Works matching IS 13674803 AND DT 2018 AND VI 34 AND IP 12

Results: 30

ChemDistiller: an engine for metabolite annotation in mass spectrometry.

Published in:

Bioinformatics, 2018, v. 34, n. 12, p. 2096, doi. 10.1093/bioinformatics/bty080

By:

Laponogov, Ivan;
Sadawi, Noureddin;
Galea, Dieter;
Mirnezami, Reza;
Veselkov, Kirill A

Publication type:

Article

ssbio: a Python framework for structural systems biology.

Published in:

Bioinformatics, 2018, v. 34, n. 12, p. 2155, doi. 10.1093/bioinformatics/bty077

By:

Mih, Nathan;
Brunk, Elizabeth;
Chen, Ke;
Catoiu, Edward;
Sastry, Anand;
Kavvas, Erol;
Monk, Jonathan M;
Zhang, Zhen;
Palsson, Bernhard O

Publication type:

Article

HIITE: HIV-1 incidence and infection time estimator.

Published in:

Bioinformatics, 2018, v. 34, n. 12, p. 2046, doi. 10.1093/bioinformatics/bty073

By:

Park, Sung Yong;
Love, Tanzy M T;
Kapoor, Shivankur;
Lee, Ha Youn

Publication type:

Article

GCevobase: an evolution-based database for GC content in eukaryotic genomes.

Published in:

Bioinformatics, 2018, v. 34, n. 12, p. 2129, doi. 10.1093/bioinformatics/bty068

By:

Wang, Dapeng

Publication type:

Article

GCPred: a web tool for guanylyl cyclase functional centre prediction from amino acid sequence.

Published in:

Bioinformatics, 2018, v. 34, n. 12, p. 2134, doi. 10.1093/bioinformatics/bty067

By:

Xu, Nuo;
Fu, Dongfang;
Li, Shiang;
Wang, Yuxuan;
Wong, Aloysius

Publication type:

Article

KMgene: a unified R package for gene-based association analysis for complex traits.

Published in:

Bioinformatics, 2018, v. 34, n. 12, p. 2144, doi. 10.1093/bioinformatics/bty066

By:

Yan, Qi;
Fang, Zhou;
Chen, Wei

Publication type:

Article

Selenzyme: enzyme selection tool for pathway design.

Published in:

Bioinformatics, 2018, v. 34, n. 12, p. 2153, doi. 10.1093/bioinformatics/bty065

By:

Carbonell, Pablo;
Wong, Jerry;
Swainston, Neil;
Takano, Eriko;
Turner, Nicholas J;
Scrutton, Nigel S;
Kell, Douglas B;
Breitling, Rainer;
Faulon, Jean-Loup

Publication type:

Article

INfORM: Inference of NetwOrk Response Modules.

Published in:

Bioinformatics, 2018, v. 34, n. 12, p. 2136, doi. 10.1093/bioinformatics/bty063

By:

Marwah, Veer Singh;
Kinaret, Pia Anneli Sofia;
Serra, Angela;
Scala, Giovanni;
Lauerma, Antti;
Fortino, Vittorio;
Greco, Dario

Publication type:

Article

omicsPrint: detection of data linkage errors in multiple omics studies.

Published in:

Bioinformatics, 2018, v. 34, n. 12, p. 2142, doi. 10.1093/bioinformatics/bty062

By:

Iterson, Maarten van;
Cats, Davy;
Hop, Paul;
Consortium, BIOS;
Heijmans, Bastiaan T

Publication type:

Article

Improving SNP prioritization and pleiotropic architecture estimation by incorporating prior knowledge using graph-GPA.

Published in:

Bioinformatics, 2018, v. 34, n. 12, p. 2139, doi. 10.1093/bioinformatics/bty061

By:

Kim, Hang J;
Yu, Zhenning;
Lawson, Andrew;
Zhao, Hongyu;
Chung, Dongjun

Publication type:

Article

L1000FWD: fireworks visualization of drug-induced transcriptomic signatures.

Published in:

Bioinformatics, 2018, v. 34, n. 12, p. 2150, doi. 10.1093/bioinformatics/bty060

By:

Wang, Zichen;
Lachmann, Alexander;
Keenan, Alexandra B;
Ma'ayan, Avi

Publication type:

Article

Progressive approach for SNP calling and haplotype assembly using single molecular sequencing data.

Published in:

Bioinformatics, 2018, v. 34, n. 12, p. 2012, doi. 10.1093/bioinformatics/bty059

By:

Guo, Fei;
Wang, Dan;
Wang, Lusheng

Publication type:

Article

scEpath: energy landscape-based inference of transition probabilities and cellular trajectories from single-cell transcriptomic data.

Published in:

Bioinformatics, 2018, v. 34, n. 12, p. 2077, doi. 10.1093/bioinformatics/bty058

By:

Jin, Suoqin;
MacLean, Adam L;
Peng, Tao;
Nie, Qing

Publication type:

Article

Integrative pipeline for profiling DNA copy number and inferring tumor phylogeny.

Published in:

Bioinformatics, 2018, v. 34, n. 12, p. 2126, doi. 10.1093/bioinformatics/bty057

By:

Urrutia, Eugene;
Chen, Hao;
Zhou, Zilu;
Zhang, Nancy R;
Jiang, Yuchao

Publication type:

Article

Kpax3: Bayesian bi-clustering of large sequence datasets.

Published in:

Bioinformatics, 2018, v. 34, n. 12, p. 2132, doi. 10.1093/bioinformatics/bty056

By:

Pessia, Alberto;
Corander, Jukka

Publication type:

Article

AbDesigner3D: a structure-guided tool for peptide-based antibody production.

Published in:

Bioinformatics, 2018, v. 34, n. 12, p. 2158, doi. 10.1093/bioinformatics/bty055

By:

Saethang, Thammakorn;
Hodge, Kenneth;
Kimkong, Ingorn;
Payne, D Michael;
Knepper, Mark A;
Pisitkun, Trairak

Publication type:

Article

GEMMER: GEnome-wide tool for Multi-scale Modeling data Extraction and Representation for Saccharomyces cerevisiae.

Published in:

Bioinformatics, 2018, v. 34, n. 12, p. 2147, doi. 10.1093/bioinformatics/bty052

By:

Mondeel, Thierry D G A;
Crémazy, Frédéric;
Barberis, Matteo

Publication type:

Article

Novel overlapping subgraph clustering for the detection of antigen epitopes.

Published in:

Bioinformatics, 2018, v. 34, n. 12, p. 2061, doi. 10.1093/bioinformatics/bty051

By:

Zhao, Liang;
Wu, Shaogui;
Jiang, Jiawen;
Li, Wencui;
Luo, Jie;
Li, Jinyan

Publication type:

Article

Spectral clustering based on learning similarity matrix.

Published in:

Bioinformatics, 2018, v. 34, n. 12, p. 2069, doi. 10.1093/bioinformatics/bty050

By:

Park, Seyoung;
Zhao, Hongyu

Publication type:

Article

A low-complexity add-on score for protein remote homology search with COMER.

Published in:

Bioinformatics, 2018, v. 34, n. 12, p. 2037, doi. 10.1093/bioinformatics/bty048

By:

Margelevičius, Mindaugas

Publication type:

Article

TSAPA: identification of tissue-specific alternative polyadenylation sites in plants.

Published in:

Bioinformatics, 2018, v. 34, n. 12, p. 2123, doi. 10.1093/bioinformatics/bty044

By:

Ji, Guoli;
Chen, Moliang;
Ye, Wenbin;
Zhu, Sheng;
Ye, Congting;
Su, Yaru;
Peng, Haonan;
Wu, Xiaohui

Publication type:

Article

Accurity: accurate tumor purity and ploidy inference from tumor-normal WGS data by jointly modelling somatic copy number alterations and heterozygous germline single-nucleotide-variants.

Published in:

Bioinformatics, 2018, v. 34, n. 12, p. 2004, doi. 10.1093/bioinformatics/bty043

By:

Luo, Zhihui;
Fan, Xinping;
Su, Yao;
Huang, Yu S

Publication type:

Article

EPS-LASSO: test for high-dimensional regression under extreme phenotype sampling of continuous traits.

Published in:

Bioinformatics, 2018, v. 34, n. 12, p. 1996, doi. 10.1093/bioinformatics/bty042

By:

Xu, Chao;
Fang, Jian;
Shen, Hui;
Wang, Yu-Ping;
Deng, Hong-Wen

Publication type:

Article

Evolutionary relationship between the cysteine and histidine rich domains (CHORDs) and Btk-type zinc fingers.

Published in:

Bioinformatics, 2018, v. 34, n. 12, p. 1981, doi. 10.1093/bioinformatics/bty041

By:

Kaur, Gurmeet;
Subramanian, Srikrishna

Publication type:

Article

TOXsIgN: a cross-species repository for toxicogenomic signatures.

Published in:

Bioinformatics, 2018, v. 34, n. 12, p. 2116, doi. 10.1093/bioinformatics/bty040

By:

Darde, Thomas A;
Gaudriault, Pierre;
Beranger, Rémi;
Lancien, Clément;
Caillarec-Joly, Annaëlle;
Sallou, Olivier;
Bonvallot, Nathalie;
Chevrier, Cécile;
Mazaud-Guittot, Séverine;
Jégou, Bernard

Publication type:

Article

O-GlcNAcPRED-II: an integrated classification algorithm for identifying O-GlcNAcylation sites based on fuzzy undersampling and a K-means PCA oversampling technique.

Published in:

Bioinformatics, 2018, v. 34, n. 12, p. 2029, doi. 10.1093/bioinformatics/bty039

By:

Jia, Cangzhi;
Zuo, Yun;
Zou, Quan

Publication type:

Article

HPViewer: sensitive and specific genotyping of human papillomavirus in metagenomic DNA.

Published in:

Bioinformatics, 2018, v. 34, n. 12, p. 1986, doi. 10.1093/bioinformatics/bty037

By:

Hao, Yuhan;
Yang, Liying;
Neto, Antonio Galvao;
Amin, Milan R;
Kelly, Dervla;
Brown, Stuart M;
Branski, Ryan C;
Pei, Zhiheng

Publication type:

Article

PhenoRank: reducing study bias in gene prioritization through simulation.

Published in:

Bioinformatics, 2018, v. 34, n. 12, p. 2087, doi. 10.1093/bioinformatics/bty028

By:

Cornish, Alex J;
David, Alessia;
Sternberg, Michael J E

Publication type:

Article

BAUM: improving genome assembly by adaptive unique mapping and local overlap-layout-consensus approach.

Published in:

Bioinformatics, 2018, v. 34, n. 12, p. 2019, doi. 10.1093/bioinformatics/bty020

By:

Wang, Anqi;
Wang, Zhanyu;
Li, Zheng;
Li, Lei M

Publication type:

Article

Data and text mining: Towards self-learning based hypotheses generation in biomedical text domain.

Published in:

Bioinformatics, 2018, v. 34, n. 12, p. 2103, doi. 10.1093/bioinformatics/btx837

By:

Gopalakrishnan, Vishrawas;
Jha, Kishlay;
Xun, Guangxu;
Ngo, Hung Q;
Zhang, Aidong

Publication type:

Article