Works matching IS 14675463 AND DT 2023 AND VI 24 AND IP 4
Results: 78
Editorial.
- Published in:
- 2023
- By:
- Publication type:
- Editorial
ZetaDesign: an end-to-end deep learning method for protein sequence design and side-chain packing.
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- Briefings in Bioinformatics, 2023, v. 24, n. 4, p. 1, doi. 10.1093/bib/bbad257
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- Publication type:
- Article
iBT-Net: an incremental broad transformer network for cancer drug response prediction.
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- Briefings in Bioinformatics, 2023, v. 24, n. 4, p. 1, doi. 10.1093/bib/bbad256
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- Publication type:
- Article
Predicting potential microbe–disease associations based on multi-source features and deep learning.
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- Briefings in Bioinformatics, 2023, v. 24, n. 4, p. 1, doi. 10.1093/bib/bbad255
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- Publication type:
- Article
Deep transfer learning for clinical decision-making based on high-throughput data: comprehensive survey with benchmark results.
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- Briefings in Bioinformatics, 2023, v. 24, n. 4, p. 1, doi. 10.1093/bib/bbad254
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- Publication type:
- Article
An overview on nucleic-acid G-quadruplex prediction: from rule-based methods to deep neural networks.
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- Briefings in Bioinformatics, 2023, v. 24, n. 4, p. 1, doi. 10.1093/bib/bbad252
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- Publication type:
- Article
iDRPro-SC: identifying DNA-binding proteins and RNA-binding proteins based on subfunction classifiers.
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- Briefings in Bioinformatics, 2023, v. 24, n. 4, p. 1, doi. 10.1093/bib/bbad251
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- Article
An interpretable block-attention network for identifying regulatory feature interactions.
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- Briefings in Bioinformatics, 2023, v. 24, n. 4, p. 1, doi. 10.1093/bib/bbad250
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- Publication type:
- Article
From contigs towards chromosomes: automatic improvement of long read assemblies (ILRA).
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- Briefings in Bioinformatics, 2023, v. 24, n. 4, p. 1, doi. 10.1093/bib/bbad248
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- Publication type:
- Article
GCFMCL: predicting miRNA-drug sensitivity using graph collaborative filtering and multi-view contrastive learning.
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- Briefings in Bioinformatics, 2023, v. 24, n. 4, p. 1, doi. 10.1093/bib/bbad247
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- Publication type:
- Article
DeepAlgPro: an interpretable deep neural network model for predicting allergenic proteins.
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- Briefings in Bioinformatics, 2023, v. 24, n. 4, p. 1, doi. 10.1093/bib/bbad246
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- Publication type:
- Article
iEnhance: a multi-scale spatial projection encoding network for enhancing chromatin interaction data resolution.
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- Briefings in Bioinformatics, 2023, v. 24, n. 4, p. 1, doi. 10.1093/bib/bbad245
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- Publication type:
- Article
An integrated deep learning framework for the interpretation of untargeted metabolomics data.
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- Briefings in Bioinformatics, 2023, v. 24, n. 4, p. 1, doi. 10.1093/bib/bbad244
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- Publication type:
- Article
Large-scale predicting protein functions through heterogeneous feature fusion.
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- Briefings in Bioinformatics, 2023, v. 24, n. 4, p. 1, doi. 10.1093/bib/bbad243
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- Publication type:
- Article
EnGens: a computational framework for generation and analysis of representative protein conformational ensembles.
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- Briefings in Bioinformatics, 2023, v. 24, n. 4, p. 1, doi. 10.1093/bib/bbad242
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- Publication type:
- Article
E-value: a superior alternative to P-value and its adjustments in DNA methylation studies.
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- Briefings in Bioinformatics, 2023, v. 24, n. 4, p. 1, doi. 10.1093/bib/bbad241
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- Publication type:
- Article
iAMPCN: a deep-learning approach for identifying antimicrobial peptides and their functional activities.
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- Briefings in Bioinformatics, 2023, v. 24, n. 4, p. 1, doi. 10.1093/bib/bbad240
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- Publication type:
- Article
Orchestrating information across tissues via a novel multitask GAT framework to improve quantitative gene regulation relation modeling for survival analysis.
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- Briefings in Bioinformatics, 2023, v. 24, n. 4, p. 1, doi. 10.1093/bib/bbad238
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- Publication type:
- Article
Network integration and protein structural binding analysis of neurodegeneration-related interactome.
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- Briefings in Bioinformatics, 2023, v. 24, n. 4, p. 1, doi. 10.1093/bib/bbad237
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- Publication type:
- Article
Comprehensive evaluation of deep and graph learning on drug–drug interactions prediction.
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- Briefings in Bioinformatics, 2023, v. 24, n. 4, p. 1, doi. 10.1093/bib/bbad235
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- Publication type:
- Article
Predicting potential small molecule–miRNA associations utilizing truncated schatten p-norm.
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- Briefings in Bioinformatics, 2023, v. 24, n. 4, p. 1, doi. 10.1093/bib/bbad234
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- Publication type:
- Article
ProJect: a powerful mixed-model missing value imputation method.
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- Briefings in Bioinformatics, 2023, v. 24, n. 4, p. 1, doi. 10.1093/bib/bbad233
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- Publication type:
- Article
Leveraging trans-ethnic genetic risk scores to improve association power for complex traits in underrepresented populations.
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- Briefings in Bioinformatics, 2023, v. 24, n. 4, p. 1, doi. 10.1093/bib/bbad232
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- Publication type:
- Article
DeepSTF: predicting transcription factor binding sites by interpretable deep neural networks combining sequence and shape.
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- Briefings in Bioinformatics, 2023, v. 24, n. 4, p. 1, doi. 10.1093/bib/bbad231
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- Publication type:
- Article
A novel statistical method for decontaminating T-cell receptor sequencing data.
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- Briefings in Bioinformatics, 2023, v. 24, n. 4, p. 1, doi. 10.1093/bib/bbad230
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- Publication type:
- Article
A feature extraction free approach for protein interactome inference from co-elution data.
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- Briefings in Bioinformatics, 2023, v. 24, n. 4, p. 1, doi. 10.1093/bib/bbad229
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- Publication type:
- Article
DKADE: a novel framework based on deep learning and knowledge graph for identifying adverse drug events and related medications.
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- Briefings in Bioinformatics, 2023, v. 24, n. 4, p. 1, doi. 10.1093/bib/bbad228
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- Publication type:
- Article
MPCLCDA: predicting circRNA–disease associations by using automatically selected meta-path and contrastive learning.
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- Briefings in Bioinformatics, 2023, v. 24, n. 4, p. 1, doi. 10.1093/bib/bbad227
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- Publication type:
- Article
PharmBERT: a domain-specific BERT model for drug labels.
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- Briefings in Bioinformatics, 2023, v. 24, n. 4, p. 1, doi. 10.1093/bib/bbad226
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- Publication type:
- Article
C-RCPred: a multi-objective algorithm for interactive secondary structure prediction of RNA complexes integrating user knowledge and SHAPE data.
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- Briefings in Bioinformatics, 2023, v. 24, n. 4, p. 1, doi. 10.1093/bib/bbad225
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- Publication type:
- Article
Correction: Comparison and benchmark of structural variants detected from long read and long-read assembly.
- Published in:
- 2023
- Publication type:
- Correction Notice
scHiMe: predicting single-cell DNA methylation levels based on single-cell Hi-C data.
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- Briefings in Bioinformatics, 2023, v. 24, n. 4, p. 1, doi. 10.1093/bib/bbad223
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- Publication type:
- Article
Deep enhanced constraint clustering based on contrastive learning for scRNA-seq data.
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- Briefings in Bioinformatics, 2023, v. 24, n. 4, p. 1, doi. 10.1093/bib/bbad222
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- Publication type:
- Article
Improved the heterodimer protein complex prediction with protein language models.
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- Briefings in Bioinformatics, 2023, v. 24, n. 4, p. 1, doi. 10.1093/bib/bbad221
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- Publication type:
- Article
Rigorous benchmarking of T-cell receptor repertoire profiling methods for cancer RNA sequencing.
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- Briefings in Bioinformatics, 2023, v. 24, n. 4, p. 1, doi. 10.1093/bib/bbad220
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- Publication type:
- Article
GraphGPSM: a global scoring model for protein structure using graph neural networks.
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- Briefings in Bioinformatics, 2023, v. 24, n. 4, p. 1, doi. 10.1093/bib/bbad219
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- Publication type:
- Article
Uni-GBSA: an open-source and web-based automatic workflow to perform MM/GB(PB)SA calculations for virtual screening.
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- Briefings in Bioinformatics, 2023, v. 24, n. 4, p. 1, doi. 10.1093/bib/bbad218
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- Publication type:
- Article
Improved structure-related prediction for insufficient homologous proteins using MSA enhancement and pre-trained language model.
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- Briefings in Bioinformatics, 2023, v. 24, n. 4, p. 1, doi. 10.1093/bib/bbad217
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- Publication type:
- Article
scDFC: A deep fusion clustering method for single-cell RNA-seq data.
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- Briefings in Bioinformatics, 2023, v. 24, n. 4, p. 1, doi. 10.1093/bib/bbad216
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- Publication type:
- Article
MCFF-MTDDI: multi-channel feature fusion for multi-typed drug–drug interaction prediction.
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- Briefings in Bioinformatics, 2023, v. 24, n. 4, p. 1, doi. 10.1093/bib/bbad215
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- Publication type:
- Article
TRAmHap: accurate prediction of transcriptional activity from DNA methylation haplotypes in bisulfite-sequencing data.
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- Briefings in Bioinformatics, 2023, v. 24, n. 4, p. 1, doi. 10.1093/bib/bbad214
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- Publication type:
- Article
Evaluation of sequence-based predictors for phase-separating protein.
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- Briefings in Bioinformatics, 2023, v. 24, n. 4, p. 1, doi. 10.1093/bib/bbad213
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- Publication type:
- Article
DAmiRLocGNet: miRNA subcellular localization prediction by combining miRNA–disease associations and graph convolutional networks.
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- Briefings in Bioinformatics, 2023, v. 24, n. 4, p. 1, doi. 10.1093/bib/bbad212
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- Publication type:
- Article
Correction to: DeepFormer: a hybrid network based on convolutional neural network and flow-attention mechanism for identifying the function of DNA sequences.
- Published in:
- 2023
- Publication type:
- Correction Notice
Machine learning modeling of RNA structures: methods, challenges and future perspectives.
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- Briefings in Bioinformatics, 2023, v. 24, n. 4, p. 1, doi. 10.1093/bib/bbad210
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- Publication type:
- Article
TIMER is a Siamese neural network-based framework for identifying both general and species-specific bacterial promoters.
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- Briefings in Bioinformatics, 2023, v. 24, n. 4, p. 1, doi. 10.1093/bib/bbad209
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- Publication type:
- Article
A Bayesian approach to estimate MHC-peptide binding threshold.
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- Briefings in Bioinformatics, 2023, v. 24, n. 4, p. 1, doi. 10.1093/bib/bbad208
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- Publication type:
- Article
MATTE: a pipeline of transcriptome module alignment for anti-noise phenotype-gene-related analysis.
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- Briefings in Bioinformatics, 2023, v. 24, n. 4, p. 1, doi. 10.1093/bib/bbad207
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- Publication type:
- Article
Structure-based pathogenicity relationship identifier for predicting effects of single missense variants and discovery of higher-order cancer susceptibility clusters of mutations.
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- Briefings in Bioinformatics, 2023, v. 24, n. 4, p. 1, doi. 10.1093/bib/bbad206
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- Publication type:
- Article
A systematic review of computational methods for designing efficient guides for CRISPR DNA base editor systems.
- Published in:
- Briefings in Bioinformatics, 2023, v. 24, n. 4, p. 1, doi. 10.1093/bib/bbad205
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- Publication type:
- Article