Works matching IS 13674803 AND DT 2021 AND VI 37 AND IP 21
Results: 61
DEMETER: efficient simultaneous curation of genome-scale reconstructions guided by experimental data and refined gene annotations.
- Published in:
- Bioinformatics, 2021, v. 37, n. 21, p. 3974, doi. 10.1093/bioinformatics/btab622
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- Article
FRETraj: integrating single-molecule spectroscopy with molecular dynamics.
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- Bioinformatics, 2021, v. 37, n. 21, p. 3953, doi. 10.1093/bioinformatics/btab615
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- Article
BleTIES: annotation of natural genome editing in ciliates using long read sequencing.
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- Bioinformatics, 2021, v. 37, n. 21, p. 3929, doi. 10.1093/bioinformatics/btab613
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- Article
Sciviewer enables interactive visual interrogation of single-cell RNA-Seq data from the Python programming environment.
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- Bioinformatics, 2021, v. 37, n. 21, p. 3961, doi. 10.1093/bioinformatics/btab689
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- Article
ACES: Analysis of Conservation with an Extensive list of Species.
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- Bioinformatics, 2021, v. 37, n. 21, p. 3920, doi. 10.1093/bioinformatics/btab684
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- Article
IntelliPy: a GUI for analyzing IntelliCage data.
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- Bioinformatics, 2021, v. 37, n. 21, p. 3972, doi. 10.1093/bioinformatics/btab682
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- Article
RLM: fast and simplified extraction of read-level methylation metrics from bisulfite sequencing data.
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- Bioinformatics, 2021, v. 37, n. 21, p. 3934, doi. 10.1093/bioinformatics/btab663
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- Article
mspack: efficient lossless and lossy mass spectrometry data compression.
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- Bioinformatics, 2021, v. 37, n. 21, p. 3923, doi. 10.1093/bioinformatics/btab636
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- Article
utr.annotation: a tool for annotating genomic variants that could influence post-transcriptional regulation.
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- 2021
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- Publication type:
- Abstract
CellProfiler Analyst 3.0: accessible data exploration and machine learning for image analysis.
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- Bioinformatics, 2021, v. 37, n. 21, p. 3992, doi. 10.1093/bioinformatics/btab634
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- Article
Improved estimation of model quality using predicted inter-residue distance.
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- Bioinformatics, 2021, v. 37, n. 21, p. 3752, doi. 10.1093/bioinformatics/btab632
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- Article
Prowler: a novel trimming algorithm for Oxford Nanopore sequence data.
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- Bioinformatics, 2021, v. 37, n. 21, p. 3936, doi. 10.1093/bioinformatics/btab630
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- Article
pepsickle rapidly and accurately predicts proteasomal cleavage sites for improved neoantigen identification.
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- Bioinformatics, 2021, v. 37, n. 21, p. 3723, doi. 10.1093/bioinformatics/btab628
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- Publication type:
- Article
Differential transcript usage analysis of bulk and single-cell RNA-seq data with DTUrtle.
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- Bioinformatics, 2021, v. 37, n. 21, p. 3781, doi. 10.1093/bioinformatics/btab629
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- Article
FORUM: building a Knowledge Graph from public databases and scientific literature to extract associations between chemicals and diseases.
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- Bioinformatics, 2021, v. 37, n. 21, p. 3896, doi. 10.1093/bioinformatics/btab627
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- Article
fobitools framework: the first steps towards food enrichment analysis.
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- Bioinformatics, 2021, v. 37, n. 21, p. 3969, doi. 10.1093/bioinformatics/btab626
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- Article
Deep Subspace Mutual Learning for cancer subtypes prediction.
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- Bioinformatics, 2021, v. 37, n. 21, p. 3715, doi. 10.1093/bioinformatics/btab625
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- Article
Custom workflows to improve joint variant calling from multiple related tumour samples: FreeBayesSomatic and Strelka2Pass.
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- Bioinformatics, 2021, v. 37, n. 21, p. 3916, doi. 10.1093/bioinformatics/btab606
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- Article
OpenPhi: an interface to access Philips iSyntax whole slide images for computational pathology.
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- Bioinformatics, 2021, v. 37, n. 21, p. 3995, doi. 10.1093/bioinformatics/btab578
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- Article
Predicting correlated outcomes from molecular data.
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- Bioinformatics, 2021, v. 37, n. 21, p. 3889, doi. 10.1093/bioinformatics/btab576
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- Article
FlexTaxD: flexible modification of taxonomy databases for improved sequence classification.
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- Bioinformatics, 2021, v. 37, n. 21, p. 3932, doi. 10.1093/bioinformatics/btab621
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- Article
SAMPDI-3D: predicting the effects of protein and DNA mutations on protein–DNA interactions.
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- Bioinformatics, 2021, v. 37, n. 21, p. 3760, doi. 10.1093/bioinformatics/btab567
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- Publication type:
- Article
Maximization of non-idle enzymes improves the coverage of the estimated maximal in vivo enzyme catalytic rates in Escherichia coli.
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- Bioinformatics, 2021, v. 37, n. 21, p. 3848, doi. 10.1093/bioinformatics/btab575
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- Article
TCRpair: prediction of functional pairing between HLA-A*02:01-restricted T-cell receptor α and β chains.
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- Bioinformatics, 2021, v. 37, n. 21, p. 3938, doi. 10.1093/bioinformatics/btab573
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- Article
Sparse least trimmed squares regression with compositional covariates for high-dimensional data.
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- Bioinformatics, 2021, v. 37, n. 21, p. 3805, doi. 10.1093/bioinformatics/btab572
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- Publication type:
- Article
NetControl4BioMed: a web-based platform for controllability analysis of protein–protein interaction networks.
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- Bioinformatics, 2021, v. 37, n. 21, p. 3976, doi. 10.1093/bioinformatics/btab570
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- Article
Assessing heterogeneity in spatial data using the HTA index with applications to spatial transcriptomics and imaging.
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- Bioinformatics, 2021, v. 37, n. 21, p. 3796, doi. 10.1093/bioinformatics/btab569
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- Article
Detecting quantitative trait loci and exploring chromosomal pairing in autopolyploids using polyqtlR.
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- Bioinformatics, 2021, v. 37, n. 21, p. 3822, doi. 10.1093/bioinformatics/btab574
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- Article
Mediation analysis for survival data with high-dimensional mediators.
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- Bioinformatics, 2021, v. 37, n. 21, p. 3815, doi. 10.1093/bioinformatics/btab564
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- Article
LipiDisease: associate lipids to diseases using literature mining.
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- Bioinformatics, 2021, v. 37, n. 21, p. 3981, doi. 10.1093/bioinformatics/btab559
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- Article
MERIDA: a novel Boolean logic-based integer linear program for personalized cancer therapy.
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- Bioinformatics, 2021, v. 37, n. 21, p. 3881, doi. 10.1093/bioinformatics/btab546
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- Article
ClustENMD: efficient sampling of biomolecular conformational space at atomic resolution.
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- Bioinformatics, 2021, v. 37, n. 21, p. 3956, doi. 10.1093/bioinformatics/btab496
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- Article
PZLAST: an ultra-fast amino acid sequence similarity search server against public metagenomes.
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- Bioinformatics, 2021, v. 37, n. 21, p. 3944, doi. 10.1093/bioinformatics/btab492
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- Article
Increasing the accuracy of single sequence prediction methods using a deep semi-supervised learning framework.
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- Bioinformatics, 2021, v. 37, n. 21, p. 3744, doi. 10.1093/bioinformatics/btab491
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- Article
Medical concept normalization in clinical trials with drug and disease representation learning.
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- Bioinformatics, 2021, v. 37, n. 21, p. 3856, doi. 10.1093/bioinformatics/btab474
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- Article
JBrowseR: an R interface to the JBrowse 2 genome browser.
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- Bioinformatics, 2021, v. 37, n. 21, p. 3914, doi. 10.1093/bioinformatics/btab459
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- Publication type:
- Article
MNHN-Tree-Tools: a toolbox for tree inference using multi-scale clustering of a set of sequences.
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- Bioinformatics, 2021, v. 37, n. 21, p. 3947, doi. 10.1093/bioinformatics/btab430
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- Article
wQFM: highly accurate genome-scale species tree estimation from weighted quartets.
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- Bioinformatics, 2021, v. 37, n. 21, p. 3734, doi. 10.1093/bioinformatics/btab428
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- Article
Tysserand—fast and accurate reconstruction of spatial networks from bioimages.
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- Bioinformatics, 2021, v. 37, n. 21, p. 3989, doi. 10.1093/bioinformatics/btab490
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- Article
MHCVision: estimation of global and local false discovery rate for MHC class I peptide binding prediction.
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- Bioinformatics, 2021, v. 37, n. 21, p. 3830, doi. 10.1093/bioinformatics/btab479
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- Publication type:
- Article
CStreet: a computed Cell State trajectory inference method for time-series single-cell RNA sequencing data.
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- Bioinformatics, 2021, v. 37, n. 21, p. 3774, doi. 10.1093/bioinformatics/btab488
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- Article
Linear functional organization of the omic embedding space.
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- Bioinformatics, 2021, v. 37, n. 21, p. 3839, doi. 10.1093/bioinformatics/btab487
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- Article
Non-parametric modelling of temporal and spatial counts data from RNA-seq experiments.
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- Bioinformatics, 2021, v. 37, n. 21, p. 3788, doi. 10.1093/bioinformatics/btab486
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- Publication type:
- Article
phyLoSTM: a novel deep learning model on disease prediction from longitudinal microbiome data.
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- Bioinformatics, 2021, v. 37, n. 21, p. 3707, doi. 10.1093/bioinformatics/btab482
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- Article
TIGA: target illumination GWAS analytics.
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- Bioinformatics, 2021, v. 37, n. 21, p. 3865, doi. 10.1093/bioinformatics/btab427
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- Publication type:
- Article
E-Pedigrees: a large-scale automatic family pedigree prediction application.
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- Bioinformatics, 2021, v. 37, n. 21, p. 3966, doi. 10.1093/bioinformatics/btab419
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- Article
Structural discrimination analysis for constraint selection in protein modeling.
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- Bioinformatics, 2021, v. 37, n. 21, p. 3766, doi. 10.1093/bioinformatics/btab425
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- Article
PDBe aggregated API: programmatic access to an integrative knowledge graph of molecular structure data.
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- Bioinformatics, 2021, v. 37, n. 21, p. 3950, doi. 10.1093/bioinformatics/btab424
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- Publication type:
- Article
SARS-CoV-2 sequence submission tool for the European Nucleotide Archive.
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- Bioinformatics, 2021, v. 37, n. 21, p. 3983, doi. 10.1093/bioinformatics/btab421
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- Publication type:
- Article
HGC: fast hierarchical clustering for large-scale single-cell data.
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- Bioinformatics, 2021, v. 37, n. 21, p. 3964, doi. 10.1093/bioinformatics/btab420
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- Publication type:
- Article