Works matching IS 13674803 AND DT 2016 AND VI 32 AND IP 9

Results: 29

RVTESTS: an efficient and comprehensive tool for rare variant association analysis using sequence data.

Published in:

Bioinformatics, 2016, v. 32, n. 9, p. 1423, doi. 10.1093/bioinformatics/btw079

By:

Xiaowei Zhan;
Youna Hu;
Bingshan Li;
Abecasis, Goncalo R.;
Liu, Dajiang J.

Publication type:

Article

Computational discovery of pathway-level genetic vulnerabilities in non-small-cell lung cancer.

Published in:

Bioinformatics, 2016, v. 32, n. 9, p. 1373, doi. 10.1093/bioinformatics/btw010

By:

Young, Jonathan H.;
Peyton, Michael;
Hyun Seok Kim;
McMillan, Elizabeth;
Minna, John D.;
White, Michael A.;
Marcotte, Edward M.

Publication type:

Article

ChromothripsisDB: a curated database of chromothripsis.

Published in:

Bioinformatics, 2016, v. 32, n. 9, p. 1433, doi. 10.1093/bioinformatics/btv757

By:

Jian Yang;
Gaofeng Deng;
Haoyang Cai

Publication type:

Article

PINCAGE: probabilistic integration of cance genomics data for perturbed gene identification and sample classification.

Published in:

Bioinformatics, 2016, v. 32, n. 9, p. 1353, doi. 10.1093/bioinformatics/btv758

By:

Switnicki, Michał P.;
Juul, Malene;
Madsen, Tobias;
Sørense, Karina D.;
Pedersen, Jakob S.

Publication type:

Article

Improving microRNA target prediction by modeling with unambiguously identified microRNA-target pairs from CLIP-ligation studies.

Published in:

Bioinformatics, 2016, v. 32, n. 9, p. 1316, doi. 10.1093/bioinformatics/btw002

By:

Xiaowei Wang

Publication type:

Article

Robust quantitative scratch assay.

Published in:

Bioinformatics, 2016, v. 32, n. 9, p. 1439, doi. 10.1093/bioinformatics/btv746

By:

Vargas, Andrea;
Angeli, Marc;
Pastrello, Chiara;
McQuaid, Rosanne;
Han Li;
Jurisicova, Andrea;
Jurisica, Igor

Publication type:

Article

ProQ2: estimation of model accuracy implemented in Rosetta.

Published in:

Bioinformatics, 2016, v. 32, n. 9, p. 1411, doi. 10.1093/bioinformatics/btv767

By:

Uziela, Karolis;
Wallner, Björn

Publication type:

Article

MOGEN: a tool for reconstructing 3D models of genomes from chromosomal conformation capturing data.

Published in:

Bioinformatics, 2016, v. 32, n. 9, p. 1286, doi. 10.1093/bioinformatics/btv754

By:

Trieu, Tuan;
Jianlin Cheng

Publication type:

Article

Homology-driven assembly of NOn-redundant protEin sequence sets (NOmESS) for mass spectrometry.

Published in:

Bioinformatics, 2016, v. 32, n. 9, p. 1417, doi. 10.1093/bioinformatics/btv756

By:

Temu, Tikira;
Mann, Matthias;
Räschle, Markus;
Cox, Jürgen

Publication type:

Article

Realizing privacy preserving genome-wide association studies.

Published in:

Bioinformatics, 2016, v. 32, n. 9, p. 1293, doi. 10.1093/bioinformatics/btw009

By:

Simmons, Sean;
Berger, Bonnie

Publication type:

Article

Utilizing the Jaccard index to reveal population stratification in sequencing data: a simulation study and an application to the 1000 Genomes Project.

Published in:

Bioinformatics, 2016, v. 32, n. 9, p. 1366, doi. 10.1093/bioinformatics/btv752

By:

Prokopenko, Dmitry;
Hecker, Julian;
Silverman, Edwin K.;
Pagano, Marcello;
Nöthen, Markus M.;
Dina, Christian;
Lange, Christoph;
Fier, Heide Loehlein

Publication type:

Article

Path2PPI: an R package to predict protein-protein interaction networks for a set of proteins.

Published in:

Bioinformatics, 2016, v. 32, n. 9, p. 1427, doi. 10.1093/bioinformatics/btv765

By:

Philipp, Oliver;
Osiewacz, Heinz D.;
Koch, Ina

Publication type:

Article

simDEF: definition-based semantic similarity measure of gene ontology terms for functional similarity analysis of genes.

Published in:

Bioinformatics, 2016, v. 32, n. 9, p. 1380, doi. 10.1093/bioinformatics/btv755

By:

Pesaranghader, Ahmad;
Matwin, Stan;
Sokolova, Marina;
Beiko, Robert G.

Publication type:

Article

Bayesian variable selection for binary outcomes in high-dimensional genomic studies using non-local priors.

Published in:

Bioinformatics, 2016, v. 32, n. 9, p. 1338, doi. 10.1093/bioinformatics/btv764

By:

Nikooienejad, Amir;
Wenyi Wang;
Johnson, Valen E.

Publication type:

Article

EpimiRBase: a comprehensive database of microRNA-epilepsy associations.

Published in:

Bioinformatics, 2016, v. 32, n. 9, p. 1436, doi. 10.1093/bioinformatics/btw008

By:

Mooney, Catherine;
Becker, Brett A.;
Raoof, Rana;
Henshall, David C.

Publication type:

Article

Collaborative analysis of multi-gigapixel imaging data using Cytomine.

Published in:

Bioinformatics, 2016, v. 32, n. 9, p. 1395, doi. 10.1093/bioinformatics/btw013

By:

Marée, Raphaël;
Rollus, Loïc;
Stévens, Benjamin;
Hoyoux, Renaud;
Louppe, Gilles;
Vandaele, Rémy;
Begon, Jean-Michel;
Kainz, Philipp;
Geurts, Pierre;
Wehenkel, Louis

Publication type:

Article

SPMM: estimating infection duration of multivariant HIV-1 infections.

Published in:

Bioinformatics, 2016, v. 32, n. 9, p. 1308, doi. 10.1093/bioinformatics/btv749

By:

Love, Tanzy M. T.;
Sung Yong Park;
Giorgi, Elena E.;
Mack, Wendy J.;
Perelson, Alan S.;
Ha Youn Lee

Publication type:

Article

OEFinder: a user interface to identify and visualize ordering effects in single-cell RNA-seq data.

Published in:

Bioinformatics, 2016, v. 32, n. 9, p. 1408, doi. 10.1093/bioinformatics/btw004

By:

Ning Leng;
Jeea Choi;
Li-Fang Chu;
Thomson, James A.;
Kendziorski, Christina;
Stewart, Ron

Publication type:

Article

MTG2: an efficient algorithm for multivariate linear mixed model analysis based on genomic information.

Published in:

Bioinformatics, 2016, v. 32, n. 9, p. 1420, doi. 10.1093/bioinformatics/btw012

By:

S. H. Lee;
van der Werf, J. H. J.

Publication type:

Article

MAESTROweb: a web server for structure-based protein stability prediction.

Published in:

2016

By:

Laimer, Josef;
Hiebl-Flach, Julia;
Lengauer, Daniel;
Lackner, Peter

Publication type:

Product Review

Integration of string and de Bruijn graphs for genome assembly.

Published in:

Bioinformatics, 2016, v. 32, n. 9, p. 1301, doi. 10.1093/bioinformatics/btw011

By:

Yao-Ting Huang;
Chen-Fu Liao

Publication type:

Article

UCSC Data Integrator and Variant Annotation Integrator.

Published in:

2016

By:

Hinrichs, Angie S.;
Raney, Brian J.;
Speir, Matthew L.;
Rhead, Brooke;
Casper, Jonathan;
Karolchik, Donna;
Kuhn, Robert M.;
Rosenbloom, Kate R.;
Zweig, Ann S.;
Haussler, David;
Kent, W. James

Publication type:

Web Site Review

MMseqs software suite for fast and deep clustering and searching of large protein sequence sets.

Published in:

2016

By:

Hauser, Maria;
Steinegger, Martin;
Söding, Johannes

Publication type:

Product Review

Characterizing rate limiting steps in transcription from RNA production times in live cells.

Published in:

Bioinformatics, 2016, v. 32, n. 9, p. 1346, doi. 10.1093/bioinformatics/btv744

By:

Häkkinen, Antti;
Ribeiro, Andre S.

Publication type:

Article

VIRALpro: a tool to identify viral capsid and tail sequences.

Published in:

2016

By:

Galiez, Clovis;
Magnan, Christophe N.;
Coste, Francois;
Baldi, Pierre

Publication type:

Product Review

Estimating the number and assignment of clock models in analyses of multigene datasets.

Published in:

Bioinformatics, 2016, v. 32, n. 9, p. 1281, doi. 10.1093/bioinformatics/btw005

By:

Duchêne, Sebastián;
Foster, Charles S. P.;
Ho, Simon Y. W.

Publication type:

Article

Prediction of missing sequences and branch lengths in phylogenomic data.

Published in:

Bioinformatics, 2016, v. 32, n. 9, p. 1331, doi. 10.1093/bioinformatics/btv768

By:

Darriba, Diego;
Weiß, Michael;
Stamatakis, Alexandros

Publication type:

Article

rCGH: a comprehensive array-based genomic profile platform for precision medicine.

Published in:

Bioinformatics, 2016, v. 32, n. 9, p. 1402, doi. 10.1093/bioinformatics/btv718

By:

Commo, Frederic;
Guinney, Justin;
Ferteé, Charles;
Bot, Brian;
Lefebvre, Celine;
Soria, Jean-Charles;
André, Fabrice

Publication type:

Article

Modelling-based experiment retrieval: a case study with gene expression clustering.

Published in:

Bioinformatics, 2016, v. 32, n. 9, p. 1388, doi. 10.1093/bioinformatics/btv762

By:

Blomstedt, Paul;
Dutta, Ritabrata;
Seth, Sohan;
Brazma, Alvis;
Kaski, Samuel

Publication type:

Article