Works matching IS 13674803 AND DT 2023 AND VI 39
Results: 754
Correction to: Snapper: high-sensitive detection of methylation motifs based on Oxford Nanopore reads.
- Published in:
- 2023
- Publication type:
- Correction Notice
Correction to: Prediction of gene co-expression from chromatin contacts with graph attention network.
- Published in:
- 2023
- Publication type:
- Correction Notice
CoSIA: an R Bioconductor package for CrOss Species Investigation and Analysis.
- Published in:
- Bioinformatics, 2023, v. 39, n. 12, p. 1, doi. 10.1093/bioinformatics/btad759
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- Publication type:
- Article
Correction to: KR4SL: knowledge graph reasoning for explainable prediction of synthetic lethality.
- Published in:
- 2023
- Publication type:
- Correction Notice
Correction to: NeoFox: annotating neoantigen candidates with neoantigen features.
- Published in:
- 2023
- Publication type:
- Correction Notice
Correction to: DeepFold: enhancing protein structure prediction through optimized loss functions, improved template features, and re-optimized energy function.
- Published in:
- 2023
- Publication type:
- Correction Notice
Scaling up single-cell RNA-seq data analysis with CellBridge workflow.
- Published in:
- Bioinformatics, 2023, v. 39, n. 12, p. 1, doi. 10.1093/bioinformatics/btad760
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- Publication type:
- Article
Assigning mutational signatures to individual samples and individual somatic mutations with SigProfilerAssignment.
- Published in:
- Bioinformatics, 2023, v. 39, n. 12, p. 1, doi. 10.1093/bioinformatics/btad756
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- Publication type:
- Article
ENTRAIN: integrating trajectory inference and gene regulatory networks with spatial data to co-localize the receptor–ligand interactions that specify cell fate.
- Published in:
- Bioinformatics, 2023, v. 39, n. 12, p. 1, doi. 10.1093/bioinformatics/btad765
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- Publication type:
- Article
GDmicro: classifying host disease status with GCN and deep adaptation network based on the human gut microbiome data.
- Published in:
- Bioinformatics, 2023, v. 39, n. 12, p. 1, doi. 10.1093/bioinformatics/btad747
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- Publication type:
- Article
Bibliometric analysis of neuroscience publications quantifies the impact of data sharing.
- Published in:
- Bioinformatics, 2023, v. 39, n. 12, p. 1, doi. 10.1093/bioinformatics/btad746
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- Publication type:
- Article
CytoCopasi: a chemical systems biology target and drug discovery visual data analytics platform.
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- Bioinformatics, 2023, v. 39, n. 12, p. 1, doi. 10.1093/bioinformatics/btad745
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- Publication type:
- Article
PDBImages: a command-line tool for automated macromolecular structure visualization.
- Published in:
- Bioinformatics, 2023, v. 39, n. 12, p. 1, doi. 10.1093/bioinformatics/btad744
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- Publication type:
- Article
Correction to: PEMT: a patent enrichment tool for drug discovery.
- Published in:
- 2023
- Publication type:
- Correction Notice
EPIC-TRACE: predicting TCR binding to unseen epitopes using attention and contextualized embeddings.
- Published in:
- Bioinformatics, 2023, v. 39, n. 12, p. 1, doi. 10.1093/bioinformatics/btad743
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- Publication type:
- Article
IntelliGenes: a novel machine learning pipeline for biomarker discovery and predictive analysis using multi-genomic profiles.
- Published in:
- Bioinformatics, 2023, v. 39, n. 12, p. 1, doi. 10.1093/bioinformatics/btad755
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- Publication type:
- Article
VSCode-Antimony: a source editor for building, analyzing, and translating antimony models.
- Published in:
- Bioinformatics, 2023, v. 39, n. 12, p. 1, doi. 10.1093/bioinformatics/btad753
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- Publication type:
- Article
LncLocFormer: a Transformer-based deep learning model for multi-label lncRNA subcellular localization prediction by using localization-specific attention mechanism.
- Published in:
- Bioinformatics, 2023, v. 39, n. 12, p. 1, doi. 10.1093/bioinformatics/btad752
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- Publication type:
- Article
Rarity: discovering rare cell populations from single-cell imaging data.
- Published in:
- Bioinformatics, 2023, v. 39, n. 12, p. 1, doi. 10.1093/bioinformatics/btad750
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- Publication type:
- Article
TADA: taxonomy-aware dataset aggregator.
- Published in:
- Bioinformatics, 2023, v. 39, n. 12, p. 1, doi. 10.1093/bioinformatics/btad742
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- Publication type:
- Article
FunctanSNP: an R package for functional analysis of dense SNP data (with interactions).
- Published in:
- Bioinformatics, 2023, v. 39, n. 12, p. 1, doi. 10.1093/bioinformatics/btad741
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- Publication type:
- Article
Local Disordered Region Sampling (LDRS) for ensemble modeling of proteins with experimentally undetermined or low confidence prediction segments.
- Published in:
- Bioinformatics, 2023, v. 39, n. 12, p. 1, doi. 10.1093/bioinformatics/btad739
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- Publication type:
- Article
MaxCLK: discovery of cancer driver genes via maximal clique and information entropy of modules.
- Published in:
- Bioinformatics, 2023, v. 39, n. 12, p. 1, doi. 10.1093/bioinformatics/btad737
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- Publication type:
- Article
MMCL-CDR: enhancing cancer drug response prediction with multi-omics and morphology images contrastive representation learning.
- Published in:
- Bioinformatics, 2023, v. 39, n. 12, p. 1, doi. 10.1093/bioinformatics/btad734
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- Publication type:
- Article
Parsley: a web app for parsing data from plate readers.
- Published in:
- Bioinformatics, 2023, v. 39, n. 12, p. 1, doi. 10.1093/bioinformatics/btad733
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- Publication type:
- Article
Correction to: GIL: a python package for designing custom indexing primers.
- Published in:
- 2023
- Publication type:
- Correction Notice
Protein intrinsically disordered regions have a non-random, modular architecture.
- Published in:
- Bioinformatics, 2023, v. 39, n. 12, p. 1, doi. 10.1093/bioinformatics/btad732
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- Publication type:
- Article
TsImpute: an accurate two-step imputation method for single-cell RNA-seq data.
- Published in:
- Bioinformatics, 2023, v. 39, n. 12, p. 1, doi. 10.1093/bioinformatics/btad731
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- Publication type:
- Article
Re-analysis and meta-analysis of summary statistics from gene–environment interaction studies.
- Published in:
- Bioinformatics, 2023, v. 39, n. 12, p. 1, doi. 10.1093/bioinformatics/btad730
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- Publication type:
- Article
Dupsifter: a lightweight duplicate marking tool for whole genome bisulfite sequencing.
- Published in:
- Bioinformatics, 2023, v. 39, n. 12, p. 1, doi. 10.1093/bioinformatics/btad729
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- Publication type:
- Article
Hostile: accurate decontamination of microbial host sequences.
- Published in:
- Bioinformatics, 2023, v. 39, n. 12, p. 1, doi. 10.1093/bioinformatics/btad728
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- Publication type:
- Article
LMdist: Local Manifold distance accurately measures beta diversity in ecological gradients.
- Published in:
- Bioinformatics, 2023, v. 39, n. 12, p. 1, doi. 10.1093/bioinformatics/btad727
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- Publication type:
- Article
invMap: a sensitive mapping tool for long noisy reads with inversion structural variants.
- Published in:
- Bioinformatics, 2023, v. 39, n. 12, p. 1, doi. 10.1093/bioinformatics/btad726
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- Publication type:
- Article
ROCCO: a robust method for detection of open chromatin via convex optimization.
- Published in:
- Bioinformatics, 2023, v. 39, n. 12, p. 1, doi. 10.1093/bioinformatics/btad725
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- Publication type:
- Article
ProteinMAE: masked autoencoder for protein surface self-supervised learning.
- Published in:
- Bioinformatics, 2023, v. 39, n. 12, p. 1, doi. 10.1093/bioinformatics/btad724
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- Publication type:
- Article
survex: an R package for explaining machine learning survival models.
- Published in:
- Bioinformatics, 2023, v. 39, n. 12, p. 1, doi. 10.1093/bioinformatics/btad723
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- Publication type:
- Article
Benchmarking and improving the performance of variant-calling pipelines with RecallME.
- Published in:
- Bioinformatics, 2023, v. 39, n. 12, p. 1, doi. 10.1093/bioinformatics/btad722
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- Publication type:
- Article
Hybkit: a Python API and command-line toolkit for hybrid sequence data from chimeric RNA methods.
- Published in:
- Bioinformatics, 2023, v. 39, n. 12, p. 1, doi. 10.1093/bioinformatics/btad721
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- Publication type:
- Article
OBMeta: a comprehensive web server to analyze and validate gut microbial features and biomarkers for obesity-associated metabolic diseases.
- Published in:
- Bioinformatics, 2023, v. 39, n. 12, p. 1, doi. 10.1093/bioinformatics/btad715
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- Publication type:
- Article
Hierarchical and automated cell-type annotation and inference of cancer cell of origin with Census.
- Published in:
- Bioinformatics, 2023, v. 39, n. 12, p. 1, doi. 10.1093/bioinformatics/btad714
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- Publication type:
- Article
NMJ Analyser: a novel method to quantify neuromuscular junction morphology in zebrafish.
- Published in:
- Bioinformatics, 2023, v. 39, n. 12, p. 1, doi. 10.1093/bioinformatics/btad720
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- Publication type:
- Article
DeepProSite: structure-aware protein binding site prediction using ESMFold and pretrained language model.
- Published in:
- Bioinformatics, 2023, v. 39, n. 12, p. 1, doi. 10.1093/bioinformatics/btad718
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- Publication type:
- Article
Term-BLAST-like alignment tool for concept recognition in noisy clinical texts.
- Published in:
- Bioinformatics, 2023, v. 39, n. 12, p. 1, doi. 10.1093/bioinformatics/btad716
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- Publication type:
- Article
ReConPlot: an R package for the visualization and interpretation of genomic rearrangements.
- Published in:
- Bioinformatics, 2023, v. 39, n. 12, p. 1, doi. 10.1093/bioinformatics/btad719
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- Publication type:
- Article
deepFPlearn<sup>+</sup>: enhancing toxicity prediction across the chemical universe using graph neural networks.
- Published in:
- Bioinformatics, 2023, v. 39, n. 12, p. 1, doi. 10.1093/bioinformatics/btad713
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- Publication type:
- Article
DeepFold: enhancing protein structure prediction through optimized loss functions, improved template features, and re-optimized energy function.
- Published in:
- Bioinformatics, 2023, v. 39, n. 12, p. 1, doi. 10.1093/bioinformatics/btad712
- By:
- Publication type:
- Article
Multimodal learning in clinical proteomics: enhancing antimicrobial resistance prediction models with chemical information.
- Published in:
- Bioinformatics, 2023, v. 39, n. 12, p. 1, doi. 10.1093/bioinformatics/btad717
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- Publication type:
- Article
CellWalker: a user-friendly and modular computational pipeline for morphological analysis of microscopy images.
- Published in:
- Bioinformatics, 2023, v. 39, n. 12, p. 1, doi. 10.1093/bioinformatics/btad710
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- Publication type:
- Article
Interpretable prediction models for widespread m6A RNA modification across cell lines and tissues.
- Published in:
- Bioinformatics, 2023, v. 39, n. 12, p. 1, doi. 10.1093/bioinformatics/btad709
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- Publication type:
- Article
COMMO: a web server for the identification and analysis of consensus gene modules across multiple methods.
- Published in:
- Bioinformatics, 2023, v. 39, n. 12, p. 1, doi. 10.1093/bioinformatics/btad708
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- Publication type:
- Article