Works matching IS 13674803 AND DT 2017 AND VI 33 AND IP 16

Results: 34

iATC-mISF: a multi-label classifier for predicting the classes of anatomical therapeutic chemicals.

Published in:

2017

By:

Xiang Cheng;
Shu-Guang Zhao;
Xuan Xiao;
Kuo-Chen Chou

Publication type:

Correction Notice

ALTRE: workflow for defining ALTered regulatory elements using chromatin accessibility data.

Published in:

2017

By:

Baskin, Elizabeth;
Farouni, Rick;
Mathé, Ewy A.

Publication type:

Correction Notice

MOST-visualization: software for producing automated textbook-style maps of genome-scale metabolic networks.

Published in:

Bioinformatics, 2017, v. 33, n. 16, p. 2596, doi. 10.1093/bioinformatics/btx240

By:

Kelley, James J.;
Maor, Shay;
Min Kyung Kim;
Lane, Anatoliy;
Lun, Desmond S.

Publication type:

Article

Mapping genes for calcium signaling and their associated human genetic disorders.

Published in:

Bioinformatics, 2017, v. 33, n. 16, p. 2547, doi. 10.1093/bioinformatics/btx225

By:

Hörtenhuber, Matthias;
Toledo, Enrique M.;
Smedler, Erik;
Arenas, Ernest;
Malmersjö, Seth;
Louhivuori, Lauri;
Uhlén, Per

Publication type:

Article

DMINDA 2.0: integrated and systematic views of regulatory DNA motif identification and analyses.

Published in:

Bioinformatics, 2017, v. 33, n. 16, p. 2586, doi. 10.1093/bioinformatics/btx223

By:

Jinyu Yang;
Xin Chen;
McDermaid, Adam;
Qin Ma

Publication type:

Article

SVMQA: support--vector-machine-based protein single-model quality assessment.

Published in:

Bioinformatics, 2017, v. 33, n. 16, p. 2496, doi. 10.1093/bioinformatics/btx222

By:

Balachandran Manavalan;
Jooyoung Lee

Publication type:

Article

Domain prediction with probabilistic directional context.

Published in:

Bioinformatics, 2017, v. 33, n. 16, p. 2471, doi. 10.1093/bioinformatics/btx221

By:

Ochoa, Alejandro;
Singh, Mona

Publication type:

Article

HaploMerger2: rebuilding both haploid sub-assemblies from high-heterozygosity diploid genome assembly.

Published in:

Bioinformatics, 2017, v. 33, n. 16, p. 2577, doi. 10.1093/bioinformatics/btx220

By:

Shengfeng Huang;
Mingjing Kang;
Anlong Xu

Publication type:

Article

SubCons: a new ensemble method for improved human subcellular localization predictions.

Published in:

Bioinformatics, 2017, v. 33, n. 16, p. 2464, doi. 10.1093/bioinformatics/btx219

By:

Salvatore, M.;
Warholm, P.;
Shu, N.;
Basile, W.;
Elofsson, A.

Publication type:

Article

A Bayesian group sparse multi-task regression model for imaging genetics.

Published in:

Bioinformatics, 2017, v. 33, n. 16, p. 2513, doi. 10.1093/bioinformatics/btx215

By:

Greenlaw, Keelin;
Szefer, Elena;
Graham, Jinko;
Lesperance, Mary;
Nathoo, Farouk S.

Publication type:

Article

BioCIDER: a Contextualisation InDEx for biological Resources discovery.

Published in:

Bioinformatics, 2017, v. 33, n. 16, p. 2607, doi. 10.1093/bioinformatics/btx213

By:

Horro, Carlos;
Cook, Martin;
Attwood, Teresa K.;
Brazas, Michelle D.;
Hancock, John M.;
Palagi, Patricia;
Corpas, Manuel;
Jimenez, Rafael

Publication type:

Article

ST Pipeline: an automated pipeline for spatial mapping of unique transcripts.

Published in:

Bioinformatics, 2017, v. 33, n. 16, p. 2591, doi. 10.1093/bioinformatics/btx211

By:

Navarro, José Fernández;
Sjöstrand, Joel;
Salmén, Fredrik;
Lundeberg, Joakim;
Ståhl, Patrik L.

Publication type:

Article

miRCat2: accurate prediction of plant and animal microRNAs from next-generation sequencing datasets.

Published in:

Bioinformatics, 2017, v. 33, n. 16, p. 2446, doi. 10.1093/bioinformatics/btx210

By:

Paicu, Claudia;
Mohorianu, Irina;
Stocks, Matthew;
Ping Xu;
Coince, Aurore;
Billmeier, Martina;
Dalmay, Tamas;
Moulton, Vincent;
Moxon, Simon

Publication type:

Article

Incorporating prior information into differential network analysis using non-paranormal graphical models.

Published in:

Bioinformatics, 2017, v. 33, n. 16, p. 2436, doi. 10.1093/bioinformatics/btx208

By:

Xiao-Fei Zhang;
Le Ou-Yang;
Hong Yan

Publication type:

Article

Machine learning in computational biology to accelerate high-throughput protein expression.

Published in:

Bioinformatics, 2017, v. 33, n. 16, p. 2487, doi. 10.1093/bioinformatics/btx207

By:

Sastry, Anand;
Monk, Jonathan;
Tegel, Hanna;
Uhlen, Mathias;
Palsson, Bernhard O.;
Rockberg, Johan;
Brunk, Elizabeth

Publication type:

Article

RTK: efficient rarefaction analysis of large datasets.

Published in:

Bioinformatics, 2017, v. 33, n. 16, p. 2594, doi. 10.1093/bioinformatics/btx206

By:

Saary, Paul;
Forslund, Kristoffer;
Bork, Peer;
Hildebrand, Falk

Publication type:

Article

Systemic evaluation of cellular reprogramming processes exploiting a novel R-tool: eegc.

Published in:

Bioinformatics, 2017, v. 33, n. 16, p. 2532, doi. 10.1093/bioinformatics/btx205

By:

Xiaoyuan Zhou;
Guofeng Meng;
Nardini, Christine;
Hongkang Mei

Publication type:

Article

ploidyNGS: visually exploring ploidy with Next Generation Sequencing data.

Published in:

Bioinformatics, 2017, v. 33, n. 16, p. 2575, doi. 10.1093/bioinformatics/btx204

By:

dos Santos, Renato Augusto Correê;
Goldman, Gustavo Henrique;
Ria ño-Pachón, Diego Mauricio

Publication type:

Article

Use of AAScatterPlot tool for monitoring the evolution of the hemagglutinin cleavage site in H9 avian influenza viruses.

Published in:

Bioinformatics, 2017, v. 33, n. 16, p. 2431, doi. 10.1093/bioinformatics/btx203

By:

Lee, DonaldW.;
Whittaker, Gary R.

Publication type:

Article

EzMap: a simple pipeline for reproducible analysis of the human virome.

Published in:

Bioinformatics, 2017, v. 33, n. 16, p. 2573, doi. 10.1093/bioinformatics/btx202

By:

Czeczko, Patrick;
Greenway, Steven C.;
de Koning, A. P. Jason

Publication type:

Article

FunChIP: an R/Bioconductor package for functional classification of ChIP-seq shapes.

Published in:

Bioinformatics, 2017, v. 33, n. 16, p. 2570, doi. 10.1093/bioinformatics/btx201

By:

Parodi, Alice C. L.;
Sangalli, Laura M.;
Vantini, Simone;
Amati, Bruno;
Secchi, Piercesare;
Morelli, Marco J.

Publication type:

Article

TIN-X: target importance and novelty explorer.

Published in:

Bioinformatics, 2017, v. 33, n. 16, p. 2601, doi. 10.1093/bioinformatics/btx200

By:

Cannon, Daniel C.;
Yang, Jeremy J.;
Mathias, Stephen L.;
Ursu, Oleg;
Mani, Subramani;
Waller, Anna;
Schürer, Stephan C.;
Jensen, Lars Juhl;
Sklar, Larry A.;
Bologa, Cristian G.;
Oprea, Tudor I.

Publication type:

Article

Gracob: a novel graph-based constant-column biclustering method for mining growth phenotype data.

Published in:

Bioinformatics, 2017, v. 33, n. 16, p. 2523, doi. 10.1093/bioinformatics/btx199

By:

Alzahrani, Majed;
Hiroyuki Kuwahara;
Wei Wang;
Xin Gao

Publication type:

Article

MISA-web: a web server for microsatellite prediction.

Published in:

Bioinformatics, 2017, v. 33, n. 16, p. 2583, doi. 10.1093/bioinformatics/btx198

By:

Beier, Sebastian;
Thiel, Thomas;
Münch, Thomas;
Scholz, Uwe;
Mascher, Martin

Publication type:

Article

PyGOLD: a python based API for docking based virtual screening workflow generation.

Published in:

Bioinformatics, 2017, v. 33, n. 16, p. 2589, doi. 10.1093/bioinformatics/btx197

By:

Patel, Hitesh;
Brinkjost, Tobias;
Koch, Oliver

Publication type:

Article

Removal of batch effects using distribution-matching residual networks.

Published in:

Bioinformatics, 2017, v. 33, n. 16, p. 2539, doi. 10.1093/bioinformatics/btx196

By:

Shaham, Uri;
Stanton, Kelly P.;
Zhao, Jun;
Huamin Li;
Raddassi, Khadir;
Montgomery, Ruth;
Kluger, Yuval

Publication type:

Article

PreMosa: extracting 2D surfaces from 3D microscopy mosaics.

Published in:

Bioinformatics, 2017, v. 33, n. 16, p. 2563, doi. 10.1093/bioinformatics/btx195

By:

Blasse, Corinna;
Saalfeld, Stephan;
Etournay, Raphaël;
Sagner, Andreas;
Eaton, Suzanne;
Myers, Eugene W.

Publication type:

Article

BioContainers: an open-source and community-driven framework for software standardization.

Published in:

Bioinformatics, 2017, v. 33, n. 16, p. 2580, doi. 10.1093/bioinformatics/btx192

By:

Leprevost, Felipe da Veiga;
Grüning, Björn A.;
Aflitos, Saulo Alves;
Röst, Hannes L.;
Uszkoreit, Julian;
Barsnes, Harald;
Vaudel, Marc;
Moreno, Pablo;
Gatto, Laurent;
Weber, Jonas;
Mingze Bai;
Jimenez, Rafael C.;
Sachsenberg, Timo;
Pfeuffer, Julianus;
Alvarez, Roberto Vera;
Griss, Johannes;
Nesvizhskii, Alexey I.;
Perez-Riverol, Yasset

Publication type:

Article

DeepEM3D: approaching human-level performance on 3D anisotropic EM image segmentation.

Published in:

Bioinformatics, 2017, v. 33, n. 16, p. 2555, doi. 10.1093/bioinformatics/btx188

By:

Tao Zeng;
Bian Wu;
Shuiwang Ji

Publication type:

Article

A penalized regression approach to haplotype reconstruction of viral populations arising in early HIV/SIV infection.

Published in:

Bioinformatics, 2017, v. 33, n. 16, p. 2455, doi. 10.1093/bioinformatics/btx187

By:

Leviyang, Sivan;
Griva, Igor;
Ita, Sergio;
Johnson, Welkin E.

Publication type:

Article

Fuento: functional enrichment for bioinformatics.

Published in:

Bioinformatics, 2017, v. 33, n. 16, p. 2604, doi. 10.1093/bioinformatics/btx179

By:

Weichselbaum, David;
Zagrovic, Bojan;
Polyansky, Anton A.

Publication type:

Article

GARN2: coarse-grained prediction of 3D structure of large RNA molecules by regret minimization.

Published in:

Bioinformatics, 2017, v. 33, n. 16, p. 2479, doi. 10.1093/bioinformatics/btx175

By:

Boudard, Mélanie;
Barth, Dominique;
Bernauer, Julie;
Denise, Alain;
Cohen, Johanne

Publication type:

Article

TASIC: determining branching models from time series single cell data.

Published in:

Bioinformatics, 2017, v. 33, n. 16, p. 2504, doi. 10.1093/bioinformatics/btx173

By:

Rashid, Sabrina;
Kotton, Darrell N.;
Bar-Joseph, Ziv

Publication type:

Article

mzML2ISA & nmrML2ISA: generating enriched ISA-Tab metadata files from metabolomics XML data.

Published in:

Bioinformatics, 2017, v. 33, n. 16, p. 2598, doi. 10.1093/bioinformatics/btx169

By:

Larralde, Martin;
Lawson, Thomas N.;
Weber, Ralf J. M.;
Moreno, Pablo;
Haug, Kenneth;
Rocca-Serra, Philippe;
Viant, Mark R.;
Steinbeck, Christoph;
Salek, Reza M.

Publication type:

Article