Works matching IS 13674803 AND DT 2020 AND VI 36 AND IP 17

Results: 24

BioModels Parameters: a treasure trove of parameter values from published systems biology models.

Published in:

Bioinformatics, 2020, v. 36, n. 17, p. 4649, doi. 10.1093/bioinformatics/btaa560

By:

Glont, Mihai;
Arankalle, Chinmay;
Tiwari, Krishna;
Nguyen, Tung V N;
Hermjakob, Henning;
Malik-Sheriff, Rahuman S

Publication type:

Article

Tropical principal component analysis on the space of phylogenetic trees.

Published in:

Bioinformatics, 2020, v. 36, n. 17, p. 4590, doi. 10.1093/bioinformatics/btaa564

By:

Page, Robert;
Yoshida, Ruriko;
Zhang, Leon

Publication type:

Article

Screening novel drug candidates for Alzheimer's disease by an integrated network and transcriptome analysis.

Published in:

Bioinformatics, 2020, v. 36, n. 17, p. 4626, doi. 10.1093/bioinformatics/btaa563

By:

Peng, Yonglin;
Yuan, Meng;
Xin, Juncai;
Liu, Xinhua;
Wang, Ju

Publication type:

Article

iBioProVis: interactive visualization and analysis of compound bioactivity space.

Published in:

Bioinformatics, 2020, v. 36, n. 17, p. 4674, doi. 10.1093/bioinformatics/btaa666

By:

Donmez, Ataberk;
Rifaioglu, Ahmet Sureyya;
Acar, Aybar;
Doğan, Tunca;
Cetin-Atalay, Rengul;
Atalay, Volkan

Publication type:

Article

BeadNet: deep learning-based bead detection and counting in low-resolution microscopy images.

Published in:

Bioinformatics, 2020, v. 36, n. 17, p. 4668, doi. 10.1093/bioinformatics/btaa594

By:

Scherr, Tim;
Streule, Karolin;
Bartschat, Andreas;
Böhland, Moritz;
Stegmaier, Johannes;
Reischl, Markus;
Orian-Rousseau, Véronique;
Mikut, Ralf

Publication type:

Article

HAPPI GWAS: Holistic Analysis with Pre- and Post-Integration GWAS.

Published in:

Bioinformatics, 2020, v. 36, n. 17, p. 4655, doi. 10.1093/bioinformatics/btaa589

By:

Slaten, Marianne L;
Chan, Yen On;
Shrestha, Vivek;
Lipka, Alexander E;
Angelovici, Ruthie

Publication type:

Article

A Blind and Independent Benchmark Study for Detecting Differentially Methylated Regions in Plants.

Published in:

Bioinformatics, 2020, v. 36, n. 17, p. 4673, doi. 10.1093/bioinformatics/btaa665

By:

Kreutz, Clemens;
Can, Nilay S;
Bruening, Ralf Schulze;
Meyberg, Rabea;
Mérai, Zsuzsanna;
Fernandez-Pozo, Noe;
Rensing, Stefan A

Publication type:

Article

Molywood: streamlining the design and rendering of molecular movies.

Published in:

Bioinformatics, 2020, v. 36, n. 17, p. 4660, doi. 10.1093/bioinformatics/btaa584

By:

Wieczór, Miłosz;
Hospital, Adam;
Bayarri, Genis;
Czub, Jacek;
Orozco, Modesto

Publication type:

Article

The Epigenetic Pacemaker: modeling epigenetic states under an evolutionary framework.

Published in:

Bioinformatics, 2020, v. 36, n. 17, p. 4662, doi. 10.1093/bioinformatics/btaa585

By:

Farrell, Colin;
Snir, Sagi;
Pellegrini, Matteo

Publication type:

Article

Very Fast Tree: speeding up the estimation of phylogenies for large alignments through parallelization and vectorization strategies.

Published in:

Bioinformatics, 2020, v. 36, n. 17, p. 4658, doi. 10.1093/bioinformatics/btaa582

By:

Piñeiro, César;
Abuín, José M;
Pichel, Juan C

Publication type:

Article

Benchmark of software tools for prokaryotic chromosomal interaction domain identification.

Published in:

Bioinformatics, 2020, v. 36, n. 17, p. 4560, doi. 10.1093/bioinformatics/btaa555

By:

Magnitov, Mikhail D;
Kuznetsova, Veronika S;
Ulianov, Sergey V;
Razin, Sergey V;
Tyakht, Alexander V

Publication type:

Article

HECNet: a hierarchical approach to enzyme function classification using a Siamese Triplet Network.

Published in:

Bioinformatics, 2020, v. 36, n. 17, p. 4583, doi. 10.1093/bioinformatics/btaa536

By:

Memon, Safyan Aman;
Khan, Kinaan Aamir;
Naveed, Hammad

Publication type:

Article

TaxoNN: ensemble of neural networks on stratified microbiome data for disease prediction.

Published in:

Bioinformatics, 2020, v. 36, n. 17, p. 4544, doi. 10.1093/bioinformatics/btaa542

By:

Sharma, Divya;
Paterson, Andrew D;
Xu, Wei

Publication type:

Article

LuxUS: DNA methylation analysis using generalized linear mixed model with spatial correlation.

Published in:

Bioinformatics, 2020, v. 36, n. 17, p. 4535, doi. 10.1093/bioinformatics/btaa539

By:

Halla-aho, Viivi;
Lähdesmäki, Harri

Publication type:

Article

DeepCDA: deep cross-domain compound–protein affinity prediction through LSTM and convolutional neural networks.

Published in:

Bioinformatics, 2020, v. 36, n. 17, p. 4633, doi. 10.1093/bioinformatics/btaa544

By:

Abbasi, Karim;
Razzaghi, Parvin;
Poso, Antti;
Amanlou, Massoud;
Ghasemi, Jahan B;
Masoudi-Nejad, Ali

Publication type:

Article

ScaleQC: a scalable lossy to lossless solution for NGS data compression.

Published in:

Bioinformatics, 2020, v. 36, n. 17, p. 4551, doi. 10.1093/bioinformatics/btaa543

By:

Yu, Rongshan;
Yang, Wenxian

Publication type:

Article

Accurate prediction of genome-wide RNA secondary structure profile based on extreme gradient boosting.

Published in:

Bioinformatics, 2020, v. 36, n. 17, p. 4576, doi. 10.1093/bioinformatics/btaa534

By:

Ke, Yaobin;
Rao, Jiahua;
Zhao, Huiying;
Lu, Yutong;
Xiao, Nong;
Yang, Yuedong

Publication type:

Article

SAINT: self-attention augmented inception-inside-inception network improves protein secondary structure prediction.

Published in:

Bioinformatics, 2020, v. 36, n. 17, p. 4599, doi. 10.1093/bioinformatics/btaa531

By:

Uddin, Mostofa Rafid;
Mahbub, Sazan;
Rahman, M Saifur;
Bayzid, Md Shamsuzzoha

Publication type:

Article

Integrating multi-OMICS data through sparse canonical correlation analysis for the prediction of complex traits: a comparison study.

Published in:

Bioinformatics, 2020, v. 36, n. 17, p. 4616, doi. 10.1093/bioinformatics/btaa530

By:

Rodosthenous, Theodoulos;
Shahrezaei, Vahid;
Evangelou, Marina

Publication type:

Article

SVJedi: genotyping structural variations with long reads.

Published in:

Bioinformatics, 2020, v. 36, n. 17, p. 4568, doi. 10.1093/bioinformatics/btaa527

By:

Lecompte, Lolita;
Peterlongo, Pierre;
Lavenier, Dominique;
Lemaitre, Claire

Publication type:

Article

Reference bias in the Illumina Isaac aligner.

Published in:

Bioinformatics, 2020, v. 36, n. 17, p. 4671, doi. 10.1093/bioinformatics/btaa514

By:

Cornish, Alex J;
Chubb, Daniel;
Frangou, Anna;
Hoang, Phuc H;
Kaiser, Martin;
Wedge, David C;
Houlston, Richard S

Publication type:

Article

UniRule: a unified rule resource for automatic annotation in the UniProt Knowledgebase.

Published in:

Bioinformatics, 2020, v. 36, n. 17, p. 4643, doi. 10.1093/bioinformatics/btaa485

By:

MacDougall, Alistair;
Volynkin, Vladimir;
Saidi, Rabie;
Poggioli, Diego;
Zellner, Hermann;
Hatton-Ellis, Emma;
Joshi, Vishal;
O'Donovan, Claire;
Orchard, Sandra;
Auchincloss, Andrea H;
Baratin, Delphine;
Bolleman, Jerven;
Coudert, Elisabeth;
Castro, Edouard de;
Hulo, Chantal;
Masson, Patrick;
Pedruzzi, Ivo;
Rivoire, Catherine;
Arighi, Cecilia;
Wang, Qinghua

Publication type:

Article

Spathial: an R package for the evolutionary analysis of biological data.

Published in:

Bioinformatics, 2020, v. 36, n. 17, p. 4664, doi. 10.1093/bioinformatics/btaa273

By:

Gardini, Erika;
Giorgi, Federico M;
Decherchi, Sergio;
Cavalli, Andrea

Publication type:

Article

LeafCutterMD: an algorithm for outlier splicing detection in rare diseases.

Published in:

Bioinformatics, 2020, v. 36, n. 17, p. 4609, doi. 10.1093/bioinformatics/btaa259

By:

Jenkinson, Garrett;
Li, Yang I;
Basu, Shubham;
Cousin, Margot A;
Oliver, Gavin R;
Klee, Eric W

Publication type:

Article