Works matching IS 13674803 AND DT 2019 AND VI 35 AND IP 18
Results: 58
Protein model quality assessment using 3D oriented convolutional neural networks.
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- Bioinformatics, 2019, v. 35, n. 18, p. 3313, doi. 10.1093/bioinformatics/btz122
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- Article
Using local alignment to enhance single-cell bisulfite sequencing data efficiency.
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- Bioinformatics, 2019, v. 35, n. 18, p. 3273, doi. 10.1093/bioinformatics/btz125
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- Article
Temporal network alignment via GoT-WAVE.
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- Bioinformatics, 2019, v. 35, n. 18, p. 3527, doi. 10.1093/bioinformatics/btz119
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- Article
3DBIONOTES v3.0: crossing molecular and structural biology data with genomic variations.
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- Bioinformatics, 2019, v. 35, n. 18, p. 3512, doi. 10.1093/bioinformatics/btz118
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- Article
SUBSTRA: Supervised Bayesian Patient Stratification.
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- Bioinformatics, 2019, v. 35, n. 18, p. 3263, doi. 10.1093/bioinformatics/btz112
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- Article
Explore, edit and leverage genomic annotations using Python GTF toolkit.
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- Bioinformatics, 2019, v. 35, n. 18, p. 3487, doi. 10.1093/bioinformatics/btz116
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- Article
Biomolecular Reaction and Interaction Dynamics Global Environment (BRIDGE).
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- Bioinformatics, 2019, v. 35, n. 18, p. 3508, doi. 10.1093/bioinformatics/btz107
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- Article
Finding enzyme cofactors in Protein Data Bank.
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- Bioinformatics, 2019, v. 35, n. 18, p. 3510, doi. 10.1093/bioinformatics/btz115
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- Article
Identification of caveolin-1 domain signatures via machine learning and graphlet analysis of single-molecule super-resolution data.
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- Bioinformatics, 2019, v. 35, n. 18, p. 3468, doi. 10.1093/bioinformatics/btz113
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- Article
BioKEEN: a library for learning and evaluating biological knowledge graph embeddings.
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- Bioinformatics, 2019, v. 35, n. 18, p. 3538, doi. 10.1093/bioinformatics/btz117
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- Article
DeepAffinity: interpretable deep learning of compound–protein affinity through unified recurrent and convolutional neural networks.
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- Bioinformatics, 2019, v. 35, n. 18, p. 3329, doi. 10.1093/bioinformatics/btz111
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- Article
ST-Steiner: a spatio-temporal gene discovery algorithm.
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- Bioinformatics, 2019, v. 35, n. 18, p. 3433, doi. 10.1093/bioinformatics/btz110
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- Article
Differential network enrichment analysis reveals novel lipid pathways in chronic kidney disease.
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- Bioinformatics, 2019, v. 35, n. 18, p. 3441, doi. 10.1093/bioinformatics/btz114
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- Article
Compositional data network analysis via lasso penalized D-trace loss.
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- Bioinformatics, 2019, v. 35, n. 18, p. 3404, doi. 10.1093/bioinformatics/btz098
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- Article
rMETL: sensitive mobile element insertion detection with long read realignment.
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- Bioinformatics, 2019, v. 35, n. 18, p. 3484, doi. 10.1093/bioinformatics/btz106
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- Article
eBDIMS server: protein transition pathways with ensemble analysis in 2D-motion spaces.
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- Bioinformatics, 2019, v. 35, n. 18, p. 3505, doi. 10.1093/bioinformatics/btz104
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- Article
Comparison of six breast cancer classifiers using qPCR.
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- Bioinformatics, 2019, v. 35, n. 18, p. 3412, doi. 10.1093/bioinformatics/btz103
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- Article
refineD: improved protein structure refinement using machine learning based restrained relaxation.
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- Bioinformatics, 2019, v. 35, n. 18, p. 3320, doi. 10.1093/bioinformatics/btz101
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- Article
Bacterial Feature Finder (BaFF)—a system for extracting features overrepresented in sets of prokaryotic organisms.
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- Bioinformatics, 2019, v. 35, n. 18, p. 3482, doi. 10.1093/bioinformatics/btz099
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- Article
Network inference performance complexity: a consequence of topological, experimental and algorithmic determinants.
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- Bioinformatics, 2019, v. 35, n. 18, p. 3421, doi. 10.1093/bioinformatics/btz105
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- Publication type:
- Article
NFPws: a web server for delineating broadly neutralizing antibody specificities from serum HIV-1 neutralization data.
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- Bioinformatics, 2019, v. 35, n. 18, p. 3502, doi. 10.1093/bioinformatics/btz097
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- Article
mCSEA: detecting subtle differentially methylated regions.
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- Bioinformatics, 2019, v. 35, n. 18, p. 3257, doi. 10.1093/bioinformatics/btz096
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- Article
Biological sequence modeling with convolutional kernel networks.
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- Bioinformatics, 2019, v. 35, n. 18, p. 3294, doi. 10.1093/bioinformatics/btz094
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- Article
RiboD: a comprehensive database for prokaryotic riboswitches.
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- Bioinformatics, 2019, v. 35, n. 18, p. 3541, doi. 10.1093/bioinformatics/btz093
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- Article
Miso: an R package for multiple isotope labeling assisted metabolomics data analysis.
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- Bioinformatics, 2019, v. 35, n. 18, p. 3524, doi. 10.1093/bioinformatics/btz092
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- Article
KOnezumi: a web application for automating gene disruption strategies to generate knockout mice.
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- Bioinformatics, 2019, v. 35, n. 18, p. 3479, doi. 10.1093/bioinformatics/btz090
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- Article
How well do RNA-Seq differential gene expression tools perform in a complex eukaryote? A case study in Arabidopsis thaliana.
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- Bioinformatics, 2019, v. 35, n. 18, p. 3372, doi. 10.1093/bioinformatics/btz089
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- Article
Gsmodutils: a python based framework for test-driven genome scale metabolic model development.
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- Bioinformatics, 2019, v. 35, n. 18, p. 3397, doi. 10.1093/bioinformatics/btz088
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- Article
ChimeraUGEM: unsupervised gene expression modeling in any given organism.
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- Bioinformatics, 2019, v. 35, n. 18, p. 3365, doi. 10.1093/bioinformatics/btz080
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- Article
Finding de novo methylated DNA motifs.
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- Bioinformatics, 2019, v. 35, n. 18, p. 3287, doi. 10.1093/bioinformatics/btz079
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PROSSTT: probabilistic simulation of single-cell RNA-seq data for complex differentiation processes.
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- Bioinformatics, 2019, v. 35, n. 18, p. 3517, doi. 10.1093/bioinformatics/btz078
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- Article
Gag-protease coevolution shapes the outcome of lopinavir-inclusive treatment regimens in chronically infected HIV-1 subtype C patients.
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- Bioinformatics, 2019, v. 35, n. 18, p. 3219, doi. 10.1093/bioinformatics/btz076
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G4Hunter web application: a web server for G-quadruplex prediction.
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- Bioinformatics, 2019, v. 35, n. 18, p. 3493, doi. 10.1093/bioinformatics/btz087
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IGLOSS: iterative gapless local similarity search.
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- Bioinformatics, 2019, v. 35, n. 18, p. 3491, doi. 10.1093/bioinformatics/btz086
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- Article
Top-Down Garbage Collector: a tool for selecting high-quality top-down proteomics mass spectra.
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- Bioinformatics, 2019, v. 35, n. 18, p. 3489, doi. 10.1093/bioinformatics/btz085
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- Article
Multispectral tracing in densely labeled mouse brain with nTracer.
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- Bioinformatics, 2019, v. 35, n. 18, p. 3544, doi. 10.1093/bioinformatics/btz084
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- Article
Structured crowdsourcing enables convolutional segmentation of histology images.
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- Bioinformatics, 2019, v. 35, n. 18, p. 3461, doi. 10.1093/bioinformatics/btz083
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SaGePhy: an improved phylogenetic simulation framework for gene and subgene evolution.
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- Bioinformatics, 2019, v. 35, n. 18, p. 3496, doi. 10.1093/bioinformatics/btz081
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GLAD: GLycan Array Dashboard, a visual analytics tool for glycan microarrays.
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- Bioinformatics, 2019, v. 35, n. 18, p. 3536, doi. 10.1093/bioinformatics/btz075
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- Article
ebGSEA: an improved Gene Set Enrichment Analysis method for Epigenome-Wide-Association Studies.
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- Bioinformatics, 2019, v. 35, n. 18, p. 3514, doi. 10.1093/bioinformatics/btz073
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- Article
Assembly Graph Browser: interactive visualization of assembly graphs.
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- Bioinformatics, 2019, v. 35, n. 18, p. 3476, doi. 10.1093/bioinformatics/btz072
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- Article
Reviewer-coerced citation: case report, update on journal policy and suggestions for future prevention.
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- Bioinformatics, 2019, v. 35, n. 18, p. 3217, doi. 10.1093/bioinformatics/btz071
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- Publication type:
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PMC text mining subset in BioC: about three million full-text articles and growing.
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- Bioinformatics, 2019, v. 35, n. 18, p. 3533, doi. 10.1093/bioinformatics/btz070
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- Article
Aligning optical maps to de Bruijn graphs.
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- Bioinformatics, 2019, v. 35, n. 18, p. 3250, doi. 10.1093/bioinformatics/btz069
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- Article
Rapid alignment-free phylogenetic identification of metagenomic sequences.
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- Bioinformatics, 2019, v. 35, n. 18, p. 3303, doi. 10.1093/bioinformatics/btz068
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- Article
DeepAMR for predicting co-occurrent resistance of Mycobacterium tuberculosis.
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- Bioinformatics, 2019, v. 35, n. 18, p. 3240, doi. 10.1093/bioinformatics/btz067
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- Article
Batch-normalization of cerebellar and medulloblastoma gene expression datasets utilizing empirically defined negative control genes.
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- Bioinformatics, 2019, v. 35, n. 18, p. 3357, doi. 10.1093/bioinformatics/btz066
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- Article
A unified approach for sparse dynamical system inference from temporal measurements.
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- Bioinformatics, 2019, v. 35, n. 18, p. 3387, doi. 10.1093/bioinformatics/btz065
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- Publication type:
- Article
Variational infinite heterogeneous mixture model for semi-supervised clustering of heart enhancers.
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- Bioinformatics, 2019, v. 35, n. 18, p. 3232, doi. 10.1093/bioinformatics/btz064
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- Article
Modeling cell proliferation in human acute myeloid leukemia xenografts.
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- Bioinformatics, 2019, v. 35, n. 18, p. 3378, doi. 10.1093/bioinformatics/btz063
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- Article