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miRBaseConverter: an R/Bioconductor package for converting and retrieving miRNA name, accession, sequence and family information in different versions of miRBase.
- Published in:
- BMC Bioinformatics, 2018, v. 19, n. 19, p. 179, doi. 10.1186/s12859-018-2531-5
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- Article
A latent allocation model for the analysis of microbial composition and disease.
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- BMC Bioinformatics, 2018, v. 19, n. 19, p. 171, doi. 10.1186/s12859-018-2530-6
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- Article
Computational prediction of plasma protein binding of cyclic peptides from small molecule experimental data using sparse modeling techniques.
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- BMC Bioinformatics, 2018, v. 19, n. 19, p. 157, doi. 10.1186/s12859-018-2529-z
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- Article
Classifying early and late mild cognitive impairment stages of Alzheimer's disease by fusing default mode networks extracted with multiple seeds.
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- BMC Bioinformatics, 2018, v. 19, n. 19, p. 147, doi. 10.1186/s12859-018-2528-0
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- Article
PDRLGB: precise DNA-binding residue prediction using a light gradient boosting machine.
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- BMC Bioinformatics, 2018, v. 19, n. 19, p. 135, doi. 10.1186/s12859-018-2527-1
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- Article
Constructing a database for the relations between CNV and human genetic diseases via systematic text mining.
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- BMC Bioinformatics, 2018, v. 19, n. 19, p. 125, doi. 10.1186/s12859-018-2526-2
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- Article
Predicting protein-protein interactions using high-quality non-interacting pairs.
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- BMC Bioinformatics, 2018, v. 19, n. 19, p. 105, doi. 10.1186/s12859-018-2525-3
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- Article
A benchmark study of sequence alignment methods for protein clustering.
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- BMC Bioinformatics, 2018, v. 19, n. 19, p. 95, doi. 10.1186/s12859-018-2524-4
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- Article
Convolutional neural network based on SMILES representation of compounds for detecting chemical motif.
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- BMC Bioinformatics, 2018, v. 19, n. 19, p. 83, doi. 10.1186/s12859-018-2523-5
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- Publication type:
- Article
DWNN-RLS: regularized least squares method for predicting circRNA-disease associations.
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- BMC Bioinformatics, 2018, v. 19, n. 19, p. 73, doi. 10.1186/s12859-018-2522-6
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- Publication type:
- Article
Estimating heterogeneous treatment effect by balancing heterogeneity and fitness.
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- BMC Bioinformatics, 2018, v. 19, n. 19, p. 61, doi. 10.1186/s12859-018-2521-7
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- Publication type:
- Article
Predicting adverse drug reactions of combined medication from heterogeneous pharmacologic databases.
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- BMC Bioinformatics, 2018, v. 19, n. 19, p. 49, doi. 10.1186/s12859-018-2520-8
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- Publication type:
- Article
hoDCA: higher order direct-coupling analysis.
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- BMC Bioinformatics, 2018, v. 19, n. 1, p. 1, doi. 10.1186/s12859-018-2583-6
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- Publication type:
- Article
Identification of pre-microRNAs by characterizing their sequence order evolution information and secondary structure graphs.
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- BMC Bioinformatics, 2018, v. 19, n. 19, p. 25, doi. 10.1186/s12859-018-2518-2
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- Article
In silico design of MHC class I high binding affinity peptides through motifs activation map.
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- BMC Bioinformatics, 2018, v. 19, n. 19, p. 13, doi. 10.1186/s12859-018-2517-3
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- Publication type:
- Article
Large-scale mining disease comorbidity relationships from post-market drug adverse events surveillance data.
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- BMC Bioinformatics, 2018, v. 19, n. 17, p. 85, doi. 10.1186/s12859-018-2468-8
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- Publication type:
- Article
Single-cell gene expression analysis reveals β-cell dysfunction and deficit mechanisms in type 2 diabetes.
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- BMC Bioinformatics, 2018, v. 19, n. 19, p. 37, doi. 10.1186/s12859-018-2519-1
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- Publication type:
- Article
Time-lagged Ordered Lasso for network inference.
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- BMC Bioinformatics, 2018, v. 19, n. 1, p. 1, doi. 10.1186/s12859-018-2558-7
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- Publication type:
- Article
Application of transfer learning for cancer drug sensitivity prediction.
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- BMC Bioinformatics, 2018, v. 19, n. 17, p. 51, doi. 10.1186/s12859-018-2465-y
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- Publication type:
- Article
iMEGES: integrated mental-disorder GEnome score by deep neural network for prioritizing the susceptibility genes for mental disorders in personal genomes.
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- BMC Bioinformatics, 2018, v. 19, n. 17, p. 95, doi. 10.1186/s12859-018-2469-7
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- Publication type:
- Article
DeepM6ASeq: prediction and characterization of m6A-containing sequences using deep learning.
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- BMC Bioinformatics, 2018, v. 19, n. 19, p. 1, doi. 10.1186/s12859-018-2516-4
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- Publication type:
- Article
A multitask bi-directional RNN model for named entity recognition on Chinese electronic medical records.
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- BMC Bioinformatics, 2018, v. 19, n. 17, p. 75, doi. 10.1186/s12859-018-2467-9
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- Publication type:
- Article
Using natural language processing and machine learning to identify breast cancer local recurrence.
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- BMC Bioinformatics, 2018, v. 19, n. 17, p. 65, doi. 10.1186/s12859-018-2466-x
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- Publication type:
- Article
Predicting adverse drug reactions through interpretable deep learning framework.
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- BMC Bioinformatics, 2018, v. 19, n. 17, p. 1, doi. 10.1186/s12859-018-2544-0
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- Publication type:
- Article
Reconstructing high-resolution chromosome three-dimensional structures by Hi-C complex networks.
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- BMC Bioinformatics, 2018, v. 19, n. 17, p. 39, doi. 10.1186/s12859-018-2464-z
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- Publication type:
- Article
DLAD4U: deriving and prioritizing disease lists from PubMed literature.
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- BMC Bioinformatics, 2018, v. 19, n. 17, p. 29, doi. 10.1186/s12859-018-2463-0
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- Publication type:
- Article
Evaluation of top-down mass spectral identification with homologous protein sequences.
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- BMC Bioinformatics, 2018, v. 19, n. 17, p. 21, doi. 10.1186/s12859-018-2462-1
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- Publication type:
- Article
A new insight into underlying disease mechanism through semi-parametric latent differential network model.
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- BMC Bioinformatics, 2018, v. 19, n. 17, p. 5, doi. 10.1186/s12859-018-2461-2
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- Article
The International Conference on Intelligent Biology and Medicine (ICIBM) 2018: bioinformatics towards translational applications.
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- 2018
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- Publication type:
- Proceeding
Web-based design and analysis tools for CRISPR base editing.
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- BMC Bioinformatics, 2018, v. 19, n. 1, p. 1, doi. 10.1186/s12859-018-2585-4
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- Publication type:
- Article
FELLA: an R package to enrich metabolomics data.
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- BMC Bioinformatics, 2018, v. 19, n. 1, p. 1, doi. 10.1186/s12859-018-2487-5
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- Publication type:
- Article
Degeneracy and genetic assimilation in RNA evolution.
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- BMC Bioinformatics, 2018, v. 19, n. 1, p. 1, doi. 10.1186/s12859-018-2497-3
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- Publication type:
- Article
MeDEStrand: an improved method to infer genome-wide absolute methylation levels from DNA enrichment data.
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- BMC Bioinformatics, 2018, v. 19, n. 1, p. 1, doi. 10.1186/s12859-018-2574-7
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- Publication type:
- Article
Capturing context-specific regulation in molecular interaction networks.
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- BMC Bioinformatics, 2018, v. 19, n. 1, p. 1, doi. 10.1186/s12859-018-2513-7
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- Publication type:
- Article
Fast and scalable neural embedding models for biomedical sentence classification.
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- BMC Bioinformatics, 2018, v. 19, n. 1, p. 1, doi. 10.1186/s12859-018-2496-4
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- Publication type:
- Article
SMARTcleaner: identify and clean off-target signals in SMART ChIP-seq analysis.
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- BMC Bioinformatics, 2018, v. 19, n. 1, p. 1, doi. 10.1186/s12859-018-2577-4
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- Publication type:
- Article
MicroRNA dysregulational synergistic network: discovering microRNA dysregulatory modules across subtypes in non-small cell lung cancers.
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- BMC Bioinformatics, 2018, v. 19, n. 18, p. 25, doi. 10.1186/s12859-018-2536-0
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- Publication type:
- Article
Rapid analysis of metagenomic data using signature-based clustering.
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- BMC Bioinformatics, 2018, v. 19, n. 18, p. 79, doi. 10.1186/s12859-018-2540-4
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- Publication type:
- Article
Detection and visualization of complex structural variants from long reads.
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- BMC Bioinformatics, 2018, v. 19, n. 18, p. 67, doi. 10.1186/s12859-018-2539-x
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- Publication type:
- Article
An SVM-based method for assessment of transcription factor-DNA complex models.
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- BMC Bioinformatics, 2018, v. 19, n. 18, p. 49, doi. 10.1186/s12859-018-2538-y
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- Publication type:
- Article
Nonlinear expression and visualization of nonmetric relationships in genetic diseases and microbiome data.
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- BMC Bioinformatics, 2018, v. 19, n. 18, p. 37, doi. 10.1186/s12859-018-2537-z
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- Publication type:
- Article
Bidirectional long short-term memory with CRF for detecting biomedical event trigger in FastText semantic space.
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- BMC Bioinformatics, 2018, v. 19, n. 18, p. 59, doi. 10.1186/s12859-018-2543-1
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- Publication type:
- Article
Sequence-based bacterial small RNAs prediction using ensemble learning strategies.
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- BMC Bioinformatics, 2018, v. 19, n. 18, p. 13, doi. 10.1186/s12859-018-2535-1
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- Publication type:
- Article
Biomedical semantic indexing by deep neural network with multi-task learning.
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- BMC Bioinformatics, 2018, v. 19, n. 18, p. 1, doi. 10.1186/s12859-018-2534-2
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- Publication type:
- Article
High-throughput binding affinity calculations at extreme scales.
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- BMC Bioinformatics, 2018, v. 19, n. 18, p. 33, doi. 10.1186/s12859-018-2506-6
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- Publication type:
- Article
High-throughput cancer hypothesis testing with an integrated PhysiCell-EMEWS workflow.
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- BMC Bioinformatics, 2018, v. 19, n. 18, p. 81, doi. 10.1186/s12859-018-2510-x
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- Publication type:
- Article
Predicting tumor cell line response to drug pairs with deep learning.
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- BMC Bioinformatics, 2018, v. 19, n. 18, p. 71, doi. 10.1186/s12859-018-2509-3
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- Publication type:
- Article
CAT: computer aided triage improving upon the Bayes risk through ε-refusal triage rules.
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- BMC Bioinformatics, 2018, v. 19, n. 18, p. 3, doi. 10.1186/s12859-018-2503-9
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- Publication type:
- Article
Deep clustering of protein folding simulations.
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- BMC Bioinformatics, 2018, v. 19, n. 18, p. 47, doi. 10.1186/s12859-018-2507-5
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- Publication type:
- Article
Scalable deep text comprehension for Cancer surveillance on high-performance computing.
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- BMC Bioinformatics, 2018, v. 19, n. 18, p. 99, doi. 10.1186/s12859-018-2511-9
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- Publication type:
- Article