Works matching IS 1438-793X AND VI 23 AND IP 4 AND DT 2023

Results: 58

IGF2 is upregulated by its antisense RNA to potentiate pancreatic cancer progression.

Published in:

Functional & Integrative Genomics, 2023, v. 23, n. 4, p. 1, doi. 10.1007/s10142-023-01277-9

By:

Tian, Yuan;
Han, Wenwen;
Fu, Long;
Zhang, Jing;
Zhou, Xinhua

Publication type:

Article

Benchmarking of bioinformatics tools for NGS-based microRNA profiling with RT-qPCR method.

Published in:

Functional & Integrative Genomics, 2023, v. 23, n. 4, p. 1, doi. 10.1007/s10142-023-01276-w

By:

Pawlina-Tyszko, Klaudia;
Szmatoła, Tomasz

Publication type:

Article

Combining single-cell RNA sequencing data and transcriptomic data to unravel potential mechanisms and signature genes of the progression of idiopathic pulmonary fibrosis to lung adenocarcinoma and predict therapeutic agents.

Published in:

Functional & Integrative Genomics, 2023, v. 23, n. 4, p. 1, doi. 10.1007/s10142-023-01274-y

By:

Zhou, Xianqiang;
Tan, Fang;
Zhang, Suxian;
Zhang, Tiansong

Publication type:

Article

Nrf2 attenuates oxidative stress to mediate the protective effect of ciprofol against cerebral ischemia–reperfusion injury.

Published in:

Functional & Integrative Genomics, 2023, v. 23, n. 4, p. 1, doi. 10.1007/s10142-023-01273-z

By:

Liu, Xia;
Ren, Miao;
Zhang, Anqi;
Huang, Changshun;
Wang, Junlu

Publication type:

Article

NLRP3/miR-223-3p axis attenuates neuroinflammation induced by chronic intermittent hypoxia.

Published in:

Functional & Integrative Genomics, 2023, v. 23, n. 4, p. 1, doi. 10.1007/s10142-023-01268-w

By:

Wu, Cheng;
Xing, Wen;
Zhang, Yuanxiang;
Wang, Jue;
Zuo, Na;
Sun, Fuqin;
Liu, Qi;
Liu, Shaofeng

Publication type:

Article

The cellular trajectories of tumor-associated macrophages decipher the heterogeneity of pancreatic cancer.

Published in:

Functional & Integrative Genomics, 2023, v. 23, n. 4, p. 1, doi. 10.1007/s10142-023-01266-y

By:

Lin, Jiajing;
Lu, Fengchun;
Wu, Yuwei;
Huang, Heguang;
Pan, Yu

Publication type:

Article

Comparative transcriptome analysis reveals candidate genes related to the sex differentiation of Schisandra chinensis.

Published in:

Functional & Integrative Genomics, 2023, v. 23, n. 4, p. 1, doi. 10.1007/s10142-023-01264-0

By:

Cheng, Ji-Long;
Wei, Xue-Ping;
Chen, Yu;
Qi, Yao-Dong;
Zhang, Ben-Gang;
Liu, Hai-Tao

Publication type:

Article

3′-tRF-Cys<sup>GCA</sup> overexpression in HEK-293 cells alters the global expression profile and modulates cellular processes and pathways.

Published in:

Functional & Integrative Genomics, 2023, v. 23, n. 4, p. 1, doi. 10.1007/s10142-023-01272-0

By:

Karousi, Paraskevi;
Samiotaki, Martina;
Makridakis, Manousos;
Zoidakis, Jerome;
Sideris, Diamantis C.;
Scorilas, Andreas;
Carell, Thomas;
Kontos, Christos K.

Publication type:

Article

CFAP61 knockdown aggravates male infertility by inhibiting testosterone secretion by Leydig cells via the MAPK/COX-2 pathway.

Published in:

Functional & Integrative Genomics, 2023, v. 23, n. 4, p. 1, doi. 10.1007/s10142-023-01271-1

By:

Zhu, Wenkai;
Mao, Jing;
Qin, Jianxin;
Chen, Xia

Publication type:

Article

Hypoxia-induced circRTN4IP1 promotes progression and glycolysis of hepatocellular carcinoma cells.

Published in:

Functional & Integrative Genomics, 2023, v. 23, n. 4, p. 1, doi. 10.1007/s10142-023-01256-0

By:

Yang, Xijing;
Lou, Cheng;
Zhang, Qing;
Liu, Guofang;
Ding, Yongmei;
Zhang, Qian;
Ye, Chun

Publication type:

Article

Validating post-enrichment steps in environmental RNA analysis for improving its availability from water samples.

Published in:

Functional & Integrative Genomics, 2023, v. 23, n. 4, p. 1, doi. 10.1007/s10142-023-01269-9

By:

Jo, Toshiaki S.

Publication type:

Article

Novel insights into molecular signatures and pathogenic cell populations shared by systemic lupus erythematosus and vascular dementia.

Published in:

Functional & Integrative Genomics, 2023, v. 23, n. 4, p. 1, doi. 10.1007/s10142-023-01270-2

By:

Chen, Jing;
Zhao, Xiao’feng;
Huang, Cheng;
Lin, Jia’xing

Publication type:

Article

Meta-analysis of transcriptomics studies identifies novel attributes and set of genes involved in iron homeostasis in rice.

Published in:

Functional & Integrative Genomics, 2023, v. 23, n. 4, p. 1, doi. 10.1007/s10142-023-01265-z

By:

Shekhawat, Pooja Kanwar;
Sardar, Shaswati;
Yadav, Banita;
Salvi, Prafull;
Soni, Praveen;
Ram, Hasthi

Publication type:

Article

Long noncoding RNA LINC00482 silencing sensitizes non-small cell lung cancer cells to cisplatin by downregulating CLASRP via E2F1.

Published in:

Functional & Integrative Genomics, 2023, v. 23, n. 4, p. 1, doi. 10.1007/s10142-023-01260-4

By:

Lin, Yanming;
Li, Jinmei;
Li, Shujun;
Chen, Yuting;
Luo, Yiping;
Wang, Yongcun;
Yang, Zhixiong

Publication type:

Article

Xihuang pill facilitates glioma cell pyroptosis via the POU4F1/STAT3 axis.

Published in:

Functional & Integrative Genomics, 2023, v. 23, n. 4, p. 1, doi. 10.1007/s10142-023-01263-1

By:

Tang, Ning;
Zhu, Yuanyuan;
Yu, Jianbai

Publication type:

Article

A new efficient referential genome compression technique for FastQ files.

Published in:

Functional & Integrative Genomics, 2023, v. 23, n. 4, p. 1, doi. 10.1007/s10142-023-01259-x

By:

Kumar, Sanjeev;
Singh, Mukund Pratap;
Nayak, Soumya Ranjan;
Khan, Asif Uddin;
Jain, Anuj Kumar;
Singh, Prabhishek;
Diwakar, Manoj;
Soujanya, Thota

Publication type:

Article

CDK6 is a novel predictive and prognosis biomarker correlated with immune infiltrates in multiple human neoplasms, including small cell lung carcinoma.

Published in:

Functional & Integrative Genomics, 2023, v. 23, n. 4, p. 1, doi. 10.1007/s10142-023-01253-3

By:

Li, Guo-Sheng;
Huang, Zhi-Guang;
Li, Dong-Ming;
Tang, Yu-Lu;
Zheng, Jin-Hua;
Yang, Lin;
Feng, Yue;
Peng, Jun-Xi;
Li, Jing-Xiao;
Tang, Yu-Xing;
Zeng, Neng-Yong;
Jin, Mei-Hua;
Tian, Jia;
Liu, Jun;
Zhou, Hua-Fu;
Chen, Gang;
Chen, Feng

Publication type:

Article

Genome-wide association study for boll weight in Gossypium hirsutum races.

Published in:

Functional & Integrative Genomics, 2023, v. 23, n. 4, p. 1, doi. 10.1007/s10142-023-01261-3

By:

Wang, Yuanyuan;
Guo, Xinlei;
Xu, Yanchao;
Sun, Runrun;
Cai, Xiaoyan;
Zhou, Zhongli;
Qin, Tengfei;
Tao, Ye;
Li, Baihui;
Hou, Yuqing;
Wang, Qinglian;
Liu, Fang

Publication type:

Article

De novo genome assembly and annotation of the medicinal plant Tinospora cordifolia (Willd.) Miers ex Hook. f. & Thom’s.

Published in:

Functional & Integrative Genomics, 2023, v. 23, n. 4, p. 1, doi. 10.1007/s10142-023-01262-2

By:

R, Namitha;
KH, Manasa;
Hegde, Santhosh N;
Begum, Noorunnisa;
Kukkupuni, Subrahmanya Kumar;
Gowda, Malali;
Narendran, Pavithra

Publication type:

Article

Long non-coding RNA MIR22HG suppresses the chondrogenic differentiation of human adipose-derived stem cells by interacting with CTCF to upregulate CRLF1.

Published in:

Functional & Integrative Genomics, 2023, v. 23, n. 4, p. 1, doi. 10.1007/s10142-023-01248-0

By:

Guo, Jiajia;
Ye, Wang;
Wu, Xinglin;
Huang, Haifeng;
Li, Bo;
Ren, Zhijing;
Yang, Zhen

Publication type:

Article

IL-1R8 expression in DLBCL regulates NK cell recruitment and influences patient prognosis.

Published in:

Functional & Integrative Genomics, 2023, v. 23, n. 4, p. 1, doi. 10.1007/s10142-023-01254-2

By:

Yu, Min;
Zhang, Qian;
Wan, Luying;
Wang, Shixuan;
Zou, Lifang;
Chen, Zhiwei;
Li, Fei

Publication type:

Article

Depletion of PIEZO1 expression is accompanied by upregulating p53 signaling in mice with perioperative neurocognitive disorder.

Published in:

Functional & Integrative Genomics, 2023, v. 23, n. 4, p. 1, doi. 10.1007/s10142-023-01258-y

By:

Bai, Fuhai;
Huang, Lu;
Long, Zonghong;
Zhang, Min;
Deng, Qiangting;
Huang, Jing;
Bao, Xiaohang;
Hao, Xianglin;
Li, Hong

Publication type:

Article

DAB2IP stabilizes p27<sup>Kip1</sup> via suppressing PI3K/AKT signaling in clear cell renal cell carcinoma.

Published in:

Functional & Integrative Genomics, 2023, v. 23, n. 4, p. 1, doi. 10.1007/s10142-023-01255-1

By:

Zhou, Jiancheng;
Deng, Zhuo;
Pei, Xinqi;
Lai, Jiawei;
Qu, Weixing

Publication type:

Article

Architecture and topologies of gene regulatory networks associated with breast cancer, adjacent normal, and normal tissues.

Published in:

Functional & Integrative Genomics, 2023, v. 23, n. 4, p. 1, doi. 10.1007/s10142-023-01251-5

By:

Kumar, Swapnil;
Vindal, Vaibhav

Publication type:

Article

DNA hypomethylation by fisetin preserves mitochondria functional genes and contributes to the protection of I/R rat heart.

Published in:

Functional & Integrative Genomics, 2023, v. 23, n. 4, p. 1, doi. 10.1007/s10142-023-01257-z

By:

Boovarahan, Sri Rahavi;
Balu, Kirankumar;
Prem, Priyanka;
Sivakumar, Bhavana;
Kurian, Gino A.

Publication type:

Article

miR-21-5p inhibits the growth of brain glioma cells through regulating the glycolysis mediated by PFKFB2.

Published in:

Functional & Integrative Genomics, 2023, v. 23, n. 4, p. 1, doi. 10.1007/s10142-023-01246-2

By:

Zhang, Lei;
Liu, Jianmin

Publication type:

Article

Mitochondria-related lncRNAs: predicting prognosis, tumor microenvironment and treatment response in lung adenocarcinoma.

Published in:

Functional & Integrative Genomics, 2023, v. 23, n. 4, p. 1, doi. 10.1007/s10142-023-01245-3

By:

Zhou, Qianhui;
Xiong, Jiali;
Gao, Yan;
Yi, Rong;
Xu, Yuzhu;
Chen, Quefei;
Wang, Lin;
Chen, Ying

Publication type:

Article

Formononetin ameliorates the LPS-induced inflammatory response and apoptosis of neuronal cells via NF-κB/NLRP3 signaling pathway.

Published in:

Functional & Integrative Genomics, 2023, v. 23, n. 4, p. 1, doi. 10.1007/s10142-023-01247-1

By:

Zhou, Zhijing;
Zhang, Peng

Publication type:

Article

UDP-glycosyltransferase gene SlUGT73C1 from Solanum lycopersicum regulates salt and drought tolerance in Arabidopsis thaliana L.

Published in:

Functional & Integrative Genomics, 2023, v. 23, n. 4, p. 1, doi. 10.1007/s10142-023-01242-6

By:

Lu, Mengdi;
Guo, Jing;
Dong, Dingxiao;
Zhang, Meiyu;
Li, Qian;
Cao, Yaoliang;
Dong, Yanlong;
Chen, Chao;
Jin, Xiaoxia

Publication type:

Article

Correction to: Genetic modification strategies for enhancing plant resilience to abiotic stresses in the context of climate change.

Published in:

2023

By:

Khokhar, Amman;
Shahbaz, Muhammad;
Maqsood, Muhammad Faisal;
Zulfiqar, Usman;
Naz, Nargis;
Iqbal, Usama Zafar;
Sara, Maheen;
Aqeel, Muhammad;
Khalid, Noreen;
Noman, Ali;
Zulfiqar, Faisal;
Al Syaad, Khalid M.;
AlShaqhaa, Manal Abdullah

Publication type:

Correction Notice

DEL variants: review of molecular mechanisms, clinical consequences and molecular testing strategy.

Published in:

Functional & Integrative Genomics, 2023, v. 23, n. 4, p. 1, doi. 10.1007/s10142-023-01249-z

By:

Yin, Qinan

Publication type:

Article

Negative regulators of grain yield and mineral contents in rice: potential targets for CRISPR-Cas9-mediated genome editing.

Published in:

Functional & Integrative Genomics, 2023, v. 23, n. 4, p. 1, doi. 10.1007/s10142-023-01244-4

By:

Yadav, Banita;
Majhi, Ashis;
Phagna, Kanika;
Meena, Mukesh Kumar;
Ram, Hasthi

Publication type:

Article

Unveiling immunogenic cell death–related genes in colorectal cancer: an integrated study incorporating transcriptome and Mendelian randomization analyses.

Published in:

Functional & Integrative Genomics, 2023, v. 23, n. 4, p. 1, doi. 10.1007/s10142-023-01238-2

By:

Shao, Yu;
Wang, Zhenling;
Wu, Jingyu;
Lu, Yunfei;
Chen, Yang;
Zhang, Hongqiang;
Huang, Changzhi;
Shen, Hengyang;
Xu, Lei;
Fu, Zan

Publication type:

Article

Correction to: Flavonoids: a review on biosynthesis and transportation mechanism in plants.

Published in:

2023

By:

Manzoor, Muhammad Aamir;
Sabir, Irfan Ali;
Shah, Iftikhar Hussain;
Riaz, Muhammad Waheed;
Rehman, Shamsur;
Song, Cheng;
Li, Gouhui;
Malik, M. Sanaullah;
Ashraf, Ghulam Abbas;
Haider, Muhammad Sajjad;
Cao, Yunpeng;
Abdullah, Muhammad

Publication type:

Correction Notice

Circular RNA eukaryotic translation initiation factor 6 facilitates TPC-1 cell proliferation and invasion through the microRNA-138-5p/lipase H axis.

Published in:

Functional & Integrative Genomics, 2023, v. 23, n. 4, p. 1, doi. 10.1007/s10142-023-01240-8

By:

Yi, Dan;
Zhang, Dongxin;
Zeng, Zhaohui;
Zhang, Shu;
Song, Beiping;
He, Chenkun;
Li, Min;
He, Jie

Publication type:

Article

PFT-α protects the blood-brain barrier through the Wnt/β-catenin pathway after acute ischemic stroke.

Published in:

Functional & Integrative Genomics, 2023, v. 23, n. 4, p. 1, doi. 10.1007/s10142-023-01237-3

By:

Zhang, Haitao;
Du, Deyong;
Gao, Xiaoning;
Tian, Xiaoling;
Xu, Yongqiang;
Wang, Bo;
Yang, Shoujuan;
Liu, Pengfei;
Li, Zefu

Publication type:

Article

miR-429 inhibits the formation of an immunosuppressive microenvironment to counteract hepatocellular carcinoma immune escape by targeting PD-L1.

Published in:

Functional & Integrative Genomics, 2023, v. 23, n. 4, p. 1, doi. 10.1007/s10142-023-01231-9

By:

Yu, Xuehai;
Fan, Xiongwei;
Zhang, Xusheng;
Wei, Peng;
Zhou, Hongcai;
Liu, Di;
Chen, Bendong

Publication type:

Article

Construction and application of a new watermelon germplasm with the phenotype of dwarf and branchless.

Published in:

Functional & Integrative Genomics, 2023, v. 23, n. 4, p. 1, doi. 10.1007/s10142-023-01239-1

By:

Dou, Junling;
Kang, Qishuai;
Li, Tengwei;
Umer, Muhammad Jawad;
Alharthi, Badr;
Liu, Dongming;
Yang, Sen;
Niu, Huanhuan;
Ma, Changsheng;
Zhu, Huayu;
Yang, Luming

Publication type:

Article

Identification, characterization, and comprehensive expression profiling of floral master regulators in pigeon pea (Cajanus cajan [L.] Millspaugh)

Published in:

Functional & Integrative Genomics, 2023, v. 23, n. 4, p. 1, doi. 10.1007/s10142-023-01236-4

By:

Bhattacharjee, Sougata;
Bhowmick, Rakesh;
Paul, Krishnayan;
Venkat Raman, K.;
Jaiswal, Sandeep;
Tilgam, Jyotsana;
Saakre, Manjesh;
Kumari, Priyanka;
Baaniya, Mahi;
Vijayan, Joshitha;
Sreevathsa, Rohini;
Pattanayak, Debasis

Publication type:

Article

Correction to: Genome‑wide association studies: an intuitive solution for SNP identification and gene mapping in trees.

Published in:

2023

By:

Ashwath, M. N.;
Lavale, Shivaji Ajinath;
Santhoshkumar, A. V.;
Mohapatra, Sourav Ranjan;
Bhardwaj, Ankita;
Dash, Umakanta;
Shiran, K.;
Samantara, Kajal;
Wani, Shabir Hussain

Publication type:

Correction Notice

Differential regulation of hippocampal transcriptome by circulating estrogen.

Published in:

Functional & Integrative Genomics, 2023, v. 23, n. 4, p. 1, doi. 10.1007/s10142-023-01234-6

By:

Iqbal, Javed;
Bibi, Maryam;
Huang, Geng-Di;
Xue, Yan-Xue;
Khatttak, Jabbar Zaman Khan;
Yang, Mei;
Jia, Xiao-Jian

Publication type:

Article

Multi-omics approaches establishing histone modification based prognostic model in glioma patients and further verification of the carcinogenesis mechanism.

Published in:

Functional & Integrative Genomics, 2023, v. 23, n. 4, p. 1, doi. 10.1007/s10142-023-01229-3

By:

Wang, Yunhui;
Ji, LiKang;
Ji, Chunfeng;
Wang, Fan

Publication type:

Article

CMTM6 as a potential therapy target is associated with immunological tumor microenvironment and can promote migration and invasion in pancreatic adenocarcinoma.

Published in:

Functional & Integrative Genomics, 2023, v. 23, n. 4, p. 1, doi. 10.1007/s10142-023-01235-5

By:

Gao, Hongli;
Yin, Jianqiao;
Guan, Xin;
Zhang, Shuang;
Peng, Songlin;
Liu, Xun;
Xing, Fei

Publication type:

Article

Double-stranded RNA mediated knockdown of sucrase gene induced mortality and reduced offspring production in Aphis gossypii.

Published in:

Functional & Integrative Genomics, 2023, v. 23, n. 4, p. 1, doi. 10.1007/s10142-023-01233-7

By:

Uma, Gadigavarahalli Subbareddy;
Saakre, Manjesh;
Singh, Jyoti;
Kalia, Vinay K.

Publication type:

Article

MPZL1 suppresses the cancer stem-like properties of lung cancer through β-catenin/TCF4 signaling.

Published in:

Functional & Integrative Genomics, 2023, v. 23, n. 4, p. 1, doi. 10.1007/s10142-023-01232-8

By:

Ge, Qiao;
Zhou, Chao;
Zang, Chao;
Li, Chao;
Hong, Haining;
Wang, Kangwu;
Chen, Liwei;
Zhu, Haonan;
Wang, Ansheng

Publication type:

Article

A novel artificial intelligence approach to detect the breast cancer using KNNet technique with EPM gene profiling.

Published in:

Functional & Integrative Genomics, 2023, v. 23, n. 4, p. 1, doi. 10.1007/s10142-023-01227-5

By:

Joshi, Shubham;
Natteshan, N. V. S.;
Rastogi, Ravi;
Sampathkumar, A.;
Pandimurugan, V.;
Sountharrajan, S.

Publication type:

Article

Single-cell transcriptome analysis revealing the intratumoral heterogeneity of ccRCC and validation of MT2A in pathogenesis.

Published in:

Functional & Integrative Genomics, 2023, v. 23, n. 4, p. 1, doi. 10.1007/s10142-023-01225-7

By:

Wang, Jie;
Zuo, Zili;
Yu, Zongze;
Chen, Zhigui;
Meng, Xiangdi;
Ma, Zhaosen;
Niu, Jiqiang;
Guo, Rui;
Tran, Lisa Jia;
Zhang, Jing;
Jiang, Tianxiao;
Ye, Fangdie;
Ma, Baoluo;
Sun, Zhou

Publication type:

Article

De novo transcriptome sequencing of drought tolerance–associated genes in little millet (Panicum sumatrense L.)

Published in:

Functional & Integrative Genomics, 2023, v. 23, n. 4, p. 1, doi. 10.1007/s10142-023-01221-x

By:

Narayanrao, Dhawale Ramesh;
Tomar, R. S.;
SM, Padhiyar;
Jasminkumar, Kheni;
Ashish, Gulwe;
Chauhan, Nitin Mahendra;
Singh, Suresh Chandra;
Upadhye, Vijay;
Kuddus, Mohammed;
Kamble, Laxmikant;
Hajare, Sunil Tulshiram

Publication type:

Article

Transcription factor Dp-1 knockdown downregulates thymidine kinase 1 expression to protect against proliferation and epithelial-mesenchymal transition in cervical cancer.

Published in:

Functional & Integrative Genomics, 2023, v. 23, n. 4, p. 1, doi. 10.1007/s10142-023-01218-6

By:

Wu, Mei;
Ye, Mingji

Publication type:

Article

Next-generation sequencing reveals altered gene expression and enriched pathways in triple-negative breast cancer cells treated with oleuropein and oleocanthal.

Published in:

Functional & Integrative Genomics, 2023, v. 23, n. 4, p. 1, doi. 10.1007/s10142-023-01230-w

By:

Karousi, Paraskevi;
Kontos, Christos K.;
Papakotsi, Panagiota;
Kostakis, Ioannis K.;
Skaltsounis, Alexios-Leandros;
Scorilas, Andreas

Publication type:

Article