Works matching IS 14675463 AND DT 2019 AND VI 20 AND IP 1

Results: 31

Web-based drug repurposing tools: a survey.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 1, p. 299, doi. 10.1093/bib/bbx125

By:

Sam, Elizabeth;
Athri, Prashanth

Publication type:

Article

VirGenA: a reference-based assembler for variable viral genomes.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 1, p. 15, doi. 10.1093/bib/bbx079

By:

Fedonin, Gennady G;
Fantin, Yury S;
Favorov, Alexnader V;
Shipulin, German A;
Neverov, Alexey D

Publication type:

Article

Understanding the disease genome: gene essentiality and the interplay of selection, recombination and mutation.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 1, p. 267, doi. 10.1093/bib/bbx110

By:

Pengelly, Reuben J;
Vergara-Lope, Alejandra;
Alyousfi, Dareen;
Jabalameli, M Reza;
Collins, Andrew

Publication type:

Article

Systematic review regulatory principles of non-coding RNAs in cardiovascular diseases.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 1, p. 66, doi. 10.1093/bib/bbx095

By:

Li, Yongsheng;
Huo, Caiqin;
Pan, Tao;
Li, Lili;
Jin, Xiyun;
Lin, Xiaoyu;
Chen, Juan;
Zhang, Jinwen;
Guo, Zheng;
Xu, Juan;
Li, Xia

Publication type:

Article

Systematic comparative study of computational methods for T-cell receptor sequencing data analysis.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 1, p. 222, doi. 10.1093/bib/bbx111

By:

Afzal, Saira;
Gil-Farina, Irene;
Gabriel, Richard;
Ahmad, Shahzad;
Kalle, Christof von;
Schmidt, Manfred;
Fronza, Raffaele

Publication type:

Article

Principal component analysis of binary genomics data.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 1, p. 317, doi. 10.1093/bib/bbx119

By:

Song, Yipeng;
Westerhuis, Johan A;
Aben, Nanne;
Michaut, Magali;
Wessels, Lodewyk F A;
Smilde, Age K

Publication type:

Article

Pathway enrichment analysis approach based on topological structure and updated annotation of pathway.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 1, p. 168, doi. 10.1093/bib/bbx091

By:

Yang, Qian;
Wang, Shuyuan;
Dai, Enyu;
Zhou, Shunheng;
Liu, Dianming;
Liu, Haizhou;
Meng, Qianqian;
Jiang, Bin;
Jiang, Wei

Publication type:

Article

OPATs: Omnibus P -value association tests.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 1, p. 1, doi. 10.1093/bib/bbx068

By:

Chen, Chia-Wei;
Yang, Hsin-Chou

Publication type:

Article

On the dynamical incompleteness of the Protein Data Bank.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 1, p. 356, doi. 10.1093/bib/bbx084

By:

Marino-Buslje, Cristina;
Monzon, Alexander Miguel;
Zea, Diego Javier;
Fornasari, María Silvina;
Parisi, Gustavo

Publication type:

Article

MetSigDis: a manually curated resource for the metabolic signatures of diseases.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 1, p. 203, doi. 10.1093/bib/bbx103

By:

Cheng, Liang;
Yang, Haixiu;
Zhao, Hengqiang;
Pei, Xiaoya;
Shi, Hongbo;
Sun, Jie;
Zhang, Yunpeng;
Wang, Zhenzhen;
Zhou, Meng

Publication type:

Article

Federation in genomics pipelines: techniques and challenges.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 1, p. 235, doi. 10.1093/bib/bbx102

By:

Chaterji, Somali;
Koo, Jinkyu;
Li, Ninghui;
Meyer, Folker;
Grama, Ananth;
Bagchi, Saurabh

Publication type:

Article

Integrating regulatory features data for prediction of functional disease-associated SNPs.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 1, p. 26, doi. 10.1093/bib/bbx094

By:

Dong, Shan-Shan;
Guo, Yan;
Yao, Shi;
Chen, Yi-Xiao;
He, Mo-Nan;
Zhang, Yu-Jie;
Chen, Xiao-Feng;
Chen, Jia-Bin;
Yang, Tie-Lin

Publication type:

Article

Identifying mutual exclusivity across cancer genomes: computational approaches to discover genetic interaction and reveal tumor vulnerability.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 1, p. 254, doi. 10.1093/bib/bbx109

By:

Deng, Yulan;
Luo, Shangyi;
Deng, Chunyu;
Luo, Tao;
Yin, Wenkang;
Zhang, Hongyi;
Zhang, Yong;
Zhang, Xinxin;
Lan, Yujia;
Ping, Yanyan;
Xiao, Yun;
Li, Xia

Publication type:

Article

Computational approaches for discovery of mutational signatures in cancer.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 1, p. 77, doi. 10.1093/bib/bbx082

By:

Baez-Ortega, Adrian;
Gori, Kevin

Publication type:

Article

comprehensive review and comparison of existing computational methods for intrinsically disordered protein and region prediction.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 1, p. 330, doi. 10.1093/bib/bbx126

By:

Liu, Yumeng;
Wang, Xiaolong;
Liu, Bin

Publication type:

Article

Large-scale prediction of ADAR-mediated effective human A-to-I RNA editing.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 1, p. 102, doi. 10.1093/bib/bbx092

By:

Yao, Li;
Wang, Heming;
Song, Yuanyuan;
Dai, Zhen;
Yu, Hao;
Yin, Ming;
Wang, Dongxu;
Yang, Xin;
Wang, Jinlin;
Wang, Tiedong;
Cao, Nan;
Zhu, Jimin;
Shen, Xizhong;
Song, Guangqi;
Zhao, Yicheng

Publication type:

Article

Detecting differential DNA methylation from sequencing of bisulfite converted DNA of diverse species.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 1, p. 33, doi. 10.1093/bib/bbx077

By:

Huh, Iksoo;
Wu, Xin;
Park, Taesung;
Yi, Soojin V

Publication type:

Article

Critical assessment and performance improvement of plant–pathogen protein–protein interaction prediction methods.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 1, p. 274, doi. 10.1093/bib/bbx123

By:

Yang, Shiping;
Li, Hong;
He, Huaqin;
Zhou, Yuan;
Zhang, Ziding

Publication type:

Article

Computational resources for ribosome profiling: from database to Web server and software.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 1, p. 144, doi. 10.1093/bib/bbx093

By:

Wang, Hongwei;
Wang, Yan;
Xie, Zhi

Publication type:

Article

Facilitating prediction of adverse drug reactions by using knowledge graphs and multi-label learning models.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 1, p. 190, doi. 10.1093/bib/bbx099

By:

Muñoz, Emir;
Nováček, Vít;
Vandenbussche, Pierre-Yves

Publication type:

Article

Discovering cooperative biomarkers for heterogeneous complex disease diagnoses.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 1, p. 89, doi. 10.1093/bib/bbx090

By:

Sun, Duanchen;
Ren, Xianwen;
Ari, Eszter;
Korcsmaros, Tamas;
Csermely, Peter;
Wu, Ling-Yun

Publication type:

Article

comparative study of rank aggregation methods for partial and top ranked lists in genomic applications.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 1, p. 178, doi. 10.1093/bib/bbx101

By:

Li, Xue;
Wang, Xinlei;
Xiao, Guanghua

Publication type:

Article

Comparative analysis of differential gene expression tools for RNA sequencing time course data.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 1, p. 288, doi. 10.1093/bib/bbx115

By:

Spies, Daniel;
Renz, Peter F;
Beyer, Tobias A;
Ciaudo, Constance

Publication type:

Article

Accounting for differential variability in detecting differentially methylated regions.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 1, p. 47, doi. 10.1093/bib/bbx097

By:

Wang, Ya;
Teschendorff, Andrew E;
Widschwendter, Martin;
Wang, Shuang

Publication type:

Article

Big data management challenges in health research—a literature review.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 1, p. 156, doi. 10.1093/bib/bbx086

By:

Wang, Xiaoming;
Williams, Carolyn;
Liu, Zhen Hua;
Croghan, Joe

Publication type:

Article

AtCircDB: a tissue-specific database for Arabidopsis circular RNAs.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 1, p. 58, doi. 10.1093/bib/bbx089

By:

Ye, Jiazhen;
Wang, Lin;
Li, Shuzhang;
Zhang, Qinran;
Zhang, Qinglei;
Tang, Wenhao;
Wang, Kai;
Song, Kun;
Sablok, Gaurav;
Sun, Xiaoyong;
Zhao, Hongwei

Publication type:

Article

Association score testing for rare variants and binary traits in family data with shared controls.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 1, p. 245, doi. 10.1093/bib/bbx107

By:

Saad, Mohamad;
Wijsman, Ellen M

Publication type:

Article

Advanced bioinformatics methods for practical applications in proteomics.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 1, p. 347, doi. 10.1093/bib/bbx128

By:

Goh, Wilson Wen Bin;
Wong, Limsoon

Publication type:

Article

broken promise: microbiome differential abundance methods do not control the false discovery rate.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 1, p. 210, doi. 10.1093/bib/bbx104

By:

Hawinkel, Stijn;
Mattiello, Federico;
Bijnens, Luc;
Thas, Olivier

Publication type:

Article

account of in silico identification tools of secreted effector proteins in bacteria and future challenges.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 1, p. 110, doi. 10.1093/bib/bbx078

By:

Zeng, Cong;
Zou, Lingyun

Publication type:

Article

'Multi-omic' data analysis using O-miner.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 1, p. 130, doi. 10.1093/bib/bbx080

By:

Sangaralingam, Ajanthah;
Ullah, Abu Z Dayem;
Marzec, Jacek;
Gadaleta, Emanuela;
Nagano, Ai;
Ross-Adams, Helen;
Wang, Jun;
Lemoine, Nicholas R;
Chelala, Claude

Publication type:

Article