Works matching IS 13674803 AND DT 2021 AND VI 37 AND IP 2

Results: 26

Erratum to: EpiGraphDB: a database and data mining platform for health data science.

Published in:

Bioinformatics, 2021, v. 37, n. 2, p. 288, doi. 10.1093/bioinformatics/btab104

By:

Liu, Yi;
Elsworth, Benjamin;
Erola, Pau;
Haberland, Valeriia;
Hemani, Gibran;
Lyon, Matt;
Zheng, Jie;
Lloyd, Oliver;
Vabistsevits, Marina;
Gaunt, Tom R

Publication type:

Article

iCarPS: a computational tool for identifying protein carbonylation sites by novel encoded features.

Published in:

Bioinformatics, 2021, v. 37, n. 2, p. 171, doi. 10.1093/bioinformatics/btaa702

By:

Zhang, Dan;
Xu, Zhao-Chun;
Su, Wei;
Yang, Yu-He;
Lv, Hao;
Yang, Hui;
Lin, Hao

Publication type:

Article

Unsupervised protein embeddings outperform hand-crafted sequence and structure features at predicting molecular function.

Published in:

Bioinformatics, 2021, v. 37, n. 2, p. 162, doi. 10.1093/bioinformatics/btaa701

By:

Villegas-Morcillo, Amelia;
Makrodimitris, Stavros;
Ham, Roeland C H J van;
Gomez, Angel M;
Sanchez, Victoria;
Reinders, Marcel J T

Publication type:

Article

CRAFT: Compact genome Representation toward large-scale Alignment-Free daTabase.

Published in:

Bioinformatics, 2021, v. 37, n. 2, p. 155, doi. 10.1093/bioinformatics/btaa699

By:

Lu, Yang Young;
Bai, Jiaxing;
Wang, Yiwen;
Wang, Ying;
Sun, Fengzhu

Publication type:

Article

Evaluating recommender systems for AI-driven biomedical informatics.

Published in:

Bioinformatics, 2021, v. 37, n. 2, p. 250, doi. 10.1093/bioinformatics/btaa698

By:

Cava, William La;
Williams, Heather;
Fu, Weixuan;
Vitale, Steve;
Srivatsan, Durga;
Moore, Jason H

Publication type:

Article

Uncovering antibody cross-reaction dynamics in influenza A infections.

Published in:

Bioinformatics, 2021, v. 37, n. 2, p. 229, doi. 10.1093/bioinformatics/btaa691

By:

Hernandez-Mejia, Gustavo;
Hernandez-Vargas, Esteban A

Publication type:

Article

Co-phosphorylation networks reveal subtype-specific signaling modules in breast cancer.

Published in:

Bioinformatics, 2021, v. 37, n. 2, p. 221, doi. 10.1093/bioinformatics/btaa678

By:

Ayati, Marzieh;
Chance, Mark R;
Koyutürk, Mehmet

Publication type:

Article

The Russian Drug Reaction Corpus and neural models for drug reactions and effectiveness detection in user reviews.

Published in:

Bioinformatics, 2021, v. 37, n. 2, p. 243, doi. 10.1093/bioinformatics/btaa675

By:

Tutubalina, Elena;
Alimova, Ilseyar;
Miftahutdinov, Zulfat;
Sakhovskiy, Andrey;
Malykh, Valentin;
Nikolenko, Sergey

Publication type:

Article

Large-scale entity representation learning for biomedical relationship extraction.

Published in:

Bioinformatics, 2021, v. 37, n. 2, p. 236, doi. 10.1093/bioinformatics/btaa674

By:

Sänger, Mario;
Leser, Ulf

Publication type:

Article

Discovering a sparse set of pairwise discriminating features in high-dimensional data.

Published in:

Bioinformatics, 2021, v. 37, n. 2, p. 202, doi. 10.1093/bioinformatics/btaa690

By:

Melton, Samuel;
Ramanathan, Sharad

Publication type:

Article

Dream: powerful differential expression analysis for repeated measures designs.

Published in:

Bioinformatics, 2021, v. 37, n. 2, p. 192, doi. 10.1093/bioinformatics/btaa687

By:

Hoffman, Gabriel E;
Roussos, Panos

Publication type:

Article

Scalable machine learning-assisted model exploration and inference using Sciope.

Published in:

Bioinformatics, 2021, v. 37, n. 2, p. 279, doi. 10.1093/bioinformatics/btaa673

By:

Singh, Prashant;
Wrede, Fredrik;
Hellander, Andreas

Publication type:

Article

UglyTrees: a browser-based multispecies coalescent tree visualizer.

Published in:

Bioinformatics, 2021, v. 37, n. 2, p. 268, doi. 10.1093/bioinformatics/btaa679

By:

Douglas, Jordan

Publication type:

Article

A statistical approach for tracking clonal dynamics in cancer using longitudinal next-generation sequencing data.

Published in:

Bioinformatics, 2021, v. 37, n. 2, p. 147, doi. 10.1093/bioinformatics/btaa672

By:

Vavoulis, Dimitrios V;
Cutts, Anthony;
Taylor, Jenny C;
Schuh, Anna

Publication type:

Article

Deuteros 2.0: peptide-level significance testing of data from hydrogen deuterium exchange mass spectrometry.

Published in:

Bioinformatics, 2021, v. 37, n. 2, p. 270, doi. 10.1093/bioinformatics/btaa677

By:

Lau, Andy M;
Claesen, Jürgen;
Hansen, Kjetil;
Politis, Argyris

Publication type:

Article

Triplet-based similarity score for fully multilabeled trees with poly-occurring labels.

Published in:

Bioinformatics, 2021, v. 37, n. 2, p. 178, doi. 10.1093/bioinformatics/btaa676

By:

Ciccolella, Simone;
Bernardini, Giulia;
Denti, Luca;
Bonizzoni, Paola;
Previtali, Marco;
Vedova, Gianluca Della

Publication type:

Article

Few shot domain adaptation for in situ macromolecule structural classification in cryoelectron tomograms.

Published in:

Bioinformatics, 2021, v. 37, n. 2, p. 185, doi. 10.1093/bioinformatics/btaa671

By:

Yu, Liangyong;
Li, Ran;
Zeng, Xiangrui;
Wang, Hongyi;
Jin, Jie;
Ge, Yang;
Jiang, Rui;
Xu, Min

Publication type:

Article

treeheatr: an R package for interpretable decision tree visualizations.

Published in:

Bioinformatics, 2021, v. 37, n. 2, p. 282, doi. 10.1093/bioinformatics/btaa662

By:

Le, Trang T;
Moore, Jason H

Publication type:

Article

Interactive gene networks with KNIT.

Published in:

Bioinformatics, 2021, v. 37, n. 2, p. 276, doi. 10.1093/bioinformatics/btaa1107

By:

Magruder, D S;
Liebhoff, A M;
Bethune, J;
Bonn, S

Publication type:

Article

CellTracker: an automated toolbox for single-cell segmentation and tracking of time-lapse microscopy images.

Published in:

Bioinformatics, 2021, v. 37, n. 2, p. 285, doi. 10.1093/bioinformatics/btaa1106

By:

Hu, Tao;
Xu, Shixiong;
Wei, Lei;
Zhang, Xuegong;
Wang, Xiaowo

Publication type:

Article

Network approach to mutagenesis sheds insight on phage resistance in mycobacteria.

Published in:

Bioinformatics, 2021, v. 37, n. 2, p. 213, doi. 10.1093/bioinformatics/btaa1103

By:

Sinha, Saptarshi;
Samaddar, Sourabh;
Gupta, Sujoy K Das;
Roy, Soumen

Publication type:

Article

BamSnap: a lightweight viewer for sequencing reads in BAM files.

Published in:

Bioinformatics, 2021, v. 37, n. 2, p. 263, doi. 10.1093/bioinformatics/btaa1101

By:

Kwon, Minseok;
Lee, Soohyun;
Berselli, Michele;
Chu, Chong;
Park, Peter J

Publication type:

Article

TSPTFBS: a Docker image for trans-species prediction of transcription factor binding sites in plants.

Published in:

Bioinformatics, 2021, v. 37, n. 2, p. 260, doi. 10.1093/bioinformatics/btaa1100

By:

Liu, Lifen;
Zhang, Ge;
He, Shoupeng;
Hu, Xuehai

Publication type:

Article

Diamond: a multi-modal DIA mass spectrometry data processing pipeline.

Published in:

Bioinformatics, 2021, v. 37, n. 2, p. 265, doi. 10.1093/bioinformatics/btaa1093

By:

Li, Chenxin;
Gao, Mingxuan;
Yang, Wenxian;
Zhong, Chuanqi;
Yu, Rongshan

Publication type:

Article

shinyÉPICo: a graphical pipeline to analyze Illumina DNA methylation arrays.

Published in:

Bioinformatics, 2021, v. 37, n. 2, p. 257, doi. 10.1093/bioinformatics/btaa1095

By:

Morante-Palacios, Octavio;
Ballestar, Esteban

Publication type:

Article

ProteomeExpert: a Docker image-based web server for exploring, modeling, visualizing and mining quantitative proteomic datasets.

Published in:

Bioinformatics, 2021, v. 37, n. 2, p. 273, doi. 10.1093/bioinformatics/btaa1088

By:

Zhu, Tiansheng;
Chen, Hao;
Yan, Xishan;
Wu, Zhicheng;
Zhou, Xiaoxu;
Xiao, Qi;
Ge, Weigang;
Zhang, Qiushi;
Xu, Chao;
Xu, Luang;
Ruan, Guan;
Xue, Zhangzhi;
Yuan, Chunhui;
Chen, Guo-Bo;
Guo, Tiannan

Publication type:

Article