in the mouse brain with imageregistration, feature extraction and block clustering.
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. S5, doi. 10.1186/1471-2105-8-S10-S5
- Publication type:
- Article
5
Time-series alignment by non-negative multiple generalizedcanonical correlation analysis.
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. S4, doi. 10.1186/1471-2105-8-S10-S4
- Publication type:
- Article
6
Semi-supervised learning for the identification of syn-expressedgenes from fused microarray and in situ image data.
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. S3, doi. 10.1186/1471-2105-8-S10-S3
- Publication type:
- Article
7
Prediction of tissue-specific cis-regulatory modules using Bayesiannetworks and regression trees.
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. S2, doi. 10.1186/1471-2105-8-S10-S2
- Publication type:
- Article
8
MetaLook: a 3D visualisation software for marine ecologicalgenomics.
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. 406, doi. 10.1186/1471-2105-8-406
- Publication type:
- Article
9
CATMA, a comprehensive genome-scale resource for silencing andtranscript profiling of Arabidopsis genes.
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. 400, doi. 10.1186/1471-2105-8-400
- Publication type:
- Article
10
Large scale clustering of protein sequences with FORCE -A layoutbased heuristic for weighted cluster editing.
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. 396, doi. 10.1186/1471-2105-8-396
- Publication type:
- Article
11
On the detection of functionally coherent groups of proteindomains with an extension to protein annotation.
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. 390, doi. 10.1186/1471-2105-8-390
- Publication type:
- Article
12
Topology independent protein structural alignment.
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. 388, doi. 10.1186/1471-2105-8-388
- Publication type:
- Article
13
Investigations into the relationship between feedback loops andfunctional importance of a signal transduction network based onBoolean network modeling.
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. 384, doi. 10.1186/1471-2105-8-384
- Publication type:
- Article
14
ProbCD: enrichment analysis accounting for categorizationuncertainty.
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. 383, doi. 10.1186/1471-2105-8-383
- Publication type:
- Article
15
PFAAT version 2.0: A tool for editing, annotating, and analyzingmultiple sequence alignments.
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. 381, doi. 10.1186/1471-2105-8-381
- Publication type:
- Article
16
Detailed estimation of bioinformatics prediction reliability throughthe Fragmented Prediction Performance Plots.
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. 380, doi. 10.1186/1471-2105-8-380
- Publication type:
- Article
17
Computational analysis of the relationship between allergenicityand digestibility of allergenic proteins in simulated gastric fluid.
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. 375, doi. 10.1186/1471-2105-8-375
- Publication type:
- Article
18
Genes2Networks: connecting lists of gene symbols usingmammalian protein interactions databases.
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. 372, doi. 10.1186/1471-2105-8-372
- Publication type:
- Article
19
Gene selection for classification of microarray data based on theBayes error.
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. 370, doi. 10.1186/1471-2105-8-370
- Publication type:
- Article
20
Assessment of algorithms for high throughput detection of genomiccopy number variation in oligonucleotide microarray data.
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. 368, doi. 10.1186/1471-2105-8-368
- Publication type:
- Article
21
RNAspa: a shortest path approach for comparative prediction ofthe secondary structure of ncRNA molecules.
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. 366, doi. 10.1186/1471-2105-8-366
- Publication type:
- Article
22
Estimation of the number of extreme pathways for metabolicnetworks.
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. 363, doi. 10.1186/1471-2105-8-363
- Publication type:
- Article
23
Linking microarray reporters with protein functions.
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. 360, doi. 10.1186/1471-2105-8-360
- Publication type:
- Article
24
An evolutionary method for learning HMM structure: prediction ofprotein secondary structure.
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. 357, doi. 10.1186/1471-2105-8-357
- Publication type:
- Article
25
Accuracy of structure-based sequence alignment of automaticmethods.
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. 355, doi. 10.1186/1471-2105-8-355
- Publication type:
- Article
26
Prediction of potential drug targets based on simple sequenceproperties.
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. 353, doi. 10.1186/1471-2105-8-353
- Publication type:
- Article
27
Tandem mass spectrometry data quality assessment byself-convolution.
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. 352, doi. 10.1186/1471-2105-8-352
- Publication type:
- Article
28
Selection of long oligonucleotides for gene expression microarraysusing weighted rank-sum strategy.
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. 350, doi. 10.1186/1471-2105-8-350
- Publication type:
- Article
29
A cross-species alignment tool (CAT).
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. 349, doi. 10.1186/1471-2105-8-349
- Publication type:
- Article
30
A unified framework for finding differentially expressed genes frommicroarray experiments.
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. 347, doi. 10.1186/1471-2105-8-347
- Publication type:
- Article
31
Predicting state transitions in the transcriptome and metabolomeusing a linear dynamical system model.
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. 343, doi. 10.1186/1471-2105-8-343
- Publication type:
- Article
32
A replica exchange Monte Carlo algorithm for protein folding in theHP model.
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. 342, doi. 10.1186/1471-2105-8-342
- Publication type:
- Article
33
Impact of image segmentation on high-content screening dataquality for SK-BR-3 cells.
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. 340, doi. 10.1186/1471-2105-8-340
- Publication type:
- Article
34
Support Vector Machine-based method for predicting subcellularlocalization of mycobacterial proteins using evolutionaryinformation and motifs.
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. 337, doi. 10.1186/1471-2105-8-337
- Publication type:
- Article
35
PathFinder: mining signal transduction pathway segments fromprotein-protein interaction networks.
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. 335, doi. 10.1186/1471-2105-8-335
- Publication type:
- Article
36
EDISA: extracting biclusters from multiple time-series of geneexpression profiles.
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. 334, doi. 10.1186/1471-2105-8-334
- Publication type:
- Article
37
A novel approach to detect hot-spots in large-scale multivariatedata.
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. 331, doi. 10.1186/1471-2105-8-331
- Publication type:
- Article
38
Protein subcellular localization prediction based oncompartment-specific features and structure conservation.
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. 330, doi. 10.1186/1471-2105-8-330
- Publication type:
- Article
39
Gene analogue finder: a GRID solution for finding functionallyanalogous gene products.
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. 329, doi. 10.1186/1471-2105-8-329
- Publication type:
- Article
40
BIOSMILE: A semantic role labeling system for biomedical verbsusing a maximum-entropy model with automatically generatedtemplate features.
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. 325, doi. 10.1186/1471-2105-8-325
- Publication type:
- Article
41
Optimization of filtering criterion for SEQUEST database searchingto improve proteome coverage in shotgun proteomics.
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. 323, doi. 10.1186/1471-2105-8-323
- Publication type:
- Article
42
Automatic generation of 3D motifs for classification of proteinbinding sites.
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. 321, doi. 10.1186/1471-2105-8-321
- Publication type:
- Article
43
AUG--hairpin: prediction of a downstream secondary structureinfluencing the recognition of a translation start site.
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. 318, doi. 10.1186/1471-2105-8-318
- Publication type:
- Article
44
A statistical method to incorporate biological knowledge forgenerating testable novel gene regulatory interactions frommicroarray experiments.
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. 317, doi. 10.1186/1471-2105-8-317
- Publication type:
- Article
45
A comprehensive system for evaluation of remote sequencesimilarity detection.
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. 314, doi. 10.1186/1471-2105-8-314
- Publication type:
- Article
46
Integrated network reconstruction, visualization and analysis usingYANAsquare.
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. 313, doi. 10.1186/1471-2105-8-313
- Publication type:
- Article
47
Modular co-evolution of metabolic networks.
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. 311, doi. 10.1186/1471-2105-8-311
- Publication type:
- Article
48
Convergent algorithms for protein structural alignment.
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. 306, doi. 10.1186/1471-2105-8-306
- Publication type:
- Article
49
Automated smoother for the numerical decoupling of dynamicsmodels.
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. 305, doi. 10.1186/1471-2105-8-305
- Publication type:
- Article
50
Evaluation of 3D-Jury on CASP7 models.
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. 304, doi. 10.1186/1471-2105-8-304
- Publication type:
- Article