BioNetFit: a fitting tool compatible with BioNetGen, NFsim and distributed computing environments.
- Published in:
- Bioinformatics, 2016, v. 32, n. 5, p. 798, doi. 10.1093/bioinformatics/btv655
- By:
- Publication type:
- Article
Works matching IS 13674803 AND DT 2016 AND VI 32 AND IP 5
Results: 27
1
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SpectralTDF: transition densities of diffusion processes with time-varying selection parameters, mutation rates and effective population sizes.
- Published in:
- Bioinformatics, 2016, v. 32, n. 5, p. 795, doi. 10.1093/bioinformatics/btv627
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- Publication type:
- Article
3
Fit3D: a web application for highly accurate screening of spatial residue patterns in protein structure data.
- Published in:
- Bioinformatics, 2016, v. 32, n. 5, p. 792, doi. 10.1093/bioinformatics/btv637
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- Publication type:
- Article
4
TESS: an R package for efficiently simulating phylogenetic trees and performing Bayesian inference of lineage diversification rates.
- Published in:
- Bioinformatics, 2016, v. 32, n. 5, p. 789, doi. 10.1093/bioinformatics/btv651
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- Publication type:
- Article
5
PHYLUCE is a software package for the analysis of conserved genomic loci.
- Published in:
- Bioinformatics, 2016, v. 32, n. 5, p. 786, doi. 10.1093/bioinformatics/btv646
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- Publication type:
- Article
6
meRanTK: methylated RNA analysis ToolKit.
- Published in:
- Bioinformatics, 2016, v. 32, n. 5, p. 782, doi. 10.1093/bioinformatics/btv647
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- Publication type:
- Article
7
No Promoter Left Behind (NPLB): learn de novo promoter architectures from genome-wide transcription start sites.
- Published in:
- Bioinformatics, 2016, v. 32, n. 5, p. 779, doi. 10.1093/bioinformatics/btv645
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- Publication type:
- Article
8
Riboswitch Scanner: an efficient pHMM-based web-server to detect riboswitches in genomic sequences.
- Published in:
- Bioinformatics, 2016, v. 32, n. 5, p. 776, doi. 10.1093/bioinformatics/btv640
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- Publication type:
- Article
9
catRAPID signature: identification of ribonucleoproteins and RNA-binding regions.
- Published in:
- Bioinformatics, 2016, v. 32, n. 5, p. 773, doi. 10.1093/bioinformatics/btv629
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- Publication type:
- Article
10
MMR: a tool for read multi-mapper resolution.
- Published in:
- Bioinformatics, 2016, v. 32, n. 5, p. 770, doi. 10.1093/bioinformatics/btv624
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- Publication type:
- Article
11
BRAKER1: Unsupervised RNA-Seq-Based Genome Annotation with GeneMark-ET and AUGUSTUS.
- Published in:
- Bioinformatics, 2016, v. 32, n. 5, p. 767, doi. 10.1093/bioinformatics/btv661
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- Publication type:
- Article
12
Realtime analysis and visualization of MinION sequencing data with npReader.
- Published in:
- Bioinformatics, 2016, v. 32, n. 5, p. 764, doi. 10.1093/bioinformatics/btv658
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- Publication type:
- Article
13
Shape component analysis: structure-preserving dimension reduction on biological shape spaces.
- Published in:
- Bioinformatics, 2016, v. 32, n. 5, p. 755, doi. 10.1093/bioinformatics/btv648
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- Publication type:
- Article
14
Fast Optimized Cluster Algorithm for Localizations (FOCAL): a spatial cluster analysis for super-resolved microscopy.
- Published in:
- Bioinformatics, 2016, v. 32, n. 5, p. 747, doi. 10.1093/bioinformatics/btv630
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- Publication type:
- Article
15
Evaluation of hierarchical models for integrative genomic analyses.
- Published in:
- Bioinformatics, 2016, v. 32, n. 5, p. 738, doi. 10.1093/bioinformatics/btv653
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- Publication type:
- Article
16
Exact quantification of cellular robustness in genome-scale metabolic networks.
- Published in:
- Bioinformatics, 2016, v. 32, n. 5, p. 730, doi. 10.1093/bioinformatics/btv649
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- Publication type:
- Article
17
Enumeration and extension of non-equivalent deterministic update schedules in Boolean networks.
- Published in:
- Bioinformatics, 2016, v. 32, n. 5, p. 722, doi. 10.1093/bioinformatics/btv628
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- Publication type:
- Article
18
Probabilistic models of genetic variation in structured populations applied to global human studies.
- Published in:
- Bioinformatics, 2016, v. 32, n. 5, p. 713, doi. 10.1093/bioinformatics/btv641
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- Publication type:
- Article
19
contamDE: differential expression analysis of RNA-seq data for contaminated tumor samples.
- Published in:
- Bioinformatics, 2016, v. 32, n. 5, p. 705, doi. 10.1093/bioinformatics/btv657
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- Publication type:
- Article
20
CAMUR: Knowledge extraction from RNA-seq cancer data through equivalent classification rules.
- Published in:
- Bioinformatics, 2016, v. 32, n. 5, p. 697, doi. 10.1093/bioinformatics/btv635
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- Publication type:
- Article
21
The discordant method: a novel approach for differential correlation.
- Published in:
- Bioinformatics, 2016, v. 32, n. 5, p. 690, doi. 10.1093/bioinformatics/btv633
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- Publication type:
- Article
22
Bayesian inference with historical data-based informative priors improves detection of differentially expressed genes.
- Published in:
- Bioinformatics, 2016, v. 32, n. 5, p. 682, doi. 10.1093/bioinformatics/btv631
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- Publication type:
- Article
23
Specific small-RNA signatures in the amygdala at premotor and motor stages of Parkinson's disease revealed by deep sequencing analysis.
- Published in:
- Bioinformatics, 2016, v. 32, n. 5, p. 673, doi. 10.1093/bioinformatics/btv632
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- Publication type:
- Article
24
Identification of differentially methylated loci using wavelet-based functional mixed models.
- Published in:
- Bioinformatics, 2016, v. 32, n. 5, p. 664, doi. 10.1093/bioinformatics/btv659
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- Publication type:
- Article
25
Comparison of genetic variants in matched samples using thesaurus annotation.
- Published in:
- Bioinformatics, 2016, v. 32, n. 5, p. 657, doi. 10.1093/bioinformatics/btv654
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- Publication type:
- Article
26
A hidden Markov random field-based Bayesian method for the detection of long-range chromosomal interactions in Hi-C data.
- Published in:
- Bioinformatics, 2016, v. 32, n. 5, p. 650, doi. 10.1093/bioinformatics/btv650
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- Publication type:
- Article
27
De novo identification of replication-timing domains in the human genome by deep learning.
- Published in:
- Bioinformatics, 2016, v. 32, n. 5, p. 641, doi. 10.1093/bioinformatics/btv643
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- Publication type:
- Article