Works matching IS 14712105 AND DT 2002 AND VI 3
Results: 40
ORFer -- retrieval of protein sequences and open reading frames from GenBank and storage into relational databases or text files.
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- BMC Bioinformatics, 2002, v. 3, p. 40
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Species-specific protein sequence and fold optimizations.
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- BMC Bioinformatics, 2002, v. 3, p. 39, doi. 10.1186/1471-2105-3-39
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Quantifying robustness of biochemical network models.
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- BMC Bioinformatics, 2002, v. 3, p. 38, doi. 10.1186/1471-2105-3-38
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Total sequence decomposition distinguishes functional modules, "molegos" in apurinic/apyrimidinic endonucleases.
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- BMC Bioinformatics, 2002, v. 3, p. 37, doi. 10.1186/1471-2105-3-37
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Clustering of the SOM easily reveals distinct gene expression patterns: results of a reanalysis of lymphoma study.
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- BMC Bioinformatics, 2002, v. 3, p. 36, doi. 10.1186/1471-2105-3-36
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FunSpec: a web-based cluster interpreter for yeast.
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- BMC Bioinformatics, 2002, v. 3, p. 35, doi. 10.1186/1471-2105-3-35
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Development and production of an oligonucleotide MuscleChip: use for validation of ambiguous ESTs.
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- BMC Bioinformatics, 2002, v. 3, p. 33, doi. 10.1186/1471-2105-3-33
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Oliz, a suite of Perl scripts that assist in the design of microarrays using 50mer oligonucleotides from the 3' untranslated region.
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- BMC Bioinformatics, 2002, v. 3, p. 27, doi. 10.1186/1471-2105-3-27
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Expression profiling of human renal carcinomas with functional taxonomic analysis.
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- BMC Bioinformatics, 2002, v. 3, p. 26, doi. 10.1186/1471-2105-3-26
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Automated modelling of signal transduction networks.
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- BMC Bioinformatics, 2002, v. 3, p. 34, doi. 10.1186/1471-2105-3-34
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Computational detection of genomic cis-regulatory modules applied to body patterning in the early Drosophila embryo.
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- BMC Bioinformatics, 2002, v. 3, p. 1
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Simulation of DNA array hybridization experiments and evaluation of critical parameters during subsequent image and data analysis.
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- BMC Bioinformatics, 2002, v. 3, p. 29, doi. 10.1186/1471-2105-3-29
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SeqHound: biological sequence and structure database as a platform for bioinformatics research.
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- BMC Bioinformatics, 2002, v. 3, p. 32, doi. 10.1186/1471-2105-3-32
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Efficient Boolean implementation of universal sequence maps (bUSM).
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- BMC Bioinformatics, 2002, v. 3, p. 28, doi. 10.1186/1471-2105-3-28
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Making sense of EST sequences by CLOBBing them.
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- BMC Bioinformatics, 2002, v. 3, p. 31, doi. 10.1186/1471-2105-3-31
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Prediction of MHC class I binding peptides, using SVMHC.
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- BMC Bioinformatics, 2002, v. 3, p. 25
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The functional importance of disease-associated mutation.
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- BMC Bioinformatics, 2002, v. 3, p. 24, doi. 10.1186/1471-2105-3-24
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Computational method for reducing variance with Affymetrix microarrays.
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- BMC Bioinformatics, 2002, v. 3, p. 23, doi. 10.1186/1471-2105-3-23
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Microarray results: how accurate are they?
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- BMC Bioinformatics, 2002, v. 3, p. 1
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The SGS3 protein involved in PTGS finds a family.
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- BMC Bioinformatics, 2002, v. 3, p. 21, doi. 10.1186/1471-2105-3-21
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Kangaroo -- A pattern-matching program for biological sequences.
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- BMC Bioinformatics, 2002, v. 3, p. 20, doi. 10.1186/1471-2105-3-20
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Visualizing the genome: techniques for presenting human genome data and annotations.
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- BMC Bioinformatics, 2002, v. 3, p. 19, doi. 10.1186/1471-2105-3-19
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The limit fold change model: A practical approach for selecting differentially expressed genes from microarray data.
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- BMC Bioinformatics, 2002, v. 3, p. 17, doi. 10.1186/1471-2105-3-17
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A memory-efficient dynamic programming algorithm for optimal alignment of a sequence to an RNA secondary structure.
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- BMC Bioinformatics, 2002, v. 3, p. 18, doi. 10.1186/1471-2105-3-18
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Identifying functional relationships among human genes by systematic analysis of biological literature.
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- BMC Bioinformatics, 2002, v. 3, p. 16, doi. 10.1186/1471-2105-3-16
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CoreGenes: A computational tool for identifying and cataloging "core" genes in a set of small genomes.
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- BMC Bioinformatics, 2002, v. 3, p. 12, doi. 10.1186/1471-2105-3-12
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Correlating overrepresented upstream motifs to gene expression: a computational approach to regulatory element discovery in eukaryotes.
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- BMC Bioinformatics, 2002, v. 3, p. 7, doi. 10.1186/1471-2105-3-7
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Universal sequence map (USM) of arbitrary discrete sequences.
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- BMC Bioinformatics, 2002, v. 3, p. 6, doi. 10.1186/1471-2105-3-6
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Re-annotation of genome microbial CoDing-Sequences: finding new genes and inaccurately annotated genes.
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- BMC Bioinformatics, 2002, v. 3, p. 5
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The Comparative RNA Web (CRW) Site: an online database of comparative sequence and structure information for ribosomal, intron, and other RNAs: Correction.
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- 2002
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- Correction Notice
NBLAST: a cluster variant of BLAST for NxN comparisons.
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- BMC Bioinformatics, 2002, v. 3, p. 13, doi. 10.1186/1471-2105-3-13
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RIO: Analyzing proteomes by automated phylogenomics using resampled inference of orthologs.
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- BMC Bioinformatics, 2002, v. 3, p. 14, doi. 10.1186/1471-2105-3-14
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Sources of variability and effect of experimental approach on expression profiling data interpretation.
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- BMC Bioinformatics, 2002, v. 3, p. 4, doi. 10.1186/1471-2105-3-4
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Match-Only Integral Distribution (MOID) Algorithm for high-density oligonucleotide array analysis.
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- BMC Bioinformatics, 2002, v. 3, p. 3, doi. 10.1186/1471-2105-3-3
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Homology Induction: the use of machine learning to improve sequence similarity searches.
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- BMC Bioinformatics, 2002, v. 3, p. 11, doi. 10.1186/1471-2105-3-11
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RNA:(guanine-N2) methyltransferases RsmC/RsmD and their homologs revisited -- bioinformatic analysis and prediction of the active site based on the uncharacterized Mj0882 protein structure.
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- BMC Bioinformatics, 2002, v. 3, p. 10, doi. 10.1186/1471-2105-3-10
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An algorithm and program for finding sequence specific oligo-nucleotide probes for species identification.
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- BMC Bioinformatics, 2002, v. 3, p. 9, doi. 10.1186/1471-2105-3-9
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tacg -- a grep for DNA.
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- BMC Bioinformatics, 2002, v. 3, p. 1
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- Article
The Comparative RNA Web (CRW) Site: an online database of comparative sequence and structure information for ribosomal, intron, and other RNAs.
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- BMC Bioinformatics, 2002, v. 3, p. 2, doi. 10.1186/1471-2105-3-2
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- Publication type:
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Identification and characterization of subfamily-specific signatures in a large protein superfamily by a hidden Markov model approach.
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- BMC Bioinformatics, 2002, v. 3, p. 1, doi. 10.1186/1471-2105-3-1
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- Article