Works matching IS 13674803 AND DT 2016 AND VI 32 AND IP 24

Results: 28

Corrigendum.

Published in:: 2016
Publication type:: Correction Notice

MSIdV: a versatile tool to visualize biological indices from mass spectrometry imaging data.

Published in:

Bioinformatics, 2016, v. 32, n. 24, p. 3852, doi. 10.1093/bioinformatics/btw548

By:

Eisuke Hayakawa;
Yoshinori Fujimura;
Daisuke Miura

Publication type:

Article

Almost Significant: simplifying quality control of high-throughput sequencing data.

Published in:

Bioinformatics, 2016, v. 32, n. 24, p. 3850, doi. 10.1093/bioinformatics/btw559

By:

Ward, Joseph;
Cole, Christian;
Febrer, Melanie;
Barton, Geoffrey J.

Publication type:

Article

PhenomeScape: a cytoscape app to identify differentially regulated sub-networks using known disease associations.

Published in:

Bioinformatics, 2016, v. 32, n. 24, p. 3847, doi. 10.1093/bioinformatics/btw545

By:

Soul, Jamie;
Dunn, Sara L.;
Hardingham, Tim E.;
Boot-Handford, Ray P.;
Schwartz, Jean-Marc

Publication type:

Article

DEsubs: an R package for flexible identification of differentially expressed subpathways using RNA-seq experiments.

Published in:

Bioinformatics, 2016, v. 32, n. 24, p. 3844, doi. 10.1093/bioinformatics/btw544

By:

Vrahatis, Aristidis G.;
Balomenos, Panos;
Tsakalidis, Athanasios K.;
Bezerianos, Anastasios

Publication type:

Article

ImmQuant: a user-friendly tool for inferring immune cell-type composition from gene-expression data.

Published in:

Bioinformatics, 2016, v. 32, n. 24, p. 3842, doi. 10.1093/bioinformatics/btw535

By:

Frishberg, Amit;
Brodt, Avital;
Steuerman, Yael;
Gat-Viks, Irit

Publication type:

Article

Discoal: flexible coalescent simulations with selection.

Published in:

Bioinformatics, 2016, v. 32, n. 24, p. 3839, doi. 10.1093/bioinformatics/btw556

By:

Kern, Andrew D.;
Schrider, Daniel R.

Publication type:

Article

BatchQC: interactive software for evaluating sample and batch effects in genomic data.

Published in:

Bioinformatics, 2016, v. 32, n. 24, p. 3836, doi. 10.1093/bioinformatics/btw538

By:

Manimaran, Solaiappan;
Selby, Heather Marie;
Okrah, Kwame;
Ruberman, Claire;
Leek, Jeffrey T.;
Quackenbush, John;
Haibe-Kains, Benjamin;
Bravo, Hector Corrada;
Johnson, W. Evan

Publication type:

Article

Integrating genomic information with protein sequence and 3D atomic level structure at the RCSB protein data bank.

Published in:

Bioinformatics, 2016, v. 32, n. 24, p. 3833, doi. 10.1093/bioinformatics/btw547

By:

Prlić, Andreas;
Kalro, Tara;
Bhattacharya, Roshni;
Christie, Cole;
Burley, Stephen K.;
Rose, Peter W.

Publication type:

Article

LongISLND: in silico sequencing of lengthy and noisy datatypes.

Published in:

Bioinformatics, 2016, v. 32, n. 24, p. 3829, doi. 10.1093/bioinformatics/btw602

By:

Bayo Lau;
Mohiyuddin, Marghoob;
Mu, John C.;
Li Tai Fang;
Asadi, Narges Bani;
Dallett, Carolina;
Lam, Hugo Y. K.

Publication type:

Article

MSAProbs-MPI: parallel multiple sequence aligner for distributed-memory systems.

Published in:

Bioinformatics, 2016, v. 32, n. 24, p. 3826, doi. 10.1093/bioinformatics/btw558

By:

González-Domínguez, Jorge;
Yongchao Liu;
Touriño, Juan;
Schmidt, Bertil

Publication type:

Article

Higher classification sensitivity of short metagenomic reads with CLARK-S.

Published in:

Bioinformatics, 2016, v. 32, n. 24, p. 3823, doi. 10.1093/bioinformatics/btw542

By:

Ounit, Rachid;
Lonardi, Stefano

Publication type:

Article

STAMS: STRING-assisted module search for genome wide association studies and application to autism.

Published in:

Bioinformatics, 2016, v. 32, n. 24, p. 3815, doi. 10.1093/bioinformatics/btw530

By:

Hillenmeyer, Sara;
Davis, Lea K.;
Gamazon, Eric R.;
Cook, Edwin H.;
Cox, Nancy J.;
Altman, Russ B.

Publication type:

Article

Fast-SNP: a fast matrix pre-processing algorithm for efficient loopless flux optimization of metabolic models.

Published in:

Bioinformatics, 2016, v. 32, n. 24, p. 3807, doi. 10.1093/bioinformatics/btw555

By:

Saa, Pedro A.;
Nielsen, Lars K.

Publication type:

Article

Virtual exploration of early stage atherosclerosis.

Published in:

Bioinformatics, 2016, v. 32, n. 24, p. 3798, doi. 10.1093/bioinformatics/btw551

By:

Olivares, Andy L.;
Ballester, Miguel A. González;
Noailly, Jérôme

Publication type:

Article

Selective mutation accumulation: a computational model of the paternal age effect.

Published in:

Bioinformatics, 2016, v. 32, n. 24, p. 3790, doi. 10.1093/bioinformatics/btw528

By:

Whelan, Eoin C.;
Nwala, Alexander C.;
Osgood, Christopher;
Olariu, Stephan

Publication type:

Article

Predicting synergistic effects between compounds through their structural similarity and effects on transcriptomes.

Published in:

Bioinformatics, 2016, v. 32, n. 24, p. 3782, doi. 10.1093/bioinformatics/btw509

By:

Yiyi Liu;
Hongyu Zhao

Publication type:

Article

KScons: a Bayesian approach for protein residue contact prediction using the knob-socket model of protein tertiary structure.

Published in:

Bioinformatics, 2016, v. 32, n. 24, p. 3774, doi. 10.1093/bioinformatics/btw553

By:

Qiwei Li;
Dahl, David B.;
Vannucci, Marina;
Hyun Joo;
Tsai, Jerry W.

Publication type:

Article

Predicting the errors of predicted local backbone angles and non-local solvent-accessibilities of proteins by deep neural networks.

Published in:

Bioinformatics, 2016, v. 32, n. 24, p. 3768, doi. 10.1093/bioinformatics/btw549

By:

Jianzhao Gao;
Yuedong Yang;
Yaoqi Zhou

Publication type:

Article

PPI4DOCK: large scale assessment of the use of homology models in free docking over more than 1000 realistic targets.

Published in:

Bioinformatics, 2016, v. 32, n. 24, p. 3760, doi. 10.1093/bioinformatics/btw533

By:

Jinchao Yu;
Guerois, Raphaël

Publication type:

Article

DOMINO: development of informative molecular markers for phylogenetic and genome-wide population genetic studies in non-model organisms.

Published in:

Bioinformatics, 2016, v. 32, n. 24, p. 3753, doi. 10.1093/bioinformatics/btw534

By:

Frías-López, Cristina;
Sánchez-Herrero, José F.;
Guirao-Rico, Sara;
Mora, Elisa;
Arnedo, Miquel A.;
Sánchez-Gracia, Alejandro;
Rozas, Julio

Publication type:

Article

Imbalanced multi-label learning for identifying antimicrobial peptides and their functional types.

Published in:

Bioinformatics, 2016, v. 32, n. 24, p. 3745, doi. 10.1093/bioinformatics/btw560

By:

Weizhong Lin;
Dong Xu

Publication type:

Article

H-PoP and H-PoPG: heuristic partitioning algorithms for single individual haplotyping of polyploids.

Published in:

Bioinformatics, 2016, v. 32, n. 24, p. 3735, doi. 10.1093/bioinformatics/btw537

By:

Minzhu Xie;
Qiong Wu;
Jianxin Wang;
Tao Jiang

Publication type:

Article

Assembly-based inference of B-cell receptor repertoires from short read RNA sequencing data with V'DJer.

Published in:

Bioinformatics, 2016, v. 32, n. 24, p. 3729, doi. 10.1093/bioinformatics/btw526

By:

Mose, Lisle E.;
Selitsky, Sara R.;
Bixby, Lisa M.;
Marron, David L.;
Iglesia, Michael D.;
Serody, Jonathan S.;
Perou, Charles M.;
Vincent, Benjamin G.;
Parker, Joel S.

Publication type:

Article

A new correlation clustering method for cancer mutation analysis.

Published in:

Bioinformatics, 2016, v. 32, n. 24, p. 3717, doi. 10.1093/bioinformatics/btw546

By:

Hou, Jack P.;
Emad, Amin;
Puleo, Gregory J.;
Jian Ma;
Milenkovic, Olgica

Publication type:

Article

CSAM: Compressed SAM format.

Published in:

Bioinformatics, 2016, v. 32, n. 24, p. 3709, doi. 10.1093/bioinformatics/btw543

By:

Cánovas, Rodrigo;
Moffat, Alistair;
Turpin, Andrew

Publication type:

Article

ReadXplorer 2--detailed read mapping analysis and visualization from one single source.

Published in:

Bioinformatics, 2016, v. 32, n. 24, p. 3702, doi. 10.1093/bioinformatics/btw541

By:

Hilker, Rolf;
Stadermann, Kai Bernd;
Schwengers, Oliver;
Anisiforov, Evgeny;
Jaenicke, Sebastian;
Weisshaar, Bernd;
Zimmermann, Tobias;
Goesmann, Alexander

Publication type:

Article

A computational strategy to adjust for copy number in tumor Hi-C data.

Published in:

Bioinformatics, 2016, v. 32, n. 24, p. 3695, doi. 10.1093/bioinformatics/btw540

By:

Hua-Jun Wu;
Michor, Franziska

Publication type:

Article