Ontological visualization of protein-protein interactions.
- Published in:
- BMC Bioinformatics, 2005, v. 6, n. 1, p. 1, doi. 10.1186/1471-2105-6-29
- By:
- Publication type:
- Article
Works matching IS 14712105 AND DT 2005 AND VI 6
Results: 416
1
2
ESTree db: a Tool for Peach Functional Genomics.
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- BMC Bioinformatics, 2005, v. 6, p. S16, doi. 10.1186/1471-2105-6-S4-S16
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- Article
3
Construction and validation of the APOCHIP, a spottedoligo-microarray for the study of beta-cell apoptosis.
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- BMC Bioinformatics, 2005, v. 6, p. 311
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- Article
4
Classification of real and pseudo microRNA precursors using localstructure-sequence features and support vector machine.
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- BMC Bioinformatics, 2005, v. 6, p. 310
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- Article
5
Comparison of normalization methods for CodeLink Bioarray data.
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- BMC Bioinformatics, 2005, v. 6, p. 309
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- Article
6
Probabilistic annotation of protein sequences based on functionalclassifications.
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- BMC Bioinformatics, 2005, v. 6, p. 302
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- Article
7
A decoy set for the thermostable subdomain from chicken villinheadpiece, comparison of different free energy estimators.
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- BMC Bioinformatics, 2005, v. 6, p. 301
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- Article
8
Gene capture prediction and overlap estimation in EST sequencingfrom one or multiple libraries.
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- BMC Bioinformatics, 2005, v. 6, p. 300
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- Article
9
A microarray data-based semi-kinetic method for predictingquantitative dynamics of genetic networks.
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- BMC Bioinformatics, 2005, v. 6, p. 299
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- Article
10
InterferenceAnalyzer: Tools for the analysis and simulation ofmulti-locus genetic data.
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- BMC Bioinformatics, 2005, v. 6, p. 297
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- Article
11
PSE: A tool for browsing a large amount of MEDLINE/PubMedabstracts with gene names and common words as the keywords.
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- BMC Bioinformatics, 2005, v. 6, p. 295
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- Article
12
Harshlight: a "corrective make-up" program for microarray chips.
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- BMC Bioinformatics, 2005, v. 6, p. 294
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13
An algorithm for automatic evaluation of the spot quality intwo-color DNA microarray experiments.
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- BMC Bioinformatics, 2005, v. 6, p. 293
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14
An SVM-based system for predicting protein subnuclearlocalizations.
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- BMC Bioinformatics, 2005, v. 6, p. 291
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15
GenClust: A genetic algorithm for clustering gene expression data.
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- BMC Bioinformatics, 2005, v. 6, p. 289
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16
Genetic interaction motif finding by expectation maximization -- anovel statistical model for inferring gene modules from syntheticlethality.
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- BMC Bioinformatics, 2005, v. 6, p. 288
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17
Identification of significant periodic genes in microarray geneexpression data.
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- BMC Bioinformatics, 2005, v. 6, p. 286
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18
Transformation and other factors of the peptide massspectrometry pairwise peak-list comparison process.
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- BMC Bioinformatics, 2005, v. 6, p. 285
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19
The distance-profile representation and its application to detectionof distantly related protein families.
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- BMC Bioinformatics, 2005, v. 6, p. 282
- Publication type:
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20
An algorithm for the determination and quantification ofcomponents of nucleic acid mixtures based on single sequencingreactions.
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- BMC Bioinformatics, 2005, v. 6, p. 281
- Publication type:
- Article
21
Principal component analysis for predicting transcription-factorbinding motifs from array-derived data.
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- BMC Bioinformatics, 2005, v. 6, p. 276
- Publication type:
- Article
22
Genome-wide identification of the regulatory targets of atranscription factor using biochemical characterization andcomputational genomic analysis.
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- BMC Bioinformatics, 2005, v. 6, p. 275
- Publication type:
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23
A stepwise framework for the normalization of array CGH data.
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- BMC Bioinformatics, 2005, v. 6, p. 274
- Publication type:
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24
Ancestral sequence alignment under optimal conditions.
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- BMC Bioinformatics, 2005, v. 6, p. 273
- Publication type:
- Article
25
The yeast kinome displays scale free topology with functional hubclusters.
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- BMC Bioinformatics, 2005, v. 6, p. 271
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26
Commensurate distances and similar motifs in genetic congruenceand protein interaction networks in yeast.
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- BMC Bioinformatics, 2005, v. 6, p. 270
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27
Identification of clustered microRNAs using an ab initio predictionmethod.
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- BMC Bioinformatics, 2005, v. 6, p. 267
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28
Selecting additional tag SNPs for tolerating missing data ingenotyping.
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- BMC Bioinformatics, 2005, v. 6, p. 263
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29
Using hexamers to predict cis-regulatory motifs in Drosophila.
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- BMC Bioinformatics, 2005, v. 6, p. 262
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30
A method of precise mRNA/DNA homology-based gene structureprediction.
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- BMC Bioinformatics, 2005, v. 6, p. 261
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31
SpectralNET -- an application for spectral graph analysis andvisualization.
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- BMC Bioinformatics, 2005, v. 6, p. 260
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32
Human promoter genomic composition demonstrates non-randomgroupings that reflect general cellular function.
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- BMC Bioinformatics, 2005, v. 6, p. 259
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33
Dynamic modeling of cis-regulatory circuits and gene expressionprediction via cross-gene identification.
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- BMC Bioinformatics, 2005, v. 6, p. 258
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34
Statistical distributions of optimal global alignment scores ofrandom protein sequences.
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- BMC Bioinformatics, 2005, v. 6, p. 257
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- Article
35
The modeled structure of the RNA dependent RNA polymerase ofGBV-C Virus suggests a role for motif E in Flaviviridae RNApolymerases.
- Published in:
- BMC Bioinformatics, 2005, v. 6, p. 255
- Publication type:
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36
Prediction of Β-barrel membrane proteins by searching forrestricted domains.
- Published in:
- BMC Bioinformatics, 2005, v. 6, p. 254
- Publication type:
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37
ProfNet, a method to derive profile-profile alignment scoringfunctions that improves the alignments of distantly related proteins.
- Published in:
- BMC Bioinformatics, 2005, v. 6, p. 253
- Publication type:
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38
Differentiation of regions with atypical oligonucleotide compositionin bacterial genomes.
- Published in:
- BMC Bioinformatics, 2005, v. 6, p. 251
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39
MASQOT: a method for cDNA microarray spot quality control.
- Published in:
- BMC Bioinformatics, 2005, v. 6, p. 250
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40
Better prediction of protein contact number using a support vectorregression analysis of amino acid sequence.
- Published in:
- BMC Bioinformatics, 2005, v. 6, p. 248
- Publication type:
- Article
41
ASPIC: a novel method to predict the exon-intron structure of agene that is optimally compatible to a set of transcript sequences.
- Published in:
- BMC Bioinformatics, 2005, v. 6, p. 244
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42
Phylogenetic detection of conserved gene clusters in microbialgenomes.
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- BMC Bioinformatics, 2005, v. 6, p. 243
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43
Clustering protein sequences with a novel metric transformed fromsequence similarity scores and sequence alignments with neuralnetworks.
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- BMC Bioinformatics, 2005, v. 6, p. 242
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44
A comparison of RNA folding measures.
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- BMC Bioinformatics, 2005, v. 6, p. 241
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45
Sequence variation in ligand binding sites in proteins.
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- BMC Bioinformatics, 2005, v. 6, p. 240
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46
Mathematical design of prokaryotic clone-based microarrays.
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- BMC Bioinformatics, 2005, v. 6, p. 238
- Publication type:
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47
Measuring similarities between transcription factor binding sites.
- Published in:
- BMC Bioinformatics, 2005, v. 6, p. 237
- Publication type:
- Article
48
SIMPROT: Using an empirically determined indel distribution insimulations of protein evolution.
- Published in:
- BMC Bioinformatics, 2005, v. 6, p. 236
- Publication type:
- Article
49
A linear memory algorithm for Baum-Welch training.
- Published in:
- BMC Bioinformatics, 2005, v. 6, p. 231
- Publication type:
- Article
50
SUPERFICIAL -- Surface mapping of proteins via structure-basedpeptide library design.
- Published in:
- BMC Bioinformatics, 2005, v. 6, p. 223
- Publication type:
- Article