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Investigating the role of super-enhancer RNAs underlying embryonic stem cell differentiation.
- Published in:
- BMC Genomics, 2019, v. 20, p. 1, doi. 10.1186/s12864-019-6293-x
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- Publication type:
- Article
Deep analysis and optimization of CARD antibiotic resistance gene discovery models.
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- BMC Genomics, 2019, v. 20, p. 1, doi. 10.1186/s12864-019-6318-5
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- Article
De novo sequencing of the transcriptome reveals regulators of the floral transition in Fargesia macclureana (Poaceae).
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- BMC Genomics, 2019, v. 20, p. 1, doi. 10.1186/s12864-019-6418-2
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- Article
Comparative genomics of Alternaria species provides insights into the pathogenic lifestyle of Alternaria brassicae – a pathogen of the Brassicaceae family.
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- BMC Genomics, 2019, v. 20, p. 1, doi. 10.1186/s12864-019-6414-6
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- Article
The transcriptomic signature of low aggression in honey bees resembles a response to infection.
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- BMC Genomics, 2019, v. 20, p. 1, doi. 10.1186/s12864-019-6417-3
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- Article
Proximal femoral head transcriptome reveals novel candidate genes related to epiphysiolysis in broiler chickens.
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- BMC Genomics, 2019, v. 20, p. 1, doi. 10.1186/s12864-019-6411-9
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- Publication type:
- Article
Genome sequencing of Mycobacterium pinnipedii strains: genetic characterization and evidence of superinfection in a South American sea lion (Otaria flavescens).
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- BMC Genomics, 2019, v. 20, p. 1, doi. 10.1186/s12864-019-6407-5
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- Article
High-level integration of murine intestinal transcriptomics data highlights the importance of the complement system in mucosal homeostasis.
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- BMC Genomics, 2019, v. 20, p. 1, doi. 10.1186/s12864-019-6390-x
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- Publication type:
- Article
Chicken adaptive response to low energy diet: main role of the hypothalamic lipid metabolism revealed by a phenotypic and multi-tissue transcriptomic approach.
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- BMC Genomics, 2019, v. 20, p. 1, doi. 10.1186/s12864-019-6384-8
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- Article
Genomic identification and characterization of MYC family genes in wheat (Triticum aestivum L.).
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- BMC Genomics, 2019, v. 20, p. 1, doi. 10.1186/s12864-019-6373-y
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- Publication type:
- Article
Hydrogen cyanamide induces grape bud endodormancy release through carbohydrate metabolism and plant hormone signaling.
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- BMC Genomics, 2019, v. 20, p. 1, doi. 10.1186/s12864-019-6368-8
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- Publication type:
- Article
iPseU-NCP: Identifying RNA pseudouridine sites using random forest and NCP-encoded features.
- Published in:
- BMC Genomics, 2019, v. 20, p. 1, doi. 10.1186/s12864-019-6357-y
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- Publication type:
- Article
Exploring the changing landscape of cell-to-cell variation after CTCF knockdown via single cell RNA-seq.
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- BMC Genomics, 2019, v. 20, n. 1, p. 1, doi. 10.1186/s12864-019-6379-5
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- Article
An ancestry informative marker panel design for individual ancestry estimation of Hispanic population using whole exome sequencing data.
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- BMC Genomics, 2019, v. 20, p. 1, doi. 10.1186/s12864-019-6333-6
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- Article
SMaSH: Sample matching using SNPs in humans.
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- BMC Genomics, 2019, v. 20, p. 1, doi. 10.1186/s12864-019-6332-7
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- Publication type:
- Article
normGAM: an R package to remove systematic biases in genome architecture mapping data.
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- BMC Genomics, 2019, v. 20, p. 1, doi. 10.1186/s12864-019-6331-8
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- Publication type:
- Article
Human protein-RNA interaction network is highly stable across mammals.
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- BMC Genomics, 2019, v. 20, p. 1, doi. 10.1186/s12864-019-6330-9
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- Publication type:
- Article
Cloud accelerated alignment and assembly of full-length single-cell RNA-seq data using Falco.
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- BMC Genomics, 2019, v. 20, p. 1, doi. 10.1186/s12864-019-6341-6
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- Publication type:
- Article
The International Conference on Intelligent Biology and Medicine 2019 (ICIBM 2019): conference summary and innovations in genomics.
- Published in:
- 2019
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- Publication type:
- Editorial
An efficient simulated annealing algorithm for the RNA secondary structure prediction with Pseudoknots.
- Published in:
- BMC Genomics, 2019, v. 20, n. 1, p. 1, doi. 10.1186/s12864-019-6300-2
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- Publication type:
- Article
D3GRN: a data driven dynamic network construction method to infer gene regulatory networks.
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- BMC Genomics, 2019, v. 20, n. 1, p. 1, doi. 10.1186/s12864-019-6298-5
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- Publication type:
- Article
A generative model for constructing nucleic acid sequences binding to a protein.
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- BMC Genomics, 2019, v. 20, n. 1, p. 1, doi. 10.1186/s12864-019-6299-4
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- Publication type:
- Article
ManiNetCluster: a novel manifold learning approach to reveal the functional links between gene networks.
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- BMC Genomics, 2019, v. 20, p. 1, doi. 10.1186/s12864-019-6329-2
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- Publication type:
- Article
Clonal reconstruction from time course genomic sequencing data.
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- BMC Genomics, 2019, v. 20, p. 1, doi. 10.1186/s12864-019-6328-3
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- Publication type:
- Article
Sketch distance-based clustering of chromosomes for large genome database compression.
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- BMC Genomics, 2019, v. 20, p. 1, doi. 10.1186/s12864-019-6310-0
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- Publication type:
- Article
Capture of complete ciliate chromosomes in single sequencing reads reveals widespread chromosome isoforms.
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- BMC Genomics, 2019, v. 20, p. 1, doi. 10.1186/s12864-019-6189-9
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- Publication type:
- Article
Genetic dissection of canine hip dysplasia phenotypes and osteoarthritis reveals three novel loci.
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- BMC Genomics, 2019, v. 20, n. 1, p. 1, doi. 10.1186/s12864-019-6422-6
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- Publication type:
- Article
Genomic selection for non-key traits in radiata pine when the documented pedigree is corrected using DNA marker information.
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- BMC Genomics, 2019, v. 20, n. 1, p. 1, doi. 10.1186/s12864-019-6420-8
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- Publication type:
- Article
iEnhancer-ECNN: identifying enhancers and their strength using ensembles of convolutional neural networks.
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- BMC Genomics, 2019, v. 20, n. 9, p. 1, doi. 10.1186/s12864-019-6336-3
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- Publication type:
- Article
Full-length transcriptome sequences of Agropyron cristatum facilitate the prediction of putative genes for thousand-grain weight in a wheat-A. cristatum translocation line.
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- BMC Genomics, 2019, v. 20, n. 1, p. 1, doi. 10.1186/s12864-019-6416-4
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- Publication type:
- Article
Putative biomarkers for predicting tumor sample purity based on gene expression data.
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- BMC Genomics, 2019, v. 20, n. 1, p. 1, doi. 10.1186/s12864-019-6412-8
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- Publication type:
- Article
Effect of growth rate on transcriptomic responses to immune stimulation in wild-type, domesticated, and GH-transgenic coho salmon.
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- BMC Genomics, 2019, v. 20, n. 1, p. 1, doi. 10.1186/s12864-019-6408-4
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- Publication type:
- Article
Investigating host-bacterial interactions among enteric pathogens.
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- BMC Genomics, 2019, v. 20, n. 1, p. 1, doi. 10.1186/s12864-019-6398-2
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- Publication type:
- Article
A ligation-based single-stranded library preparation method to analyze cell-free DNA and synthetic oligos.
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- BMC Genomics, 2019, v. 20, n. 1, p. 1, doi. 10.1186/s12864-019-6355-0
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- Publication type:
- Article
A computational method to predict topologically associating domain boundaries combining histone Marks and sequence information.
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- BMC Genomics, 2019, v. 20, n. 1, p. 1, doi. 10.1186/s12864-019-6303-z
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- Publication type:
- Article
A novel algorithm for alignment of multiple PPI networks based on simulated annealing.
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- BMC Genomics, 2019, v. 20, n. 1, p. 1, doi. 10.1186/s12864-019-6302-0
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- Publication type:
- Article
Identification of self-interacting proteins by integrating random projection classifier and finite impulse response filter.
- Published in:
- BMC Genomics, 2019, v. 20, n. 1, p. 1, doi. 10.1186/s12864-019-6301-1
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- Publication type:
- Article
Archaic mitochondrial DNA inserts in modern day nuclear genomes.
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- BMC Genomics, 2019, v. 20, n. 1, p. 1, doi. 10.1186/s12864-019-6392-8
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- Publication type:
- Article
Transcriptome analysis of the fungal pathogen Rosellinia necatrix during infection of a susceptible avocado rootstock identifies potential mechanisms of pathogenesis.
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- BMC Genomics, 2019, v. 20, n. 1, p. 1, doi. 10.1186/s12864-019-6387-5
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- Publication type:
- Article
Network analysis exposes core functions in major lifestyles of fungal and oomycete plant pathogens.
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- BMC Genomics, 2019, v. 20, n. 1, p. 1, doi. 10.1186/s12864-019-6409-3
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- Publication type:
- Article
Different transcriptional response between susceptible and resistant common carp (Cyprinus carpio) fish hints on the mechanism of CyHV-3 disease resistance.
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- BMC Genomics, 2019, v. 20, n. 1, p. 1, doi. 10.1186/s12864-019-6391-9
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- Publication type:
- Article
PaCBAM: fast and scalable processing of whole exome and targeted sequencing data.
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- BMC Genomics, 2019, v. 20, n. 1, p. 1, doi. 10.1186/s12864-019-6386-6
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- Publication type:
- Article
Refining modules to determine functionally significant clusters in molecular networks.
- Published in:
- BMC Genomics, 2019, v. 20, n. 9, p. 1, doi. 10.1186/s12864-019-6294-9
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- Publication type:
- Article
MS2CNN: predicting MS/MS spectrum based on protein sequence using deep convolutional neural networks.
- Published in:
- BMC Genomics, 2019, v. 20, n. 9, p. 1, doi. 10.1186/s12864-019-6297-6
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- Publication type:
- Article
Genome-wide identification, phylogeny, and expression analysis of the SBP-box gene family in Euphorbiaceae.
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- BMC Genomics, 2019, v. 20, n. 9, p. 1, doi. 10.1186/s12864-019-6319-4
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- Publication type:
- Article
JCDB: a comprehensive knowledge base for Jatropha curcas, an emerging model for woody energy plants.
- Published in:
- BMC Genomics, 2019, v. 20, n. 9, p. 1, doi. 10.1186/s12864-019-6356-z
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- Publication type:
- Article
JCDB: a comprehensive knowledge base for Jatropha curcas, an emerging model for woody energy plants.
- Published in:
- BMC Genomics, 2019, v. 20, n. 9, p. 1, doi. 10.1186/s12864-019-6356-z
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- Publication type:
- Article
scReClassify: post hoc cell type classification of single-cell rNA-seq data.
- Published in:
- BMC Genomics, 2019, v. 20, n. 9, p. 1, doi. 10.1186/s12864-019-6305-x
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- Publication type:
- Article
Rule-based meta-analysis reveals the major role of PB2 in influencing influenza A virus virulence in mice.
- Published in:
- BMC Genomics, 2019, v. 20, n. 9, p. 1, doi. 10.1186/s12864-019-6295-8
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- Publication type:
- Article
Classification of adaptor proteins using recurrent neural networks and PSSM profiles.
- Published in:
- BMC Genomics, 2019, v. 20, n. 9, p. 1, doi. 10.1186/s12864-019-6335-4
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- Publication type:
- Article