Works matching IS 13674803 AND DT 2023 AND VI 39 AND IP 4
Results: 46
Primerdiffer: a python command-line module for large-scale primer design in haplotype genotyping.
- Published in:
- Bioinformatics, 2023, v. 39, n. 4, p. 1, doi. 10.1093/bioinformatics/btad188
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- Article
Decomposing mosaic tandem repeats accurately from long reads.
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- Bioinformatics, 2023, v. 39, n. 4, p. 1, doi. 10.1093/bioinformatics/btad185
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- Article
Summary statistics-based association test for identifying the pleiotropic effects with set of genetic variants.
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- Bioinformatics, 2023, v. 39, n. 4, p. 1, doi. 10.1093/bioinformatics/btad182
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- Article
streammd: fast low-memory duplicate marking using a Bloom filter.
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- Bioinformatics, 2023, v. 39, n. 4, p. 1, doi. 10.1093/bioinformatics/btad181
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- Article
Multiscale adaptive differential abundance analysis in microbial compositional data.
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- Bioinformatics, 2023, v. 39, n. 4, p. 1, doi. 10.1093/bioinformatics/btad178
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- Article
MARSY: a multitask deep-learning framework for prediction of drug combination synergy scores.
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- Bioinformatics, 2023, v. 39, n. 4, p. 1, doi. 10.1093/bioinformatics/btad177
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- Article
SmoothT—a server constructing low-energy pathways from conformational ensembles for interactive visualization and enhanced sampling.
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- Bioinformatics, 2023, v. 39, n. 4, p. 1, doi. 10.1093/bioinformatics/btad176
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- Article
Identification of protein–protein interaction bridges for multiple sclerosis.
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- Bioinformatics, 2023, v. 39, n. 4, p. 1, doi. 10.1093/bioinformatics/btad175
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- Article
K-RET: knowledgeable biomedical relation extraction system.
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- Bioinformatics, 2023, v. 39, n. 4, p. 1, doi. 10.1093/bioinformatics/btad174
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- Article
eccDB: a comprehensive repository for eccDNA-mediated chromatin contacts in multi-species.
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- Bioinformatics, 2023, v. 39, n. 4, p. 1, doi. 10.1093/bioinformatics/btad173
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- Article
sInterBase: a comprehensive database of Escherichia coli sRNA–mRNA interactions.
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- Bioinformatics, 2023, v. 39, n. 4, p. 1, doi. 10.1093/bioinformatics/btad172
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- Article
ChemGAPP: a tool for chemical genomics analysis and phenotypic profiling.
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- Bioinformatics, 2023, v. 39, n. 4, p. 1, doi. 10.1093/bioinformatics/btad171
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- Article
Population-based change-point detection for the identification of homozygosity islands.
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- Bioinformatics, 2023, v. 39, n. 4, p. 1, doi. 10.1093/bioinformatics/btad170
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- Publication type:
- Article
Using language models and ontology topology to perform semantic mapping of traits between biomedical datasets.
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- Bioinformatics, 2023, v. 39, n. 4, p. 1, doi. 10.1093/bioinformatics/btad169
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- Publication type:
- Article
Discriminative pattern discovery for the characterization of different network populations.
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- Bioinformatics, 2023, v. 39, n. 4, p. 1, doi. 10.1093/bioinformatics/btad168
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- Article
Modular response analysis reformulated as a multilinear regression problem.
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- Bioinformatics, 2023, v. 39, n. 4, p. 1, doi. 10.1093/bioinformatics/btad166
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- Publication type:
- Article
STGRNS: an interpretable transformer-based method for inferring gene regulatory networks from single-cell transcriptomic data.
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- Bioinformatics, 2023, v. 39, n. 4, p. 1, doi. 10.1093/bioinformatics/btad165
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- Article
mlf-core: a framework for deterministic machine learning.
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- Bioinformatics, 2023, v. 39, n. 4, p. 1, doi. 10.1093/bioinformatics/btad164
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- Publication type:
- Article
Con-AAE: contrastive cycle adversarial autoencoders for single-cell multi-omics alignment and integration.
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- Bioinformatics, 2023, v. 39, n. 4, p. 1, doi. 10.1093/bioinformatics/btad162
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- Publication type:
- Article
WAVES (Web-based tool for Analysis and Visualization of Environmental Samples)—a web application for visualization of wastewater pathogen sequencing results.
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- Bioinformatics, 2023, v. 39, n. 4, p. 1, doi. 10.1093/bioinformatics/btad160
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- Publication type:
- Article
Unmixing biological fluorescence image data with sparse and low-rank Poisson regression.
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- Bioinformatics, 2023, v. 39, n. 4, p. 1, doi. 10.1093/bioinformatics/btad159
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- Article
Boolean network sketches: a unifying framework for logical model inference.
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- Bioinformatics, 2023, v. 39, n. 4, p. 1, doi. 10.1093/bioinformatics/btad158
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- Publication type:
- Article
De novo drug design by iterative multiobjective deep reinforcement learning with graph-based molecular quality assessment.
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- Bioinformatics, 2023, v. 39, n. 4, p. 1, doi. 10.1093/bioinformatics/btad157
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- Publication type:
- Article
Integrative analysis of individual-level data and high-dimensional summary statistics.
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- Bioinformatics, 2023, v. 39, n. 4, p. 1, doi. 10.1093/bioinformatics/btad156
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- Article
HiCube: interactive visualization of multiscale and multimodal Hi-C and 3D genome data.
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- Bioinformatics, 2023, v. 39, n. 4, p. 1, doi. 10.1093/bioinformatics/btad154
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- Article
Foldcomp: a library and format for compressing and indexing large protein structure sets.
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- Bioinformatics, 2023, v. 39, n. 4, p. 1, doi. 10.1093/bioinformatics/btad153
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- Publication type:
- Article
DNAscan2: a versatile, scalable, and user-friendly analysis pipeline for human next-generation sequencing data.
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- Bioinformatics, 2023, v. 39, n. 4, p. 1, doi. 10.1093/bioinformatics/btad152
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- Article
AdaLiftOver: high-resolution identification of orthologous regulatory elements with Adaptive liftOver.
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- Bioinformatics, 2023, v. 39, n. 4, p. 1, doi. 10.1093/bioinformatics/btad149
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- Article
Flex Meta-Storms elucidates the microbiome local beta-diversity under specific phenotypes.
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- Bioinformatics, 2023, v. 39, n. 4, p. 1, doi. 10.1093/bioinformatics/btad148
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- Article
Correction to: Multi-omic integration by machine learning (MIMaL).
- Published in:
- 2023
- Publication type:
- Correction Notice
A high-performance deep-learning-based pipeline for whole-brain vasculature segmentation at the capillary resolution.
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- Bioinformatics, 2023, v. 39, n. 4, p. 1, doi. 10.1093/bioinformatics/btad145
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- Publication type:
- Article
Seqpac: a framework for sRNA-seq analysis in R using sequence-based counts.
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- Bioinformatics, 2023, v. 39, n. 4, p. 1, doi. 10.1093/bioinformatics/btad144
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- Article
Phenonaut: multiomics data integration for phenotypic space exploration.
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- Bioinformatics, 2023, v. 39, n. 4, p. 1, doi. 10.1093/bioinformatics/btad143
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- Publication type:
- Article
OutSingle: a novel method of detecting and injecting outliers in RNA-Seq count data using the optimal hard threshold for singular values.
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- Bioinformatics, 2023, v. 39, n. 4, p. 1, doi. 10.1093/bioinformatics/btad142
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- Article
dipwmsearch: a Python package for searching di-PWM motifs.
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- Bioinformatics, 2023, v. 39, n. 4, p. 1, doi. 10.1093/bioinformatics/btad141
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- Publication type:
- Article
IntestLine: a shiny-based application to map the rolled intestinal tissue onto a line.
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- Bioinformatics, 2023, v. 39, n. 4, p. 1, doi. 10.1093/bioinformatics/btad140
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- Publication type:
- Article
The hidden factor: accounting for covariate effects in power and sample size computation for a binary trait.
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- Bioinformatics, 2023, v. 39, n. 4, p. 1, doi. 10.1093/bioinformatics/btad139
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- Article
Effective and efficient active learning for deep learning-based tissue image analysis.
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- Bioinformatics, 2023, v. 39, n. 4, p. 1, doi. 10.1093/bioinformatics/btad138
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- Publication type:
- Article
scMCs: a framework for single-cell multi-omics data integration and multiple clusterings.
- Published in:
- Bioinformatics, 2023, v. 39, n. 4, p. 1, doi. 10.1093/bioinformatics/btad133
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- Publication type:
- Article
An expectation–maximization framework for comprehensive prediction of isoform-specific functions.
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- Bioinformatics, 2023, v. 39, n. 4, p. 1, doi. 10.1093/bioinformatics/btad132
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- Article
Prediction and curation of missing biomedical identifier mappings with Biomappings.
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- Bioinformatics, 2023, v. 39, n. 4, p. 1, doi. 10.1093/bioinformatics/btad130
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- Publication type:
- Article
RNAget: an API to securely retrieve RNA quantifications.
- Published in:
- Bioinformatics, 2023, v. 39, n. 4, p. 1, doi. 10.1093/bioinformatics/btad126
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- Publication type:
- Article
PreTP-2L: identification of therapeutic peptides and their types using two-layer ensemble learning framework.
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- Bioinformatics, 2023, v. 39, n. 4, p. 1, doi. 10.1093/bioinformatics/btad125
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- Publication type:
- Article
Interpretable meta-learning of multi-omics data for survival analysis and pathway enrichment.
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- Bioinformatics, 2023, v. 39, n. 4, p. 1, doi. 10.1093/bioinformatics/btad113
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- Publication type:
- Article
kb_DRAM: annotation and metabolic profiling of genomes with DRAM in KBase.
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- Bioinformatics, 2023, v. 39, n. 4, p. 1, doi. 10.1093/bioinformatics/btad110
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- Publication type:
- Article
DeepPheWAS: an R package for phenotype generation and association analysis for phenome-wide association studies.
- Published in:
- Bioinformatics, 2023, v. 39, n. 4, p. 1, doi. 10.1093/bioinformatics/btad073
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- Publication type:
- Article