Works matching IS 14675463 AND DT 2023 AND VI 24 AND IP 3
Results: 87
DiMo: discovery of microRNA motifs using deep learning and motif embedding.
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- Briefings in Bioinformatics, 2023, v. 24, n. 3, p. 1, doi. 10.1093/bib/bbad182
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- Article
P-CSN: single-cell RNA sequencing data analysis by partial cell-specific network.
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- Briefings in Bioinformatics, 2023, v. 24, n. 3, p. 1, doi. 10.1093/bib/bbad180
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scAnno: a deconvolution strategy-based automatic cell type annotation tool for single-cell RNA-sequencing data sets.
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- Briefings in Bioinformatics, 2023, v. 24, n. 3, p. 1, doi. 10.1093/bib/bbad179
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- Article
Artificial intelligence-enabled microbiome-based diagnosis models for a broad spectrum of cancer types.
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- Briefings in Bioinformatics, 2023, v. 24, n. 3, p. 1, doi. 10.1093/bib/bbad178
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- Article
Editorial.
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- 2023
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- Editorial
Quantitative annotations of T-Cell repertoire specificity.
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- Briefings in Bioinformatics, 2023, v. 24, n. 3, p. 1, doi. 10.1093/bib/bbad175
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- Article
McAN: a novel computational algorithm and platform for constructing and visualizing haplotype networks.
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- Briefings in Bioinformatics, 2023, v. 24, n. 3, p. 1, doi. 10.1093/bib/bbad174
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- Article
ATTIC is an integrated approach for predicting A-to-I RNA editing sites in three species.
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- Briefings in Bioinformatics, 2023, v. 24, n. 3, p. 1, doi. 10.1093/bib/bbad170
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SLHSD: hybrid scaffolding method based on short and long reads.
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- Briefings in Bioinformatics, 2023, v. 24, n. 3, p. 1, doi. 10.1093/bib/bbad169
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- Article
Translational informatics for human microbiota: data resources, models and applications.
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- Briefings in Bioinformatics, 2023, v. 24, n. 3, p. 1, doi. 10.1093/bib/bbad168
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- Article
KGANSynergy: knowledge graph attention network for drug synergy prediction.
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- Briefings in Bioinformatics, 2023, v. 24, n. 3, p. 1, doi. 10.1093/bib/bbad167
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- Article
InferLoop: leveraging single-cell chromatin accessibility for the signal of chromatin loop.
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- Briefings in Bioinformatics, 2023, v. 24, n. 3, p. 1, doi. 10.1093/bib/bbad166
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- Article
LPAD: using network construction and label propagation to detect topologically associating domains from Hi-C data.
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- Briefings in Bioinformatics, 2023, v. 24, n. 3, p. 1, doi. 10.1093/bib/bbad165
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- Article
STMHCpan, an accurate Star-Transformer-based extensible framework for predicting MHC I allele binding peptides.
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- Briefings in Bioinformatics, 2023, v. 24, n. 3, p. 1, doi. 10.1093/bib/bbad164
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- Article
Concepts and methods for transcriptome-wide prediction of chemical messenger RNA modifications with machine learning.
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- Briefings in Bioinformatics, 2023, v. 24, n. 3, p. 1, doi. 10.1093/bib/bbad163
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- Article
A survey on computational strategies for genome-resolved gut metagenomics.
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- Briefings in Bioinformatics, 2023, v. 24, n. 3, p. 1, doi. 10.1093/bib/bbad162
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- Article
Multi-modality attribute learning-based method for drug–protein interaction prediction based on deep neural network.
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- Briefings in Bioinformatics, 2023, v. 24, n. 3, p. 1, doi. 10.1093/bib/bbad161
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- Article
Leveraging developmental landscapes for model selection in Boolean gene regulatory networks.
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- Briefings in Bioinformatics, 2023, v. 24, n. 3, p. 1, doi. 10.1093/bib/bbad160
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- Article
Benchmarking of analytical combinations for COVID-19 outcome prediction using single-cell RNA sequencing data.
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- Briefings in Bioinformatics, 2023, v. 24, n. 3, p. 1, doi. 10.1093/bib/bbad159
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- Article
MKMR: a multi-kernel machine regression model to predict health outcomes using human microbiome data.
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- Briefings in Bioinformatics, 2023, v. 24, n. 3, p. 1, doi. 10.1093/bib/bbad158
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- Article
CosTaL: an accurate and scalable graph-based clustering algorithm for high-dimensional single-cell data analysis.
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- Briefings in Bioinformatics, 2023, v. 24, n. 3, p. 1, doi. 10.1093/bib/bbad157
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A survey on algorithms to characterize transcription factor binding sites.
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- Briefings in Bioinformatics, 2023, v. 24, n. 3, p. 1, doi. 10.1093/bib/bbad156
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Computational approaches for circRNAs prediction and in silico characterization.
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- Briefings in Bioinformatics, 2023, v. 24, n. 3, p. 1, doi. 10.1093/bib/bbad154
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Machine learning for RNA 2D structure prediction benchmarked on experimental data.
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- Briefings in Bioinformatics, 2023, v. 24, n. 3, p. 1, doi. 10.1093/bib/bbad153
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- Article
Dimensionality reduction and visualization of single-cell RNA-seq data with an improved deep variational autoencoder.
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- Briefings in Bioinformatics, 2023, v. 24, n. 3, p. 1, doi. 10.1093/bib/bbad152
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- Article
Recent application of artificial intelligence on histopathologic image-based prediction of gene mutation in solid cancers.
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- Briefings in Bioinformatics, 2023, v. 24, n. 3, p. 1, doi. 10.1093/bib/bbad151
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A comprehensive assessment and comparison of tools for HLA class I peptide-binding prediction.
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- Briefings in Bioinformatics, 2023, v. 24, n. 3, p. 1, doi. 10.1093/bib/bbad150
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- Article
SSNMDI: a novel joint learning model of semi-supervised non-negative matrix factorization and data imputation for clustering of single-cell RNA-seq data.
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- Briefings in Bioinformatics, 2023, v. 24, n. 3, p. 1, doi. 10.1093/bib/bbad149
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A strategy combining denoising and cryo-EM single particle analysis.
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- Briefings in Bioinformatics, 2023, v. 24, n. 3, p. 1, doi. 10.1093/bib/bbad148
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- Article
Short human eccDNAs are predictable from sequences.
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- Briefings in Bioinformatics, 2023, v. 24, n. 3, p. 1, doi. 10.1093/bib/bbad147
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- Article
Graph deep learning enabled spatial domains identification for spatial transcriptomics.
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- Briefings in Bioinformatics, 2023, v. 24, n. 3, p. 1, doi. 10.1093/bib/bbad146
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- Article
Improving drug-target affinity prediction via feature fusion and knowledge distillation.
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- Briefings in Bioinformatics, 2023, v. 24, n. 3, p. 1, doi. 10.1093/bib/bbad145
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- Article
An automatic immunofluorescence pattern classification framework for HEp-2 image based on supervised learning.
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- Briefings in Bioinformatics, 2023, v. 24, n. 3, p. 1, doi. 10.1093/bib/bbad144
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- Article
Potential of dissimilarity measure-based computation of protein thermal stability data for determining protein interactions.
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- Briefings in Bioinformatics, 2023, v. 24, n. 3, p. 1, doi. 10.1093/bib/bbad143
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- Article
Decoding Connectivity Map-based drug repurposing for oncotherapy.
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- Briefings in Bioinformatics, 2023, v. 24, n. 3, p. 1, doi. 10.1093/bib/bbad142
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- Article
SmartGate is a spatial metabolomics tool for resolving tissue structures.
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- Briefings in Bioinformatics, 2023, v. 24, n. 3, p. 1, doi. 10.1093/bib/bbad141
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- Article
Sars-escape network for escape prediction of SARS-COV-2.
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- Briefings in Bioinformatics, 2023, v. 24, n. 3, p. 1, doi. 10.1093/bib/bbad140
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Evaluation of epitranscriptome-wide N6-methyladenosine differential analysis methods.
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- Briefings in Bioinformatics, 2023, v. 24, n. 3, p. 1, doi. 10.1093/bib/bbad139
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Quantitative model for genome-wide cyclic AMP receptor protein binding site identification and characteristic analysis.
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- Briefings in Bioinformatics, 2023, v. 24, n. 3, p. 1, doi. 10.1093/bib/bbad138
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A novel heterophilic graph diffusion convolutional network for identifying cancer driver genes.
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- Briefings in Bioinformatics, 2023, v. 24, n. 3, p. 1, doi. 10.1093/bib/bbad137
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BindingSite-AugmentedDTA: enabling a next-generation pipeline for interpretable prediction models in drug repurposing.
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- Briefings in Bioinformatics, 2023, v. 24, n. 3, p. 1, doi. 10.1093/bib/bbad136
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- Article
UniDL4BioPep: a universal deep learning architecture for binary classification in peptide bioactivity.
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- Briefings in Bioinformatics, 2023, v. 24, n. 3, p. 1, doi. 10.1093/bib/bbad135
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Correction to: Quantum computing algorithms: getting closer to critical problems in computational biology.
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- 2023
- Publication type:
- Correction Notice
Decoding CRISPR–Cas PAM recognition with UniDesign.
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- Briefings in Bioinformatics, 2023, v. 24, n. 3, p. 1, doi. 10.1093/bib/bbad133
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TripletCell: a deep metric learning framework for accurate annotation of cell types at the single-cell level.
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- Briefings in Bioinformatics, 2023, v. 24, n. 3, p. 1, doi. 10.1093/bib/bbad132
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Using traditional machine learning and deep learning methods for on- and off-target prediction in CRISPR/Cas9: a review.
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- Briefings in Bioinformatics, 2023, v. 24, n. 3, p. 1, doi. 10.1093/bib/bbad131
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- Article
Matching single cells across modalities with contrastive learning and optimal transport.
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- Briefings in Bioinformatics, 2023, v. 24, n. 3, p. 1, doi. 10.1093/bib/bbad130
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NSRGRN: a network structure refinement method for gene regulatory network inference.
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- Briefings in Bioinformatics, 2023, v. 24, n. 3, p. 1, doi. 10.1093/bib/bbad129
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- Article
Correction to: Molecular persistent spectral image (Mol-PSI) representation for machine learning models in drug design.
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- Briefings in Bioinformatics, 2023, v. 24, n. 3, p. 1, doi. 10.1093/bib/bbad128
- Publication type:
- Article
Transformer-based anti-noise models for CRISPR-Cas9 off-target activities prediction.
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- Briefings in Bioinformatics, 2023, v. 24, n. 3, p. 1, doi. 10.1093/bib/bbad127
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- Article