Works matching IS 13674803 AND DT 2017 AND VI 33 AND IP 6

Results: 26

PRINCESS: Privacy-protecting Rare disease International Network Collaboration via Encryption through Software guard extensionS.

Published in:

Bioinformatics, 2017, v. 33, n. 6, p. 871, doi. 10.1093/bioinformatics/btw758

By:

Feng Chen;
Shuang Wang;
Xiaoqian Jiang;
Sijie Ding;
Yao Lu;
Jihoon Kim;
Sahinalp, S. Cenk;
Chisato Shimizu;
Burns, Jane C.;
Wright, Victoria J.;
Png, Eileen;
Hibberd, Martin L.;
Lloyd, David D.;
Hai Yang;
Telenti, Amalio;
Bloss, Cinnamon S.;
Fox, Dov;
Lauter, Kristin;
Ohno-Machado, Lucila

Publication type:

Article

GE-mini: a mobile APP for large-scale gene expression visualization.

Published in:

Bioinformatics, 2017, v. 33, n. 6, p. 941, doi. 10.1093/bioinformatics/btw775

By:

Zefang Tang;
Chenwei Li;
Karena Zhang;
Mingyu Yang;
Xueda Hu

Publication type:

Article

SNP interaction pattern identifier (SIPI): an intensive search for SNP-SNP interaction patterns.

Published in:

Bioinformatics, 2017, v. 33, n. 6, p. 822, doi. 10.1093/bioinformatics/btw762

By:

Hui-Yi Lin;
Dung-Tsa Chen;
Po-Yu Huang;
Yung-Hsin Liu;
Ochoa, Augusto;
Zabaleta, Jovanny;
Mercante, Donald E.;
Fang, Zhide;
Sellers, Thomas A.;
Pow-Sang, Julio M.;
Chia-Ho Cheng;
Eeles, Rosalind;
Easton, Doug;
Kote-Jarai, Zsofia;
Al Olama, Ali Amin;
Benlloch, Sara;
Muir, Kenneth;
Giles, Graham G.;
Wiklund, Fredrik;
Gronberg, Henrik

Publication type:

Article

An ensemble approach to protein fold classification by integration of template-based assignment and support vector machine classifier.

Published in:

Bioinformatics, 2017, v. 33, n. 6, p. 863, doi. 10.1093/bioinformatics/btw768

By:

Jiaqi Xia;
Zhenling Peng;
Dawei Qi;
Hongbo Mu;
Jianyi Yang

Publication type:

Article

PBIT: Pipeline Builder for Identification of drug Targets for infectious diseases.

Published in:

Bioinformatics, 2017, v. 33, n. 6, p. 929, doi. 10.1093/bioinformatics/btw760

By:

Shende, Gauri;
Haldankar, Harshala;
Barai, Ram Shankar;
Bharmal, Mohammed Husain;
Shetty, Vinit;
Idicula-Thomas, Susan

Publication type:

Article

DNABarcodes: an R package for the systematic construction of DNA sample tags.

Published in:

Bioinformatics, 2017, v. 33, n. 6, p. 920, doi. 10.1093/bioinformatics/btw759

By:

Buschmann, Tilo

Publication type:

Article

The PPI3D web server for searching, analyzing and modeling protein--protein interactions in the context of 3D structures.

Published in:

Bioinformatics, 2017, v. 33, n. 6, p. 935, doi. 10.1093/bioinformatics/btw756

By:

Dapkũnas, Justas;
Timinskas, Albertas;
Olechnovič, Kliment;
Margelevičius, Mindaugas;
Dičiũnas, Rytis;
Venclovas, Česlovas

Publication type:

Article

Exploring the predictive power of polygenic scores derived from genome-wide association studies: a study of 10 complex traits.

Published in:

Bioinformatics, 2017, v. 33, n. 6, p. 886, doi. 10.1093/bioinformatics/btw745

By:

Hon-Cheong So;
Sham, Pak C.

Publication type:

Article

node.dating: dating ancestors in phylogenetic trees in R.

Published in:

Bioinformatics, 2017, v. 33, n. 6, p. 932, doi. 10.1093/bioinformatics/btw744

By:

Jones, Bradley R.;
Poon, Art F. Y.

Publication type:

Article

Training alignment parameters for arbitrary sequencers with LAST-TRAIN.

Published in:

Bioinformatics, 2017, v. 33, n. 6, p. 926, doi. 10.1093/bioinformatics/btw742

By:

Michiaki Hamada;
Yukiteru Ono;
Kiyoshi Asai;
Frith, Martin C.

Publication type:

Article

caspo: a toolbox for automated reasoning on the response of logical signaling networks families.

Published in:

Bioinformatics, 2017, v. 33, n. 6, p. 947, doi. 10.1093/bioinformatics/btw738

By:

Videla, Santiago;
Saez-Rodriguez, Julio;
Guziolowski, Carito;
Siegel, Anne

Publication type:

Article

AltORFev facilitates the prediction of alternative open reading frames in eukaryotic mRNAs.

Published in:

Bioinformatics, 2017, v. 33, n. 6, p. 923, doi. 10.1093/bioinformatics/btw736

By:

Kochetov, Alex V.;
Allmer, Jens;
Klimenko, Alexandra I.;
Zuraev, Bulat S.;
Matushkin, Yury G.;
Lashin, Sergey A.

Publication type:

Article

iSmaRT: a toolkit for a comprehensive analysis of small RNA-Seq data.

Published in:

Bioinformatics, 2017, v. 33, n. 6, p. 938, doi. 10.1093/bioinformatics/btw734

By:

Panero, Riccardo;
Rinaldi, Antonio;
Memoli, Domenico;
Nassa, Giovanni;
Ravo, Maria;
Rizzo, Francesca;
Tarallo, Roberta;
Milanesi, Luciano;
Weisz, Alessandro;
Giurato, Giorgio

Publication type:

Article

RBPPred: predicting RNA-binding proteins from sequence using SVM.

Published in:

Bioinformatics, 2017, v. 33, n. 6, p. 854, doi. 10.1093/bioinformatics/btw730

By:

Xiaoli Zhang;
Shiyong Liu

Publication type:

Article

Hum-mPLoc 3.0: prediction enhancement of human protein subcellular localization through modeling the hidden correlations of gene ontology and functional domain features.

Published in:

Bioinformatics, 2017, v. 33, n. 6, p. 843, doi. 10.1093/bioinformatics/btw723

By:

Hang Zhou;
Yang Yang;
Hong-Bin Shen

Publication type:

Article

DACE: a scalable DP-means algorithm for clustering extremely large sequence data.

Published in:

Bioinformatics, 2017, v. 33, n. 6, p. 834, doi. 10.1093/bioinformatics/btw722

By:

Linhao Jiang;
Yichao Dong;
Ning Chen;
Ting Chen

Publication type:

Article

MRUniNovo: an efficient tool for de novo peptide sequencing utilizing the hadoop distributed computing framework.

Published in:

Bioinformatics, 2017, v. 33, n. 6, p. 944, doi. 10.1093/bioinformatics/btw721

By:

Chuang Li;
Tao Chen;
Qiang He;
Yunping Zhu;
Kenli Li

Publication type:

Article

Novel probabilistic models of spatial genetic ancestry with applications to stratification correction in genome-wide association studies.

Published in:

Bioinformatics, 2017, v. 33, n. 6, p. 879, doi. 10.1093/bioinformatics/btw720

By:

Bhaskar, Anand;
Javanmard, Adel;
Courtade, Thomas A.;
Tse, David

Publication type:

Article

Predict drug permeability to blood--brain-barrier from clinical phenotypes: drug side effects and drug indications.

Published in:

Bioinformatics, 2017, v. 33, n. 6, p. 901, doi. 10.1093/bioinformatics/btw713

By:

Zhen Gao;
Yang Chen;
Xiaoshu Cai;
Rong Xu

Publication type:

Article

CellSort: a support vector machine tool for optimizing fluorescence-activated cell sorting and reducing experimental effort.

Published in:

Bioinformatics, 2017, v. 33, n. 6, p. 909, doi. 10.1093/bioinformatics/btw710

By:

Yu, Jessica S.;
Pertusi, Dante A.;
Adeniran, Adebola V.;
Tyo, Keith E. J.

Publication type:

Article

Improving flux predictions by integrating data from multiple strains.

Published in:

Bioinformatics, 2017, v. 33, n. 6, p. 893, doi. 10.1093/bioinformatics/btw706

By:

Long, Matthew R.;
Reed, Jennifer L.

Publication type:

Article

HiLive: real-time mapping of illumina reads while sequencing.

Published in:

Bioinformatics, 2017, v. 33, n. 6, p. 917, doi. 10.1093/bioinformatics/btw659

By:

Lindner, Martin S.;
Strauch, Benjamin;
Schulze, Jakob M.;
Tausch, Simon H.;
Dabrowski, Piotr W.;
Nitsche, Andreas;
Renard, Bernhard Y.

Publication type:

Article

Designing robust watermark barcodes for multiplex long-read sequencing.

Published in:

Bioinformatics, 2017, v. 33, n. 6, p. 807, doi. 10.1093/bioinformatics/btw322

By:

Ezpeleta, Joaquín;
Krsticevic, Flavia J.;
Bulacio, Pilar;
Tapia, Elizabeth

Publication type:

Article

Accurate self-correction of errors in long reads using de Bruijn graphs.

Published in:

Bioinformatics, 2017, v. 33, n. 6, p. 799, doi. 10.1093/bioinformatics/btw321

By:

Salmela, Leena;
Walve, Riku;
Rivals, Eric;
Ukkonen, Esko

Publication type:

Article

COCACOLA: binning metagenomic contigs using sequence COmposition, read CoverAge, CO-alignment and paired-end read LinkAge.

Published in:

Bioinformatics, 2017, v. 33, n. 6, p. 791, doi. 10.1093/bioinformatics/btw290

By:

Yang Young Lu;
Ting Chen;
Fuhrman, Jed A.;
Fengzhu Sun

Publication type:

Article

WeSME: uncovering mutual exclusivity of cancer drivers and beyond.

Published in:

Bioinformatics, 2017, v. 33, n. 6, p. 814, doi. 10.1093/bioinformatics/btw242

By:

Yoo-Ah Kim;
Madan, Sanna;
Przytycka, Teresa M.

Publication type:

Article