Works matching IS 13674803 AND DT 2020 AND VI 36 AND IP 6
Results: 64
Discovery of disease- and drug-specific pathways through community structures of a literature network.
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- Bioinformatics, 2020, v. 36, n. 6, p. 1881, doi. 10.1093/bioinformatics/btz857
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SPDI: data model for variants and applications at NCBI.
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- Bioinformatics, 2020, v. 36, n. 6, p. 1902, doi. 10.1093/bioinformatics/btz856
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Improved linking of motifs to their TFs using domain information.
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- Bioinformatics, 2020, v. 36, n. 6, p. 1655, doi. 10.1093/bioinformatics/btz855
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GTDB-Tk: a toolkit to classify genomes with the Genome Taxonomy Database.
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- Bioinformatics, 2020, v. 36, n. 6, p. 1925, doi. 10.1093/bioinformatics/btz848
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- Article
Differentiating isoform functions with collaborative matrix factorization.
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- Bioinformatics, 2020, v. 36, n. 6, p. 1864, doi. 10.1093/bioinformatics/btz847
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Mining single-cell time-series datasets with Time Course Inspector.
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- Bioinformatics, 2020, v. 36, n. 6, p. 1968, doi. 10.1093/bioinformatics/btz846
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Cross-lingual semantic annotation of biomedical literature: experiments in Spanish and English.
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- Bioinformatics, 2020, v. 36, n. 6, p. 1872, doi. 10.1093/bioinformatics/btz853
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RaNA-Seq: interactive RNA-Seq analysis from FASTQ files to functional analysis.
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- Bioinformatics, 2020, v. 36, n. 6, p. 1955, doi. 10.1093/bioinformatics/btz854
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Priors for genotyping polyploids.
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- Bioinformatics, 2020, v. 36, n. 6, p. 1795, doi. 10.1093/bioinformatics/btz852
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DigestiFlow: from BCL to FASTQ with ease.
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- Bioinformatics, 2020, v. 36, n. 6, p. 1983, doi. 10.1093/bioinformatics/btz850
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- Article
Somatic selection distinguishes oncogenes and tumor suppressor genes.
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- Bioinformatics, 2020, v. 36, n. 6, p. 1712, doi. 10.1093/bioinformatics/btz851
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MILES: a Java tool to extract node-specific enriched subgraphs in biomolecular networks.
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- Bioinformatics, 2020, v. 36, n. 6, p. 1978, doi. 10.1093/bioinformatics/btz849
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- Article
Benchmarking immunoinformatic tools for the analysis of antibody repertoire sequences.
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- Bioinformatics, 2020, v. 36, n. 6, p. 1731, doi. 10.1093/bioinformatics/btz845
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- Article
Learning complex subcellular distribution patterns of proteins via analysis of immunohistochemistry images.
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- Bioinformatics, 2020, v. 36, n. 6, p. 1908, doi. 10.1093/bioinformatics/btz844
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- Article
An integrative approach for fine-mapping chromatin interactions.
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- Bioinformatics, 2020, v. 36, n. 6, p. 1704, doi. 10.1093/bioinformatics/btz843
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- Article
NCutYX: a package for clustering analysis of multilayer omics data.
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- Bioinformatics, 2020, v. 36, n. 6, p. 1976, doi. 10.1093/bioinformatics/btz842
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- Article
HypercubeME: two hundred million combinatorially complete datasets from a single experiment.
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- Bioinformatics, 2020, v. 36, n. 6, p. 1960, doi. 10.1093/bioinformatics/btz841
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- Article
Diversity of rhodopsins in cultivated bacteria of the family Geodermatophilaceae associated with non-aquatic environments.
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- Bioinformatics, 2020, v. 36, n. 6, p. 1668, doi. 10.1093/bioinformatics/btz840
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Estimation of eosinophil cells in cord blood with references based on blood in adults via Bayesian measurement error modeling.
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- Bioinformatics, 2020, v. 36, n. 6, p. 1923, doi. 10.1093/bioinformatics/btz839
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Estimating chain length for time delays in dynamical systems using profile likelihood.
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- Bioinformatics, 2020, v. 36, n. 6, p. 1848, doi. 10.1093/bioinformatics/btz838
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- Article
Differential privacy under dependent tuples—the case of genomic privacy.
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- Bioinformatics, 2020, v. 36, n. 6, p. 1696, doi. 10.1093/bioinformatics/btz837
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- Article
DiNGO: standalone application for Gene Ontology and Human Phenotype Ontology term enrichment analysis.
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- Bioinformatics, 2020, v. 36, n. 6, p. 1981, doi. 10.1093/bioinformatics/btz836
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The Cytoscape BioGateway App: explorative network building from an RDF store.
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- Bioinformatics, 2020, v. 36, n. 6, p. 1966, doi. 10.1093/bioinformatics/btz835
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DiscoRhythm: an easy-to-use web application and R package for discovering rhythmicity.
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- Bioinformatics, 2020, v. 36, n. 6, p. 1952, doi. 10.1093/bioinformatics/btz834
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- Article
EpiDISH web server: Epigenetic Dissection of Intra-Sample-Heterogeneity with online GUI.
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- Bioinformatics, 2020, v. 36, n. 6, p. 1950, doi. 10.1093/bioinformatics/btz833
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On the inconsistent treatment of gene-protein-reaction rules in context-specific metabolic models.
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- Bioinformatics, 2020, v. 36, n. 6, p. 1986, doi. 10.1093/bioinformatics/btz832
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- Article
BAGSE: a Bayesian hierarchical model approach for gene set enrichment analysis.
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- Bioinformatics, 2020, v. 36, n. 6, p. 1689, doi. 10.1093/bioinformatics/btz831
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scGEAToolbox: a Matlab toolbox for single-cell RNA sequencing data analysis.
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- Bioinformatics, 2020, v. 36, n. 6, p. 1948, doi. 10.1093/bioinformatics/btz830
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- Article
ProAffiMuSeq: sequence-based method to predict the binding free energy change of protein–protein complexes upon mutation using functional classification.
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- Bioinformatics, 2020, v. 36, n. 6, p. 1725, doi. 10.1093/bioinformatics/btz829
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- Article
QMEANDisCo—distance constraints applied on model quality estimation.
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- Bioinformatics, 2020, v. 36, n. 6, p. 1765, doi. 10.1093/bioinformatics/btz828
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- Article
SigHotSpotter: scRNA-seq-based computational tool to control cell subpopulation phenotypes for cellular rejuvenation strategies.
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- Bioinformatics, 2020, v. 36, n. 6, p. 1963, doi. 10.1093/bioinformatics/btz827
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- Article
MDiNE: a model to estimate differential co-occurrence networks in microbiome studies.
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- Bioinformatics, 2020, v. 36, n. 6, p. 1840, doi. 10.1093/bioinformatics/btz824
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Multi-kernel linear mixed model with adaptive lasso for prediction analysis on high-dimensional multi-omics data.
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- Bioinformatics, 2020, v. 36, n. 6, p. 1785, doi. 10.1093/bioinformatics/btz822
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- Article
The evolution of contact prediction: evidence that contact selection in statistical contact prediction is changing.
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- Bioinformatics, 2020, v. 36, n. 6, p. 1750, doi. 10.1093/bioinformatics/btz816
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PRODIGY: personalized prioritization of driver genes.
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- Bioinformatics, 2020, v. 36, n. 6, p. 1831, doi. 10.1093/bioinformatics/btz815
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- Article
Influenza classification from short reads with VAPOR facilitates robust mapping pipelines and zoonotic strain detection for routine surveillance applications.
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- Bioinformatics, 2020, v. 36, n. 6, p. 1681, doi. 10.1093/bioinformatics/btz814
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- Article
Improved dropClust R package with integrative analysis support for scRNA-seq data.
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- Bioinformatics, 2020, v. 36, n. 6, p. 1946, doi. 10.1093/bioinformatics/btz823
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Enzyme annotation in UniProtKB using Rhea.
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- Bioinformatics, 2020, v. 36, n. 6, p. 1896, doi. 10.1093/bioinformatics/btz817
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- Article
WPMIAS: Whole-degradome-based Plant MicroRNA–target Interaction Analysis Server.
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- Bioinformatics, 2020, v. 36, n. 6, p. 1937, doi. 10.1093/bioinformatics/btz820
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- Article
RNASeq_similarity_matrix: visually identify sample mix-ups in RNASeq data using a 'genomic' sequence similarity matrix.
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- Bioinformatics, 2020, v. 36, n. 6, p. 1940, doi. 10.1093/bioinformatics/btz821
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Generalized Born radii computation using linear models and neural networks.
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- Bioinformatics, 2020, v. 36, n. 6, p. 1757, doi. 10.1093/bioinformatics/btz818
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- Article
DrawGlycan-SNFG and gpAnnotate: rendering glycans and annotating glycopeptide mass spectra.
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- Bioinformatics, 2020, v. 36, n. 6, p. 1942, doi. 10.1093/bioinformatics/btz819
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- Article
Taxonomic weighting improves the accuracy of a gap-filling algorithm for metabolic models.
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- Bioinformatics, 2020, v. 36, n. 6, p. 1823, doi. 10.1093/bioinformatics/btz813
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- Article
YY1 is a cis-regulator in the organoid models of high mammographic density.
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- Bioinformatics, 2020, v. 36, n. 6, p. 1663, doi. 10.1093/bioinformatics/btz812
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CASPR, an analysis pipeline for single and paired guide RNA CRISPR screens, reveals optimal target selection for long non-coding RNAs.
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- Bioinformatics, 2020, v. 36, n. 6, p. 1673, doi. 10.1093/bioinformatics/btz811
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- Article
OLOGRAM: determining significance of total overlap length between genomic regions sets.
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- Bioinformatics, 2020, v. 36, n. 6, p. 1920, doi. 10.1093/bioinformatics/btz810
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- Article
Network-based multi-task learning models for biomarker selection and cancer outcome prediction.
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- Bioinformatics, 2020, v. 36, n. 6, p. 1814, doi. 10.1093/bioinformatics/btz809
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HiCBricks: building blocks for efficient handling of large Hi-C datasets.
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- Bioinformatics, 2020, v. 36, n. 6, p. 1917, doi. 10.1093/bioinformatics/btz808
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GenCLiP 3: mining human genes' functions and regulatory networks from PubMed based on co-occurrences and natural language processing.
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- Bioinformatics, 2020, v. 36, n. 6, p. 1973, doi. 10.1093/bioinformatics/btz807
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Jasmine: a Java pipeline for isomiR characterization in miRNA-Seq data.
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- Bioinformatics, 2020, v. 36, n. 6, p. 1933, doi. 10.1093/bioinformatics/btz806
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